RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 CDCA4Q9BXL8 241 aa20.9■□□□□ 0.94
PVT1-212ENST00000521951 NIPAL2Q9H841 368 aa20.9■□□□□ 0.94
PVT1-212ENST00000521951 KCNN3Q9UGI6 736 aa20.9■□□□□ 0.94
PVT1-212ENST00000521951 GNG8Q9UK08 70 aa20.9■□□□□ 0.94
PVT1-212ENST00000521951 J3QLW9 94 aa20.89■□□□□ 0.94
PVT1-212ENST00000521951 ABCD4O14678 606 aa20.89■□□□□ 0.94
PVT1-212ENST00000521951 ZNF19P17023 458 aa20.89■□□□□ 0.94
PVT1-212ENST00000521951 ACTA2P62736 377 aa20.89■□□□□ 0.94
PVT1-212ENST00000521951 ACTG2P63267 376 aa20.89■□□□□ 0.94
PVT1-212ENST00000521951 PRSS48Q7RTY5 328 aa20.89■□□□□ 0.94
PVT1-212ENST00000521951 KCTD20Q7Z5Y7 419 aa20.89■□□□□ 0.94
PVT1-212ENST00000521951 ZNF283Q8N7M2 679 aa20.89■□□□□ 0.94
PVT1-212ENST00000521951 PIK3IP1Q96FE7 263 aa20.89■□□□□ 0.94
PVT1-212ENST00000521951 C4orf36Q96KX1 117 aa20.89■□□□□ 0.94
PVT1-212ENST00000521951 CCDC90BQ9GZT6 254 aa20.89■□□□□ 0.94
PVT1-212ENST00000521951 ISG20L2Q9H9L3 353 aaKnown RBP20.89■□□□□ 0.94
PVT1-212ENST00000521951 CAB39Q9Y376 341 aaPredicted RBP20.89■□□□□ 0.94
PVT1-212ENST00000521951 COL8A1P27658 744 aa20.88■□□□□ 0.93
PVT1-212ENST00000521951 DCTDP32321 178 aa20.88■□□□□ 0.93
PVT1-212ENST00000521951 WNT5AP41221 380 aa20.88■□□□□ 0.93
PVT1-212ENST00000521951 CX3CR1P49238 355 aa20.88■□□□□ 0.93
PVT1-212ENST00000521951 IRF3Q14653 427 aa20.88■□□□□ 0.93
PVT1-212ENST00000521951 KCTD21Q4G0X4 260 aa20.88■□□□□ 0.93
PVT1-212ENST00000521951 OR2G6Q5TZ20 316 aa20.88■□□□□ 0.93
PVT1-212ENST00000521951 LIPNQ5VXI9 398 aa20.88■□□□□ 0.93
PVT1-212ENST00000521951 SYS1Q8N2H4 156 aa20.88■□□□□ 0.93
PVT1-212ENST00000521951 KLHL36Q8N4N3 616 aa20.88■□□□□ 0.93
PVT1-212ENST00000521951 C4orf45Q96LM5 186 aa20.88■□□□□ 0.93
PVT1-212ENST00000521951 TRIM64A6NGJ6 449 aa20.88■□□□□ 0.93
PVT1-212ENST00000521951 TNFAIP8O95379 198 aa20.88■□□□□ 0.93
PVT1-212ENST00000521951 CD3EP07766 207 aa20.88■□□□□ 0.93
PVT1-212ENST00000521951 TACSTD2P09758 323 aa20.88■□□□□ 0.93
PVT1-212ENST00000521951 COX6B1P14854 86 aa20.88■□□□□ 0.93
PVT1-212ENST00000521951 NR1H2P55055 460 aa20.88■□□□□ 0.93
PVT1-212ENST00000521951 CDH15P55291 814 aa20.88■□□□□ 0.93
PVT1-212ENST00000521951 DRAM2Q6UX65 266 aa20.88■□□□□ 0.93
PVT1-212ENST00000521951 TMPRSS11AQ6ZMR5 421 aa20.88■□□□□ 0.93
PVT1-212ENST00000521951 FAM220AQ7Z4H9 259 aa20.88■□□□□ 0.93
PVT1-212ENST00000521951 EGFL6Q8IUX8 553 aa20.88■□□□□ 0.93
PVT1-212ENST00000521951 NANOGP1Q8N7R0 232 aa20.88■□□□□ 0.93
PVT1-212ENST00000521951 RADILQ96JH8 1075 aa20.88■□□□□ 0.93
PVT1-212ENST00000521951 NR1H4Q96RI1 486 aaPredicted RBP20.88■□□□□ 0.93
PVT1-212ENST00000521951 ACOXLQ9NUZ1 547 aa20.88■□□□□ 0.93
PVT1-212ENST00000521951 ABCA4P78363 2273 aa20.87■□□□□ 0.93
PVT1-212ENST00000521951 TMEM129A0AVI4 362 aa20.87■□□□□ 0.93
PVT1-212ENST00000521951 ATP6V1G2-DDX39BF2Z307 99 aa20.87■□□□□ 0.93
PVT1-212ENST00000521951 RPP14O95059 124 aaKnown RBP20.87■□□□□ 0.93
PVT1-212ENST00000521951 APOC1P02654 83 aa20.87■□□□□ 0.93
PVT1-212ENST00000521951 PCSK6P29122 969 aa20.87■□□□□ 0.93
PVT1-212ENST00000521951 SLC6A9P48067 706 aa20.87■□□□□ 0.93
PVT1-212ENST00000521951 OR52N1Q8NH53 320 aa20.87■□□□□ 0.93
PVT1-212ENST00000521951 SPRYD4Q8WW59 207 aaPredicted RBP20.87■□□□□ 0.93
PVT1-212ENST00000521951 HS3ST6Q96QI5 342 aa20.87■□□□□ 0.93
PVT1-212ENST00000521951 DOK1Q99704 481 aa20.87■□□□□ 0.93
PVT1-212ENST00000521951 EIF3KQ9UBQ5 218 aaKnown RBP20.87■□□□□ 0.93
PVT1-212ENST00000521951 PLEKHB1Q9UF11 243 aaPredicted RBP20.87■□□□□ 0.93
PVT1-212ENST00000521951 ERGIC3Q9Y282 383 aa20.87■□□□□ 0.93
PVT1-212ENST00000521951 A6NNC1 897 aa20.86■□□□□ 0.93
PVT1-212ENST00000521951 ICMTO60725 284 aa20.86■□□□□ 0.93
PVT1-212ENST00000521951 MRPS14O60783 128 aaKnown RBP20.86■□□□□ 0.93
PVT1-212ENST00000521951 SRSF10O75494 262 aaKnown RBP20.86■□□□□ 0.93
PVT1-212ENST00000521951 SLC2A1P11166 492 aa20.86■□□□□ 0.93
PVT1-212ENST00000521951 ZNF121P58317 390 aaPredicted RBP20.86■□□□□ 0.93
PVT1-212ENST00000521951 PSMA6P60900 246 aaKnown RBP20.86■□□□□ 0.93
PVT1-212ENST00000521951 ARL9Q6T311 187 aa20.86■□□□□ 0.93
PVT1-212ENST00000521951 SLC22A25Q6T423 547 aa20.86■□□□□ 0.93
PVT1-212ENST00000521951 ZNF101Q8IZC7 436 aa20.86■□□□□ 0.93
PVT1-212ENST00000521951 RNF166Q96A37 237 aaPredicted RBP20.86■□□□□ 0.93
PVT1-212ENST00000521951 PELI1Q96FA3 418 aa20.86■□□□□ 0.93
PVT1-212ENST00000521951 C1QTNF5Q9BXJ0 243 aa20.86■□□□□ 0.93
PVT1-212ENST00000521951 OR51B6Q9H340 312 aa20.86■□□□□ 0.93
PVT1-212ENST00000521951 BRD7Q9NPI1 651 aa20.86■□□□□ 0.93
PVT1-212ENST00000521951 RNF115Q9Y4L5 304 aa20.86■□□□□ 0.93
PVT1-212ENST00000521951 TMEM269A0A1B0GVZ9 245 aa20.85■□□□□ 0.93
PVT1-212ENST00000521951 MYL12BO14950 172 aa20.85■□□□□ 0.93
PVT1-212ENST00000521951 PNPP00491 289 aa20.85■□□□□ 0.93
PVT1-212ENST00000521951 PLAUP00749 431 aa20.85■□□□□ 0.93
PVT1-212ENST00000521951 NGFP01138 241 aa20.85■□□□□ 0.93
PVT1-212ENST00000521951 MT-ND5P03915 603 aa20.85■□□□□ 0.93
PVT1-212ENST00000521951 LCATP04180 440 aa20.85■□□□□ 0.93
PVT1-212ENST00000521951 FAM157BP0CG42 384 aa20.85■□□□□ 0.93
PVT1-212ENST00000521951 NR4A1P22736 598 aa20.85■□□□□ 0.93
PVT1-212ENST00000521951 ANOS1P23352 680 aa20.85■□□□□ 0.93
PVT1-212ENST00000521951 PSMB10P40306 273 aa20.85■□□□□ 0.93
PVT1-212ENST00000521951 UCP2P55851 309 aa20.85■□□□□ 0.93
PVT1-212ENST00000521951 ZNF829Q3KNS6 432 aaPredicted RBP20.85■□□□□ 0.93
PVT1-212ENST00000521951 ADAM5Q6NVV9 412 aa20.85■□□□□ 0.93
PVT1-212ENST00000521951 COLCA1Q6ZS62 124 aa20.85■□□□□ 0.93
PVT1-212ENST00000521951 PRSS45Q7RTY3 260 aa20.85■□□□□ 0.93
PVT1-212ENST00000521951 ZNF485Q8NCK3 441 aa20.85■□□□□ 0.93
PVT1-212ENST00000521951 GATAD2BQ8WXI9 593 aa20.85■□□□□ 0.93
PVT1-212ENST00000521951 RORBQ92753 470 aa20.85■□□□□ 0.93
PVT1-212ENST00000521951 TMEM204Q9BSN7 226 aa20.85■□□□□ 0.93
PVT1-212ENST00000521951 TBCCD1Q9NVR7 557 aa20.85■□□□□ 0.93
PVT1-212ENST00000521951 FAM206AQ9NX38 181 aa20.85■□□□□ 0.93
PVT1-212ENST00000521951 N6AMT1Q9Y5N5 214 aa20.85■□□□□ 0.93
PVT1-212ENST00000521951 R4GMQ9 66 aa20.85■□□□□ 0.93
PVT1-212ENST00000521951 SHISA9B4DS77 424 aa20.84■□□□□ 0.93
PVT1-212ENST00000521951 ANXA2P07355 339 aaKnown RBP20.84■□□□□ 0.93
PVT1-212ENST00000521951 RGS6P49758 472 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms