RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 VTCN1Q7Z7D3 282 aa21.56■■□□□ 1.04
PVT1-219ENST00000523427 GLB1L2Q8IW92 636 aa21.56■■□□□ 1.04
PVT1-219ENST00000523427 OFCC1Q8IZS5 231 aa21.56■■□□□ 1.04
PVT1-219ENST00000523427 LZICQ8WZA0 190 aa21.56■■□□□ 1.04
PVT1-219ENST00000523427 KIF17Q9P2E2 1029 aa21.56■■□□□ 1.04
PVT1-219ENST00000523427 RNF114Q9Y508 228 aa21.56■■□□□ 1.04
PVT1-219ENST00000523427 A0A087WUU8 490 aa21.55■■□□□ 1.04
PVT1-219ENST00000523427 MRASO14807 208 aa21.55■■□□□ 1.04
PVT1-219ENST00000523427 PHYHO14832 338 aa21.55■■□□□ 1.04
PVT1-219ENST00000523427 NDUFA7O95182 113 aa21.55■■□□□ 1.04
PVT1-219ENST00000523427 IFNW1P05000 195 aa21.55■■□□□ 1.04
PVT1-219ENST00000523427 KRR1Q13601 381 aaKnown RBP21.55■■□□□ 1.04
PVT1-219ENST00000523427 MEP1BQ16820 701 aa21.55■■□□□ 1.04
PVT1-219ENST00000523427 ZBED5Q49AG3 693 aa21.55■■□□□ 1.04
PVT1-219ENST00000523427 PRAMEF6Q5VXH4 476 aa21.55■■□□□ 1.04
PVT1-219ENST00000523427 ZNF620Q6ZNG0 422 aa21.55■■□□□ 1.04
PVT1-219ENST00000523427 DCDC5Q6ZRR9 648 aa21.55■■□□□ 1.04
PVT1-219ENST00000523427 OR11L1Q8NGX0 322 aa21.55■■□□□ 1.04
PVT1-219ENST00000523427 ACOT11Q8WXI4 607 aaPredicted RBP21.55■■□□□ 1.04
PVT1-219ENST00000523427 FAM71F1Q96KD3 344 aaPredicted RBP21.55■■□□□ 1.04
PVT1-219ENST00000523427 ATP6V1G3Q96LB4 118 aa21.55■■□□□ 1.04
PVT1-219ENST00000523427 RBM4BQ9BQ04 359 aaKnown RBP21.55■■□□□ 1.04
PVT1-219ENST00000523427 HCAR1Q9BXC0 346 aa21.55■■□□□ 1.04
PVT1-219ENST00000523427 RPS6KA6Q9UK32 745 aa21.55■■□□□ 1.04
PVT1-219ENST00000523427 IQCF6A8MYZ5 107 aa21.54■■□□□ 1.04
PVT1-219ENST00000523427 SOCS2O14508 198 aa21.54■■□□□ 1.04
PVT1-219ENST00000523427 FFAR1O14842 300 aa21.54■■□□□ 1.04
PVT1-219ENST00000523427 TOX4O94842 621 aa21.54■■□□□ 1.04
PVT1-219ENST00000523427 CFHR2P36980 270 aa21.54■■□□□ 1.04
PVT1-219ENST00000523427 LSM6P62312 80 aaKnown RBP21.54■■□□□ 1.04
PVT1-219ENST00000523427 SF3A3Q12874 501 aaKnown RBP eCLIP21.54■■□□□ 1.04
PVT1-219ENST00000523427 ZNF181Q2M3W8 571 aa21.54■■□□□ 1.04
PVT1-219ENST00000523427 SFRP4Q6FHJ7 346 aaPredicted RBP21.54■■□□□ 1.04
PVT1-219ENST00000523427 ASPHD2Q6ICH7 369 aa21.54■■□□□ 1.04
PVT1-219ENST00000523427 CORO6Q6QEF8 472 aa21.54■■□□□ 1.04
PVT1-219ENST00000523427 ZNF841Q6ZN19 808 aa21.54■■□□□ 1.04
PVT1-219ENST00000523427 RRM2BQ7LG56 351 aa21.54■■□□□ 1.04
PVT1-219ENST00000523427 FAM122BQ7Z309 247 aa21.54■■□□□ 1.04
PVT1-219ENST00000523427 OR2T12Q8NG77 320 aa21.54■■□□□ 1.04
PVT1-219ENST00000523427 AHCYL1O43865 530 aa21.53■■□□□ 1.04
PVT1-219ENST00000523427 FAM20BO75063 409 aa21.53■■□□□ 1.04
PVT1-219ENST00000523427 ZNF682O95780 498 aa21.53■■□□□ 1.04
PVT1-219ENST00000523427 BPIFB3P59826 476 aa21.53■■□□□ 1.04
PVT1-219ENST00000523427 MAB21L1Q13394 359 aa21.53■■□□□ 1.04
PVT1-219ENST00000523427 MBOAT2Q6ZWT7 520 aa21.53■■□□□ 1.04
PVT1-219ENST00000523427 STON2Q8WXE9 905 aa21.53■■□□□ 1.04
PVT1-219ENST00000523427 NUAK2Q9H093 628 aa21.53■■□□□ 1.04
PVT1-219ENST00000523427 CENPVL3A0A0U1RRI6 287 aa21.52■■□□□ 1.04
PVT1-219ENST00000523427 LOC100653049A0A140TA62 436 aa21.52■■□□□ 1.04
PVT1-219ENST00000523427 FAM220BPB1ANY3 271 aa21.52■■□□□ 1.04
PVT1-219ENST00000523427 J3QW42 95 aa21.52■■□□□ 1.04
PVT1-219ENST00000523427 KRT34O76011 436 aa21.52■■□□□ 1.04
PVT1-219ENST00000523427 PDCD1Q15116 288 aa21.52■■□□□ 1.04
PVT1-219ENST00000523427 MPPED2Q15777 294 aa21.52■■□□□ 1.04
PVT1-219ENST00000523427 PDZD9Q8IXQ8 264 aa21.52■■□□□ 1.04
PVT1-219ENST00000523427 RNF113BQ8IZP6 322 aaKnown RBP21.52■■□□□ 1.04
PVT1-219ENST00000523427 TMEM86BQ8N661 226 aa21.52■■□□□ 1.04
PVT1-219ENST00000523427 TBC1D15Q8TC07 691 aa21.52■■□□□ 1.04
PVT1-219ENST00000523427 SSMEM1Q8WWF3 244 aa21.52■■□□□ 1.04
PVT1-219ENST00000523427 GATAD2BQ8WXI9 593 aa21.52■■□□□ 1.04
PVT1-219ENST00000523427 FAM46AQ96IP4 442 aaKnown RBP21.52■■□□□ 1.04
PVT1-219ENST00000523427 TBX15Q96SF7 602 aa21.52■■□□□ 1.04
PVT1-219ENST00000523427 NDEL1Q9GZM8 345 aa21.52■■□□□ 1.04
PVT1-219ENST00000523427 RASSF4Q9H2L5 321 aa21.52■■□□□ 1.04
PVT1-219ENST00000523427 NMNAT1Q9HAN9 279 aaPredicted RBP21.52■■□□□ 1.04
PVT1-219ENST00000523427 GMPR2Q9P2T1 348 aaKnown RBP21.52■■□□□ 1.04
PVT1-219ENST00000523427 ERVK-18Q9QC07 812 aa21.52■■□□□ 1.04
PVT1-219ENST00000523427 ZNF879B4DU55 563 aa21.51■■□□□ 1.03
PVT1-219ENST00000523427 P2RY10O00398 339 aa21.51■■□□□ 1.03
PVT1-219ENST00000523427 TNFRSF13BO14836 293 aaPredicted RBP21.51■■□□□ 1.03
PVT1-219ENST00000523427 DBPQ10586 325 aaPredicted RBP21.51■■□□□ 1.03
PVT1-219ENST00000523427 TMPRSS11FQ6ZWK6 438 aa21.51■■□□□ 1.03
PVT1-219ENST00000523427 GJC3Q8NFK1 279 aa21.51■■□□□ 1.03
PVT1-219ENST00000523427 LHX4Q969G2 390 aa21.51■■□□□ 1.03
PVT1-219ENST00000523427 TSSK2Q96PF2 358 aa21.51■■□□□ 1.03
PVT1-219ENST00000523427 ACOXLQ9NUZ1 547 aa21.51■■□□□ 1.03
PVT1-219ENST00000523427 CTSZQ9UBR2 303 aa21.51■■□□□ 1.03
PVT1-219ENST00000523427 IER3IP1Q9Y5U9 82 aa21.51■■□□□ 1.03
PVT1-219ENST00000523427 LHFPL6Q9Y693 200 aa21.51■■□□□ 1.03
PVT1-219ENST00000523427 ELOVL7A1L3X0 281 aa21.5■■□□□ 1.03
PVT1-219ENST00000523427 C3orf80F5H4A9 247 aa21.5■■□□□ 1.03
PVT1-219ENST00000523427 F5H5K5 113 aa21.5■■□□□ 1.03
PVT1-219ENST00000523427 GPR137BO60478 399 aa21.5■■□□□ 1.03
PVT1-219ENST00000523427 IGHV4-59P01825 116 aa21.5■■□□□ 1.03
PVT1-219ENST00000523427 SDHAP31040 664 aa21.5■■□□□ 1.03
PVT1-219ENST00000523427 PSMB10P40306 273 aa21.5■■□□□ 1.03
PVT1-219ENST00000523427 TAF9Q16594 264 aa21.5■■□□□ 1.03
PVT1-219ENST00000523427 CLEC12AQ5QGZ9 265 aa21.5■■□□□ 1.03
PVT1-219ENST00000523427 METTL21CQ5VZV1 264 aa21.5■■□□□ 1.03
PVT1-219ENST00000523427 PTCHD4Q6ZW05 846 aa21.5■■□□□ 1.03
PVT1-219ENST00000523427 LINC01006Q8NI28 216 aa21.5■■□□□ 1.03
PVT1-219ENST00000523427 FAM110DQ8TAY7 271 aaPredicted RBP21.5■■□□□ 1.03
PVT1-219ENST00000523427 SLCO4A1Q96BD0 722 aa21.5■■□□□ 1.03
PVT1-219ENST00000523427 COQ7Q99807 217 aa21.5■■□□□ 1.03
PVT1-219ENST00000523427 TMEM120AQ9BXJ8 343 aa21.5■■□□□ 1.03
PVT1-219ENST00000523427 HDHD2Q9H0R4 259 aa21.5■■□□□ 1.03
PVT1-219ENST00000523427 TCF7L1Q9HCS4 588 aa21.5■■□□□ 1.03
PVT1-219ENST00000523427 ARMCX1Q9P291 453 aa21.5■■□□□ 1.03
PVT1-219ENST00000523427 POMT1Q9Y6A1 747 aa21.5■■□□□ 1.03
PVT1-219ENST00000523427 ADAM20O43506 726 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms