RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 GMNCA6NCL1 334 aa11.23□□□□□ -0.61
NKX3-1-202ENST00000523261 OOEPA6NGQ2 149 aa11.23□□□□□ -0.61
NKX3-1-202ENST00000523261 C12orf71A8MTZ7 269 aa11.23□□□□□ -0.61
NKX3-1-202ENST00000523261 J3QW42 95 aa11.23□□□□□ -0.61
NKX3-1-202ENST00000523261 CHP2O43745 196 aa11.23□□□□□ -0.61
NKX3-1-202ENST00000523261 LYPD3O95274 346 aa11.23□□□□□ -0.61
NKX3-1-202ENST00000523261 ZCCHC18P0CG32 403 aa11.23□□□□□ -0.61
NKX3-1-202ENST00000523261 UMPSP11172 480 aa11.23□□□□□ -0.61
NKX3-1-202ENST00000523261 BMXP51813 675 aa11.23□□□□□ -0.61
NKX3-1-202ENST00000523261 AANATQ16613 207 aa11.23□□□□□ -0.61
NKX3-1-202ENST00000523261 INTS11Q5TA45 600 aaKnown RBP11.23□□□□□ -0.61
NKX3-1-202ENST00000523261 HHATQ5VTY9 493 aa11.23□□□□□ -0.61
NKX3-1-202ENST00000523261 ZNF613Q6PF04 617 aa11.23□□□□□ -0.61
NKX3-1-202ENST00000523261 FAM90A1Q86YD7 464 aa11.23□□□□□ -0.61
NKX3-1-202ENST00000523261 PCYOX1LQ8NBM8 494 aa11.23□□□□□ -0.61
NKX3-1-202ENST00000523261 RASD2Q96D21 266 aa11.23□□□□□ -0.61
NKX3-1-202ENST00000523261 ZNF583Q96ND8 569 aa11.23□□□□□ -0.61
NKX3-1-202ENST00000523261 STX18Q9P2W9 335 aaKnown RBP11.23□□□□□ -0.61
NKX3-1-202ENST00000523261 KAAG1Q9UBP8 84 aa11.23□□□□□ -0.61
NKX3-1-202ENST00000523261 HERC2O95714 4834 aa11.23□□□□□ -0.61
NKX3-1-202ENST00000523261 KPNA4O00629 521 aaPredicted RBP11.22□□□□□ -0.61
NKX3-1-202ENST00000523261 SGCEO43556 437 aa11.22□□□□□ -0.61
NKX3-1-202ENST00000523261 SCG5P05408 212 aa11.22□□□□□ -0.61
NKX3-1-202ENST00000523261 BMP2P12643 396 aa11.22□□□□□ -0.61
NKX3-1-202ENST00000523261 NR2C1P13056 603 aa11.22□□□□□ -0.61
NKX3-1-202ENST00000523261 LBPP18428 481 aa11.22□□□□□ -0.61
NKX3-1-202ENST00000523261 MSR1P21757 451 aa11.22□□□□□ -0.61
NKX3-1-202ENST00000523261 PAX6P26367 422 aa11.22□□□□□ -0.61
NKX3-1-202ENST00000523261 LINC00482Q8N8I6 264 aa11.22□□□□□ -0.61
NKX3-1-202ENST00000523261 C8orf46Q8TAG6 207 aa11.22□□□□□ -0.61
NKX3-1-202ENST00000523261 PIFOQ8TCI5 191 aa11.22□□□□□ -0.61
NKX3-1-202ENST00000523261 CDCA4Q9BXL8 241 aa11.22□□□□□ -0.61
NKX3-1-202ENST00000523261 INIPQ9NRY2 104 aa11.22□□□□□ -0.61
NKX3-1-202ENST00000523261 STARD9Q9P2P6 4700 aa11.22□□□□□ -0.61
NKX3-1-202ENST00000523261 A0A1B0GW55 424 aa11.21□□□□□ -0.61
NKX3-1-202ENST00000523261 A0A1W2PPL8 197 aa11.21□□□□□ -0.61
NKX3-1-202ENST00000523261 C5orf58C9J3I9 102 aa11.21□□□□□ -0.61
NKX3-1-202ENST00000523261 PEX14O75381 377 aa11.21□□□□□ -0.61
NKX3-1-202ENST00000523261 THY1P04216 161 aa11.21□□□□□ -0.61
NKX3-1-202ENST00000523261 ALDOCP09972 364 aaKnown RBP11.21□□□□□ -0.61
NKX3-1-202ENST00000523261 CCDC159P0C7I6 412 aa11.21□□□□□ -0.61
NKX3-1-202ENST00000523261 DUX4L2P0CJ85 424 aa11.21□□□□□ -0.61
NKX3-1-202ENST00000523261 DUX4L3P0CJ86 424 aa11.21□□□□□ -0.61
NKX3-1-202ENST00000523261 DUX4L4P0CJ87 422 aa11.21□□□□□ -0.61
NKX3-1-202ENST00000523261 DUX4L5P0CJ88 424 aa11.21□□□□□ -0.61
NKX3-1-202ENST00000523261 DUX4L6P0CJ89 424 aa11.21□□□□□ -0.61
NKX3-1-202ENST00000523261 DUX4L7P0CJ90 424 aa11.21□□□□□ -0.61
NKX3-1-202ENST00000523261 BGNP21810 368 aa11.21□□□□□ -0.61
NKX3-1-202ENST00000523261 AQP2P41181 271 aa11.21□□□□□ -0.61
NKX3-1-202ENST00000523261 GUCA1AP43080 201 aaPredicted RBP11.21□□□□□ -0.61
NKX3-1-202ENST00000523261 SCRN3Q0VDG4 424 aa11.21□□□□□ -0.61
NKX3-1-202ENST00000523261 RGNQ15493 299 aa11.21□□□□□ -0.61
NKX3-1-202ENST00000523261 TCTEX1D4Q5JR98 221 aa11.21□□□□□ -0.61
NKX3-1-202ENST00000523261 TTC33Q6PID6 262 aaPredicted RBP11.21□□□□□ -0.61
NKX3-1-202ENST00000523261 DUX4L9Q6RFH8 374 aaPredicted RBP11.21□□□□□ -0.61
NKX3-1-202ENST00000523261 OR5L1Q8NGL2 311 aa11.21□□□□□ -0.61
NKX3-1-202ENST00000523261 MCHR1Q99705 422 aa11.21□□□□□ -0.61
NKX3-1-202ENST00000523261 ZNF426Q9BUY5 554 aa11.21□□□□□ -0.61
NKX3-1-202ENST00000523261 ALG12Q9BV10 488 aa11.21□□□□□ -0.61
NKX3-1-202ENST00000523261 EMC7Q9NPA0 242 aa11.21□□□□□ -0.61
NKX3-1-202ENST00000523261 POLE4Q9NR33 117 aa11.21□□□□□ -0.61
NKX3-1-202ENST00000523261 DUX4Q9UBX2 424 aa11.21□□□□□ -0.61
NKX3-1-202ENST00000523261 PCLOQ9Y6V0 5065 aa11.2□□□□□ -0.62
NKX3-1-202ENST00000523261 NPIPB13A6NJU9 1138 aa11.2□□□□□ -0.62
NKX3-1-202ENST00000523261 NPIPB4C9JG80 1138 aa11.2□□□□□ -0.62
NKX3-1-202ENST00000523261 H0YHG0 523 aa11.2□□□□□ -0.62
NKX3-1-202ENST00000523261 ANP32DO95626 131 aa11.2□□□□□ -0.62
NKX3-1-202ENST00000523261 PTBP3O95758 552 aaKnown RBP11.2□□□□□ -0.62
NKX3-1-202ENST00000523261 LHBP01229 141 aa11.2□□□□□ -0.62
NKX3-1-202ENST00000523261 IFNW1P05000 195 aa11.2□□□□□ -0.62
NKX3-1-202ENST00000523261 DBHP09172 617 aa11.2□□□□□ -0.62
NKX3-1-202ENST00000523261 PRSS12P56730 875 aa11.2□□□□□ -0.62
NKX3-1-202ENST00000523261 POU4F2Q12837 409 aa11.2□□□□□ -0.62
NKX3-1-202ENST00000523261 NCR3LG1Q68D85 454 aa11.2□□□□□ -0.62
NKX3-1-202ENST00000523261 ZFAND6Q6FIF0 208 aa11.2□□□□□ -0.62
NKX3-1-202ENST00000523261 HCP5Q6MZN7 132 aa11.2□□□□□ -0.62
NKX3-1-202ENST00000523261 ADAMTSL5Q6ZMM2 481 aa11.2□□□□□ -0.62
NKX3-1-202ENST00000523261 CCDC121Q6ZUS5 278 aa11.2□□□□□ -0.62
NKX3-1-202ENST00000523261 OR5AU1Q8NGC0 362 aa11.2□□□□□ -0.62
NKX3-1-202ENST00000523261 MOSPD2Q8NHP6 518 aa11.2□□□□□ -0.62
NKX3-1-202ENST00000523261 NFKBIDQ8NI38 313 aa11.2□□□□□ -0.62
NKX3-1-202ENST00000523261 AENQ8WTP8 325 aaKnown RBP11.2□□□□□ -0.62
NKX3-1-202ENST00000523261 RBP7Q96R05 134 aa11.2□□□□□ -0.62
NKX3-1-202ENST00000523261 CPPED1Q9BRF8 314 aaPredicted RBP11.2□□□□□ -0.62
NKX3-1-202ENST00000523261 WACQ9BTA9 647 aa11.2□□□□□ -0.62
NKX3-1-202ENST00000523261 SPATA5L1Q9BVQ7 753 aa11.2□□□□□ -0.62
NKX3-1-202ENST00000523261 MUC13Q9H3R2 512 aa11.2□□□□□ -0.62
NKX3-1-202ENST00000523261 MEPEQ9NQ76 525 aaPredicted RBP11.2□□□□□ -0.62
NKX3-1-202ENST00000523261 AIG1Q9NVV5 245 aa11.2□□□□□ -0.62
NKX3-1-202ENST00000523261 ANGPT4Q9Y264 503 aa11.2□□□□□ -0.62
NKX3-1-202ENST00000523261 OR6C6A6NF89 314 aa11.19□□□□□ -0.62
NKX3-1-202ENST00000523261 CLIC3O95833 236 aa11.19□□□□□ -0.62
NKX3-1-202ENST00000523261 ELF3P78545 371 aaPredicted RBP11.19□□□□□ -0.62
NKX3-1-202ENST00000523261 DGCR2P98153 550 aa11.19□□□□□ -0.62
NKX3-1-202ENST00000523261 FADDQ13158 208 aa11.19□□□□□ -0.62
NKX3-1-202ENST00000523261 TMEM95Q3KNT9 176 aa11.19□□□□□ -0.62
NKX3-1-202ENST00000523261 BEND6Q5SZJ8 279 aaPredicted RBP11.19□□□□□ -0.62
NKX3-1-202ENST00000523261 OGFOD2Q6N063 350 aa11.19□□□□□ -0.62
NKX3-1-202ENST00000523261 Q6ZS46 218 aa11.19□□□□□ -0.62
NKX3-1-202ENST00000523261 KRT73Q86Y46 540 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms