RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 SLC1A2P43004 574 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 ALDH3B1P43353 468 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 EVX1P49640 407 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 ATP4BP51164 291 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 MMP15P51511 669 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 XKP51811 444 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 GBX2P52951 348 aaPredicted RBP3.1□□□□□ -1.91
VPS13B-208ENST00000521037 TAS2R39P59534 338 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 GPX6P59796 221 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 SELENOVP59797 346 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 RAB10P61026 200 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 ILF2Q12905 390 aaKnown RBP3.1□□□□□ -1.91
VPS13B-208ENST00000521037 FOXF1Q12946 379 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 PPP1R8Q12972 351 aaKnown RBP3.1□□□□□ -1.91
VPS13B-208ENST00000521037 PLA2G7Q13093 441 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 LCP2Q13094 533 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 CALCOCO2Q13137 446 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 STX5Q13190 355 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 TOMM34Q15785 309 aaPredicted RBP3.1□□□□□ -1.91
VPS13B-208ENST00000521037 TMEM35AQ53FP2 167 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 SYT14P1Q58G82 188 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 FBXO48Q5FWF7 155 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 TCHHL1Q5QJ38 904 aaPredicted RBP3.1□□□□□ -1.91
VPS13B-208ENST00000521037 TSPO2Q5TGU0 170 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 C9orf135Q5VTT2 229 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 KHDRBS2Q5VWX1 349 aaKnown RBP3.1□□□□□ -1.91
VPS13B-208ENST00000521037 TTC19Q6DKK2 380 aaPredicted RBP3.1□□□□□ -1.91
VPS13B-208ENST00000521037 ZNF774Q6NX45 483 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 LINC00523Q86TU6 105 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 ANKRD46Q86W74 232 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 C17orf78Q8N4C9 275 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 L3MBTL4Q8NA19 623 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 TMEM185AQ8NFB2 350 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 TTLQ8NG68 377 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 OR4C3Q8NH37 302 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 SLC26A7Q8TE54 656 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 DYDC1Q8WWB3 177 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 DYRK2Q92630 601 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 CPNE4Q96A23 557 aaPredicted RBP3.1□□□□□ -1.91
VPS13B-208ENST00000521037 ESAMQ96AP7 390 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 DNAJA3Q96EY1 480 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 LINGO1Q96FE5 620 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 PPP1R2P1Q96PQ5 205 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 SSX3Q99909 188 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 CCDC28BQ9BUN5 200 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 NOX3Q9HBY0 568 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 CENPMQ9NSP4 180 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 ZDHHC18Q9NUE0 388 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 LGALS13Q9UHV8 139 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 ABCG2Q9UNQ0 655 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 ARL2BPQ9Y2Y0 163 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 ANGPTL3Q9Y5C1 460 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 A0A087X0K7 114 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 ERI2A8K979 691 aaKnown RBP3.09□□□□□ -1.91
VPS13B-208ENST00000521037 PRR32B1ATL7 298 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 AP3B1O00203 1094 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 TNFRSF13BO14836 293 aaPredicted RBP3.09□□□□□ -1.91
VPS13B-208ENST00000521037 SYNGR3O43761 229 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 XPNPEP2O43895 674 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 GMFGO60234 142 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 DCTN3O75935 186 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 ANP32DO95626 131 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 ANGPTL1O95841 491 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 GAS8O95995 478 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 IGHMP01871 453 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 GSTA2P09210 222 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 ZSCAN5DPP0CG00 497 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 NEFHP12036 1026 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 ZNF35P13682 527 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 PRG2P13727 222 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 ANPEPP15144 967 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 NQO1P15559 274 aaKnown RBP3.09□□□□□ -1.91
VPS13B-208ENST00000521037 ZNF10P21506 573 aaPredicted RBP3.09□□□□□ -1.91
VPS13B-208ENST00000521037 SFTPDP35247 375 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 SOX6P35712 828 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 FEN1P39748 380 aaKnown RBP3.09□□□□□ -1.91
VPS13B-208ENST00000521037 SLC1A1P43005 524 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 CRYBB2P43320 205 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 OR3A1P47881 315 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 FOXA1P55317 472 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 P2RX3P56373 397 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 ZP1P60852 638 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 TUBA1BP68363 451 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 H3F3AP84243 136 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 CDKL1Q00532 357 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 GALK2Q01415 458 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 SLC34A1Q06495 639 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 BNIP1Q12981 228 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 PDZK1IP1Q13113 114 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 PDK3Q15120 406 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 TRIP13Q15645 432 aaPredicted RBP3.09□□□□□ -1.91
VPS13B-208ENST00000521037 CD226Q15762 336 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 TTLL9Q3SXZ7 439 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 ARMCX4Q5H9R4 360 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 SEL1L2Q5TEA6 688 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 SLC35E4Q6ICL7 350 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 OR7E24Q6IFN5 339 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 WDR88Q6ZMY6 472 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 TUBA1AQ71U36 451 aa3.09□□□□□ -1.91
VPS13B-208ENST00000521037 SLC16A9Q7RTY1 509 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms