RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 IFI44LQ53G44 452 aa12.42□□□□□ -0.42
PRKDC-204ENST00000521331 GPR157Q5UAW9 335 aa12.42□□□□□ -0.42
PRKDC-204ENST00000521331 TBPL2Q6SJ96 375 aa12.42□□□□□ -0.42
PRKDC-204ENST00000521331 DCDC5Q6ZRR9 648 aa12.42□□□□□ -0.42
PRKDC-204ENST00000521331 FITM2Q8N6M3 262 aa12.42□□□□□ -0.42
PRKDC-204ENST00000521331 CELF2-AS1Q8N7Q2 184 aa12.42□□□□□ -0.42
PRKDC-204ENST00000521331 GJC3Q8NFK1 279 aa12.42□□□□□ -0.42
PRKDC-204ENST00000521331 WFDC12Q8WWY7 111 aa12.42□□□□□ -0.42
PRKDC-204ENST00000521331 ERGIC1Q969X5 290 aa12.42□□□□□ -0.42
PRKDC-204ENST00000521331 GPX7Q96SL4 187 aaPredicted RBP12.42□□□□□ -0.42
PRKDC-204ENST00000521331 HCAR1Q9BXC0 346 aa12.42□□□□□ -0.42
PRKDC-204ENST00000521331 HDHD2Q9H0R4 259 aa12.42□□□□□ -0.42
PRKDC-204ENST00000521331 TMEM100Q9NV29 134 aa12.42□□□□□ -0.42
PRKDC-204ENST00000521331 NOTCH1P46531 2555 aa12.41□□□□□ -0.42
PRKDC-204ENST00000521331 A0A1B0GWJ7 208 aa12.41□□□□□ -0.42
PRKDC-204ENST00000521331 FAM181BA6NEQ2 426 aa12.41□□□□□ -0.42
PRKDC-204ENST00000521331 MLNRO43193 412 aa12.41□□□□□ -0.42
PRKDC-204ENST00000521331 ENSAO43768 121 aaKnown RBP12.41□□□□□ -0.42
PRKDC-204ENST00000521331 ZNF682O95780 498 aa12.41□□□□□ -0.42
PRKDC-204ENST00000521331 RAG2P55895 527 aa12.41□□□□□ -0.42
PRKDC-204ENST00000521331 FGF12P61328 243 aa12.41□□□□□ -0.42
PRKDC-204ENST00000521331 OTPQ5XKR4 325 aa12.41□□□□□ -0.42
PRKDC-204ENST00000521331 WDR25Q64LD2 544 aaPredicted RBP12.41□□□□□ -0.42
PRKDC-204ENST00000521331 DNM1P34Q6PK57 102 aa12.41□□□□□ -0.42
PRKDC-204ENST00000521331 BRD3OSQ6XYD6 125 aa12.41□□□□□ -0.42
PRKDC-204ENST00000521331 ARPINQ7Z6K5 226 aa12.41□□□□□ -0.42
PRKDC-204ENST00000521331 CYP4Z1Q86W10 505 aa12.41□□□□□ -0.42
PRKDC-204ENST00000521331 TMEM86BQ8N661 226 aa12.41□□□□□ -0.42
PRKDC-204ENST00000521331 BHLHE23Q8NDY6 225 aa12.41□□□□□ -0.42
PRKDC-204ENST00000521331 Q8TCH9 128 aa12.41□□□□□ -0.42
PRKDC-204ENST00000521331 NUAK2Q9H093 628 aa12.41□□□□□ -0.42
PRKDC-204ENST00000521331 NRIP3Q9NQ35 241 aa12.41□□□□□ -0.42
PRKDC-204ENST00000521331 SAR1AQ9NR31 198 aa12.41□□□□□ -0.42
PRKDC-204ENST00000521331 KIF17Q9P2E2 1029 aa12.41□□□□□ -0.42
PRKDC-204ENST00000521331 SIGLEC7Q9Y286 467 aa12.41□□□□□ -0.42
PRKDC-204ENST00000521331 IGHV3-64DA0A0J9YX35 117 aa12.4□□□□□ -0.42
PRKDC-204ENST00000521331 LOC100653049A0A140TA62 436 aa12.4□□□□□ -0.42
PRKDC-204ENST00000521331 KRT34O76011 436 aa12.4□□□□□ -0.42
PRKDC-204ENST00000521331 NDUFA7O95182 113 aa12.4□□□□□ -0.42
PRKDC-204ENST00000521331 TROVE2P10155 538 aaKnown RBP eCLIP12.4□□□□□ -0.42
PRKDC-204ENST00000521331 FPR3P25089 353 aa12.4□□□□□ -0.42
PRKDC-204ENST00000521331 CRABP1P29762 137 aa12.4□□□□□ -0.42
PRKDC-204ENST00000521331 PMELP40967 661 aa12.4□□□□□ -0.42
PRKDC-204ENST00000521331 NPY4RP50391 375 aa12.4□□□□□ -0.42
PRKDC-204ENST00000521331 HIST1H3AP68431 136 aa12.4□□□□□ -0.42
PRKDC-204ENST00000521331 FAM201AQ5SY85 155 aa12.4□□□□□ -0.42
PRKDC-204ENST00000521331 HIST2H3PS2Q5TEC6 136 aa12.4□□□□□ -0.42
PRKDC-204ENST00000521331 OLFML2AQ68BL7 652 aa12.4□□□□□ -0.42
PRKDC-204ENST00000521331 FIP1L1Q6UN15 594 aaKnown RBP12.4□□□□□ -0.42
PRKDC-204ENST00000521331 Q6YL49 198 aa12.4□□□□□ -0.42
PRKDC-204ENST00000521331 COLCA1Q6ZS62 124 aa12.4□□□□□ -0.42
PRKDC-204ENST00000521331 HIST2H3AQ71DI3 136 aa12.4□□□□□ -0.42
PRKDC-204ENST00000521331 FKBP9P1Q75LS8 142 aa12.4□□□□□ -0.42
PRKDC-204ENST00000521331 CBLL1Q75N03 491 aa12.4□□□□□ -0.42
PRKDC-204ENST00000521331 KIR3DL3Q8N743 410 aa12.4□□□□□ -0.42
PRKDC-204ENST00000521331 OR11L1Q8NGX0 322 aa12.4□□□□□ -0.42
PRKDC-204ENST00000521331 FAM46AQ96IP4 442 aaKnown RBP12.4□□□□□ -0.42
PRKDC-204ENST00000521331 FAM71F1Q96KD3 344 aaPredicted RBP12.4□□□□□ -0.42
PRKDC-204ENST00000521331 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.4□□□□□ -0.42
PRKDC-204ENST00000521331 POMT1Q9Y6A1 747 aa12.4□□□□□ -0.42
PRKDC-204ENST00000521331 VWFP04275 2813 aa12.39□□□□□ -0.43
PRKDC-204ENST00000521331 A0A0G2JK05 382 aa12.39□□□□□ -0.43
PRKDC-204ENST00000521331 M0QZ24 198 aa12.39□□□□□ -0.43
PRKDC-204ENST00000521331 CXCR6O00574 342 aa12.39□□□□□ -0.43
PRKDC-204ENST00000521331 SOCS2O14508 198 aa12.39□□□□□ -0.43
PRKDC-204ENST00000521331 PTP4A3O75365 173 aa12.39□□□□□ -0.43
PRKDC-204ENST00000521331 TXNDC12O95881 172 aa12.39□□□□□ -0.43
PRKDC-204ENST00000521331 RPS6KA3P51812 740 aa12.39□□□□□ -0.43
PRKDC-204ENST00000521331 RPL15P61313 204 aaKnown RBP12.39□□□□□ -0.43
PRKDC-204ENST00000521331 KCNJ8Q15842 424 aa12.39□□□□□ -0.43
PRKDC-204ENST00000521331 CD276Q5ZPR3 534 aa12.39□□□□□ -0.43
PRKDC-204ENST00000521331 ZNF841Q6ZN19 808 aa12.39□□□□□ -0.43
PRKDC-204ENST00000521331 DPY19L2P2Q6ZN68 376 aa12.39□□□□□ -0.43
PRKDC-204ENST00000521331 SLC7A13Q8TCU3 470 aa12.39□□□□□ -0.43
PRKDC-204ENST00000521331 HSH2DQ96JZ2 352 aa12.39□□□□□ -0.43
PRKDC-204ENST00000521331 CITED1Q99966 193 aa12.39□□□□□ -0.43
PRKDC-204ENST00000521331 CDADC1Q9BWV3 514 aa12.39□□□□□ -0.43
PRKDC-204ENST00000521331 MARCH7Q9H992 704 aa12.39□□□□□ -0.43
PRKDC-204ENST00000521331 CMTM6Q9NX76 183 aa12.39□□□□□ -0.43
PRKDC-204ENST00000521331 NOP16Q9Y3C1 178 aaKnown RBP12.39□□□□□ -0.43
PRKDC-204ENST00000521331 IER3IP1Q9Y5U9 82 aa12.39□□□□□ -0.43
PRKDC-204ENST00000521331 LHFPL6Q9Y693 200 aa12.39□□□□□ -0.43
PRKDC-204ENST00000521331 A0A1W2PRQ8 180 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 CLPSL1A2RUU4 121 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 C22orf46C9J442 243 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 P2RY10O00398 339 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 IMPA2O14732 288 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 GSTA4O15217 222 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 HLA-DPB1P04440 258 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 LIPFP07098 398 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 PSMB10P40306 273 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 CD200P41217 278 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 CENPAP49450 140 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 LIPEQ05469 1076 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 COX10Q12887 443 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 ECH1Q13011 328 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 MALLQ13021 153 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 MAB21L1Q13394 359 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 DGCR6Q14129 220 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 PDCD1Q15116 288 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms