RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 ATPIF1Q9UII2 106 aa16.96■□□□□ 0.31
PABPC1-217ENST00000521067 LRCH1Q9Y2L9 728 aa16.96■□□□□ 0.31
PABPC1-217ENST00000521067 IGLV1-36A0A0B4J1U3 117 aa16.95■□□□□ 0.3
PABPC1-217ENST00000521067 A0A1B0GWJ7 208 aa16.95■□□□□ 0.3
PABPC1-217ENST00000521067 UNC119BA6NIH7 251 aa16.95■□□□□ 0.3
PABPC1-217ENST00000521067 IQCF6A8MYZ5 107 aa16.95■□□□□ 0.3
PABPC1-217ENST00000521067 HLA-DPB1P04440 258 aa16.95■□□□□ 0.3
PABPC1-217ENST00000521067 RNASE1P07998 156 aaKnown RBP16.95■□□□□ 0.3
PABPC1-217ENST00000521067 CENPAP49450 140 aa16.95■□□□□ 0.3
PABPC1-217ENST00000521067 HOXA4Q00056 320 aaPredicted RBP16.95■□□□□ 0.3
PABPC1-217ENST00000521067 KRTAP27-1Q3LI81 207 aa16.95■□□□□ 0.3
PABPC1-217ENST00000521067 NAA40Q86UY6 237 aa16.95■□□□□ 0.3
PABPC1-217ENST00000521067 GJC3Q8NFK1 279 aa16.95■□□□□ 0.3
PABPC1-217ENST00000521067 OR5L1Q8NGL2 311 aa16.95■□□□□ 0.3
PABPC1-217ENST00000521067 OR52J3Q8NH60 311 aa16.95■□□□□ 0.3
PABPC1-217ENST00000521067 APOBEC3DQ96AK3 386 aaPredicted RBP16.95■□□□□ 0.3
PABPC1-217ENST00000521067 COQ7Q99807 217 aa16.95■□□□□ 0.3
PABPC1-217ENST00000521067 MS4A7Q9GZW8 240 aaPredicted RBP16.95■□□□□ 0.3
PABPC1-217ENST00000521067 ZNF696Q9H7X3 374 aa16.95■□□□□ 0.3
PABPC1-217ENST00000521067 UNKLQ9H9P5 680 aaKnown RBP16.95■□□□□ 0.3
PABPC1-217ENST00000521067 EFCAB1Q9HAE3 211 aa16.95■□□□□ 0.3
PABPC1-217ENST00000521067 SRA1Q9HD15 236 aaKnown RBP16.95■□□□□ 0.3
PABPC1-217ENST00000521067 RPS6KA6Q9UK32 745 aa16.95■□□□□ 0.3
PABPC1-217ENST00000521067 B9D1Q9UPM9 204 aa16.95■□□□□ 0.3
PABPC1-217ENST00000521067 IGHV2-70DA0A0C4DH43 119 aa16.94■□□□□ 0.3
PABPC1-217ENST00000521067 IFNL4K9M1U5 179 aa16.94■□□□□ 0.3
PABPC1-217ENST00000521067 PPP1R3DO95685 299 aa16.94■□□□□ 0.3
PABPC1-217ENST00000521067 RPS2P15880 293 aaKnown RBP16.94■□□□□ 0.3
PABPC1-217ENST00000521067 RHCEP18577 417 aa16.94■□□□□ 0.3
PABPC1-217ENST00000521067 MAB21L1Q13394 359 aa16.94■□□□□ 0.3
PABPC1-217ENST00000521067 LYPD2Q6UXB3 125 aa16.94■□□□□ 0.3
PABPC1-217ENST00000521067 C9orf139Q6ZV77 190 aa16.94■□□□□ 0.3
PABPC1-217ENST00000521067 PARP8Q8N3A8 854 aa16.94■□□□□ 0.3
PABPC1-217ENST00000521067 RAB40AQ8WXH6 277 aa16.94■□□□□ 0.3
PABPC1-217ENST00000521067 UPRTQ96BW1 309 aa16.94■□□□□ 0.3
PABPC1-217ENST00000521067 DHRS1Q96LJ7 313 aa16.94■□□□□ 0.3
PABPC1-217ENST00000521067 KCTD14Q9BQ13 255 aaPredicted RBP16.94■□□□□ 0.3
PABPC1-217ENST00000521067 NDEL1Q9GZM8 345 aa16.94■□□□□ 0.3
PABPC1-217ENST00000521067 CCDC134Q9H6E4 229 aa16.94■□□□□ 0.3
PABPC1-217ENST00000521067 ABCD2Q9UBJ2 740 aa16.94■□□□□ 0.3
PABPC1-217ENST00000521067 POLR1DQ9Y2S0 133 aa16.94■□□□□ 0.3
PABPC1-217ENST00000521067 KIR2DS1A0A191URI9 304 aa16.93■□□□□ 0.3
PABPC1-217ENST00000521067 MDFIC2A0A1B0GVS7 189 aa16.93■□□□□ 0.3
PABPC1-217ENST00000521067 CLDN34H7C241 214 aa16.93■□□□□ 0.3
PABPC1-217ENST00000521067 PLATP00750 562 aa16.93■□□□□ 0.3
PABPC1-217ENST00000521067 PPIAL4GP0DN37 164 aa16.93■□□□□ 0.3
PABPC1-217ENST00000521067 SRP9P49458 86 aaKnown RBP16.93■□□□□ 0.3
PABPC1-217ENST00000521067 GNB2P62879 340 aa16.93■□□□□ 0.3
PABPC1-217ENST00000521067 COX10Q12887 443 aa16.93■□□□□ 0.3
PABPC1-217ENST00000521067 ZNF181Q2M3W8 571 aa16.93■□□□□ 0.3
PABPC1-217ENST00000521067 ZNF404Q494X3 552 aa16.93■□□□□ 0.3
PABPC1-217ENST00000521067 LEG1Q6P5S2 330 aa16.93■□□□□ 0.3
PABPC1-217ENST00000521067 SMARCD3Q6STE5 483 aa16.93■□□□□ 0.3
PABPC1-217ENST00000521067 LRRN1Q6UXK5 716 aa16.93■□□□□ 0.3
PABPC1-217ENST00000521067 HACD2Q6Y1H2 254 aa16.93■□□□□ 0.3
PABPC1-217ENST00000521067 CFAP77Q6ZQR2 320 aa16.93■□□□□ 0.3
PABPC1-217ENST00000521067 LINC00346Q8IVM7 164 aa16.93■□□□□ 0.3
PABPC1-217ENST00000521067 ERMAPQ96PL5 475 aaPredicted RBP16.93■□□□□ 0.3
PABPC1-217ENST00000521067 NMNAT3Q96T66 252 aa16.93■□□□□ 0.3
PABPC1-217ENST00000521067 HDHD2Q9H0R4 259 aa16.93■□□□□ 0.3
PABPC1-217ENST00000521067 ZMAT3Q9HA38 289 aaKnown RBP16.93■□□□□ 0.3
PABPC1-217ENST00000521067 DCAF13Q9NV06 445 aaKnown RBP16.93■□□□□ 0.3
PABPC1-217ENST00000521067 TMEM100Q9NV29 134 aa16.93■□□□□ 0.3
PABPC1-217ENST00000521067 ZNF446Q9NWS9 450 aa16.93■□□□□ 0.3
PABPC1-217ENST00000521067 MIOXQ9UGB7 285 aa16.93■□□□□ 0.3
PABPC1-217ENST00000521067 AURKCQ9UQB9 309 aa16.93■□□□□ 0.3
PABPC1-217ENST00000521067 FAM32AQ9Y421 112 aaKnown RBP16.93■□□□□ 0.3
PABPC1-217ENST00000521067 ACSM4P0C7M7 580 aa16.92■□□□□ 0.3
PABPC1-217ENST00000521067 CPT2P23786 658 aa16.92■□□□□ 0.3
PABPC1-217ENST00000521067 CRABP1P29762 137 aa16.92■□□□□ 0.3
PABPC1-217ENST00000521067 MDH1P40925 334 aaKnown RBP16.92■□□□□ 0.3
PABPC1-217ENST00000521067 NUDT2P50583 147 aa16.92■□□□□ 0.3
PABPC1-217ENST00000521067 RPS6KA3P51812 740 aa16.92■□□□□ 0.3
PABPC1-217ENST00000521067 PSME3P61289 254 aa16.92■□□□□ 0.3
PABPC1-217ENST00000521067 GK2Q14410 553 aaPredicted RBP16.92■□□□□ 0.3
PABPC1-217ENST00000521067 GLYATQ6IB77 296 aa16.92■□□□□ 0.3
PABPC1-217ENST00000521067 SLC18B1Q6NT16 456 aa16.92■□□□□ 0.3
PABPC1-217ENST00000521067 ZNF841Q6ZN19 808 aa16.92■□□□□ 0.3
PABPC1-217ENST00000521067 C19orf18Q8NEA5 215 aa16.92■□□□□ 0.3
PABPC1-217ENST00000521067 SLC26A10Q8NG04 563 aa16.92■□□□□ 0.3
PABPC1-217ENST00000521067 SLC25A28Q96A46 364 aa16.92■□□□□ 0.3
PABPC1-217ENST00000521067 NEIL1Q96FI4 390 aaPredicted RBP16.92■□□□□ 0.3
PABPC1-217ENST00000521067 F5H5K5 113 aa16.91■□□□□ 0.3
PABPC1-217ENST00000521067 FSTL3O95633 263 aa16.91■□□□□ 0.3
PABPC1-217ENST00000521067 HIST1H1CP16403 213 aaKnown RBP16.91■□□□□ 0.3
PABPC1-217ENST00000521067 ANOS1P23352 680 aa16.91■□□□□ 0.3
PABPC1-217ENST00000521067 FPR3P25089 353 aa16.91■□□□□ 0.3
PABPC1-217ENST00000521067 RFX4Q33E94 735 aa16.91■□□□□ 0.3
PABPC1-217ENST00000521067 BTNL3Q6UXE8 466 aa16.91■□□□□ 0.3
PABPC1-217ENST00000521067 FITM2Q8N6M3 262 aa16.91■□□□□ 0.3
PABPC1-217ENST00000521067 OR4K13Q8NH42 304 aa16.91■□□□□ 0.3
PABPC1-217ENST00000521067 CDADC1Q9BWV3 514 aa16.91■□□□□ 0.3
PABPC1-217ENST00000521067 PNRC2Q9NPJ4 139 aaKnown RBP16.91■□□□□ 0.3
PABPC1-217ENST00000521067 TGP01266 2768 aa16.91■□□□□ 0.3
PABPC1-217ENST00000521067 DOCK11Q5JSL3 2073 aa16.9■□□□□ 0.3
PABPC1-217ENST00000521067 TRAV40A0A0B4J280 105 aa16.9■□□□□ 0.3
PABPC1-217ENST00000521067 CCDC22O60826 627 aa16.9■□□□□ 0.3
PABPC1-217ENST00000521067 GGT2P36268 569 aa16.9■□□□□ 0.3
PABPC1-217ENST00000521067 GATA4P43694 442 aa16.9■□□□□ 0.3
PABPC1-217ENST00000521067 MTNR1AP48039 350 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms