RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 PPIAL4EA0A075B759 164 aa13.33□□□□□ -0.28
CLN8-205ENST00000520991 PPIAL4CA0A0B4J2A2 164 aa13.33□□□□□ -0.28
CLN8-205ENST00000520991 PPIAL4DF5H284 164 aa13.33□□□□□ -0.28
CLN8-205ENST00000520991 F5H5K5 113 aa13.33□□□□□ -0.28
CLN8-205ENST00000520991 TRIM77I1YAP6 450 aa13.33□□□□□ -0.28
CLN8-205ENST00000520991 IFNL4K9M1U5 179 aa13.33□□□□□ -0.28
CLN8-205ENST00000520991 PPIAL4FP0DN26 164 aa13.33□□□□□ -0.28
CLN8-205ENST00000520991 ZFP36P26651 326 aaKnown RBP13.33□□□□□ -0.28
CLN8-205ENST00000520991 MDH2P40926 338 aaKnown RBP13.33□□□□□ -0.28
CLN8-205ENST00000520991 SRP9P49458 86 aaKnown RBP13.33□□□□□ -0.28
CLN8-205ENST00000520991 MMP16P51512 607 aa13.33□□□□□ -0.28
CLN8-205ENST00000520991 DBPQ10586 325 aaPredicted RBP13.33□□□□□ -0.28
CLN8-205ENST00000520991 ECH1Q13011 328 aa13.33□□□□□ -0.28
CLN8-205ENST00000520991 SPATS1Q496A3 300 aa13.33□□□□□ -0.28
CLN8-205ENST00000520991 CLEC12AQ5QGZ9 265 aa13.33□□□□□ -0.28
CLN8-205ENST00000520991 SLC35F1Q5T1Q4 408 aa13.33□□□□□ -0.28
CLN8-205ENST00000520991 SLC18B1Q6NT16 456 aa13.33□□□□□ -0.28
CLN8-205ENST00000520991 PGBD2Q6P3X8 592 aa13.33□□□□□ -0.28
CLN8-205ENST00000520991 ZBTB46Q86UZ6 589 aa13.33□□□□□ -0.28
CLN8-205ENST00000520991 LRRC28Q86X40 367 aaPredicted RBP13.33□□□□□ -0.28
CLN8-205ENST00000520991 MUC20Q8N307 709 aaPredicted RBP13.33□□□□□ -0.28
CLN8-205ENST00000520991 OR52E2Q8NGJ4 325 aa13.33□□□□□ -0.28
CLN8-205ENST00000520991 MEGF10Q96KG7 1140 aa13.33□□□□□ -0.28
CLN8-205ENST00000520991 SIGLEC11Q96RL6 698 aa13.33□□□□□ -0.28
CLN8-205ENST00000520991 SLC6A7Q99884 636 aa13.33□□□□□ -0.28
CLN8-205ENST00000520991 ATF6BQ99941 703 aa13.33□□□□□ -0.28
CLN8-205ENST00000520991 WDR76Q9H967 626 aa13.33□□□□□ -0.28
CLN8-205ENST00000520991 OPN4Q9UHM6 478 aa13.33□□□□□ -0.28
CLN8-205ENST00000520991 OR6C68A6NDL8 312 aa13.32□□□□□ -0.28
CLN8-205ENST00000520991 TMEM178BH3BS89 294 aa13.32□□□□□ -0.28
CLN8-205ENST00000520991 KRT36O76013 467 aa13.32□□□□□ -0.28
CLN8-205ENST00000520991 ZNF823P16415 610 aa13.32□□□□□ -0.28
CLN8-205ENST00000520991 SELEP16581 610 aa13.32□□□□□ -0.28
CLN8-205ENST00000520991 GYS2P54840 703 aa13.32□□□□□ -0.28
CLN8-205ENST00000520991 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.32□□□□□ -0.28
CLN8-205ENST00000520991 MALLQ13021 153 aa13.32□□□□□ -0.28
CLN8-205ENST00000520991 ESCO2Q56NI9 601 aa13.32□□□□□ -0.28
CLN8-205ENST00000520991 SLC30A2Q9BRI3 323 aa13.32□□□□□ -0.28
CLN8-205ENST00000520991 C1QTNF5Q9BXJ0 243 aa13.32□□□□□ -0.28
CLN8-205ENST00000520991 EGLN3Q9H6Z9 239 aa13.32□□□□□ -0.28
CLN8-205ENST00000520991 WNK2Q9Y3S1 2297 aa13.32□□□□□ -0.28
CLN8-205ENST00000520991 IGHV3-64DA0A0J9YX35 117 aa13.31□□□□□ -0.28
CLN8-205ENST00000520991 IQCF6A8MYZ5 107 aa13.31□□□□□ -0.28
CLN8-205ENST00000520991 H0YL77 283 aa13.31□□□□□ -0.28
CLN8-205ENST00000520991 TNFRSF11BO00300 401 aa13.31□□□□□ -0.28
CLN8-205ENST00000520991 LCATP04180 440 aa13.31□□□□□ -0.28
CLN8-205ENST00000520991 ACSM4P0C7M7 580 aa13.31□□□□□ -0.28
CLN8-205ENST00000520991 FPR2P25090 351 aa13.31□□□□□ -0.28
CLN8-205ENST00000520991 SLC6A9P48067 706 aa13.31□□□□□ -0.28
CLN8-205ENST00000520991 MNAT1P51948 309 aa13.31□□□□□ -0.28
CLN8-205ENST00000520991 SEC61A1P61619 476 aaKnown RBP13.31□□□□□ -0.28
CLN8-205ENST00000520991 TRAP1Q12931 704 aaKnown RBP13.31□□□□□ -0.28
CLN8-205ENST00000520991 ARMCX4Q5H9R4 360 aa13.31□□□□□ -0.28
CLN8-205ENST00000520991 RPL13AP3Q6NVV1 102 aa13.31□□□□□ -0.28
CLN8-205ENST00000520991 CYP2R1Q6VVX0 501 aa13.31□□□□□ -0.28
CLN8-205ENST00000520991 COLCA1Q6ZS62 124 aa13.31□□□□□ -0.28
CLN8-205ENST00000520991 PROKR2Q8NFJ6 384 aa13.31□□□□□ -0.28
CLN8-205ENST00000520991 OR9Q2Q8NGE9 314 aa13.31□□□□□ -0.28
CLN8-205ENST00000520991 ZNF420Q8TAQ5 688 aaPredicted RBP13.31□□□□□ -0.28
CLN8-205ENST00000520991 FAM216AQ8WUB2 273 aa13.31□□□□□ -0.28
CLN8-205ENST00000520991 C22orf15Q8WYQ4 148 aa13.31□□□□□ -0.28
CLN8-205ENST00000520991 RBM4Q9BWF3 364 aaKnown RBP13.31□□□□□ -0.28
CLN8-205ENST00000520991 MMP26Q9NRE1 261 aa13.31□□□□□ -0.28
CLN8-205ENST00000520991 TMEM100Q9NV29 134 aa13.31□□□□□ -0.28
CLN8-205ENST00000520991 OR5V1Q9UGF6 321 aa13.31□□□□□ -0.28
CLN8-205ENST00000520991 CYB5R1Q9UHQ9 305 aa13.31□□□□□ -0.28
CLN8-205ENST00000520991 KCNG2Q9UJ96 466 aa13.31□□□□□ -0.28
CLN8-205ENST00000520991 LYVE1Q9Y5Y7 322 aa13.31□□□□□ -0.28
CLN8-205ENST00000520991 CDH10Q9Y6N8 788 aa13.31□□□□□ -0.28
CLN8-205ENST00000520991 LRRC30A6NM36 301 aa13.3□□□□□ -0.28
CLN8-205ENST00000520991 CEACAM18A8MTB9 384 aa13.3□□□□□ -0.28
CLN8-205ENST00000520991 F5H0A9 414 aaPredicted RBP13.3□□□□□ -0.28
CLN8-205ENST00000520991 F5H5P2 479 aa13.3□□□□□ -0.28
CLN8-205ENST00000520991 MLNRO43193 412 aa13.3□□□□□ -0.28
CLN8-205ENST00000520991 CYB5R3P00387 301 aaPredicted RBP13.3□□□□□ -0.28
CLN8-205ENST00000520991 GGT2P36268 569 aa13.3□□□□□ -0.28
CLN8-205ENST00000520991 ZNF154Q13106 437 aa13.3□□□□□ -0.28
CLN8-205ENST00000520991 RSPO1Q2MKA7 263 aaPredicted RBP13.3□□□□□ -0.28
CLN8-205ENST00000520991 KRTAP27-1Q3LI81 207 aa13.3□□□□□ -0.28
CLN8-205ENST00000520991 PIGWQ7Z7B1 504 aa13.3□□□□□ -0.28
CLN8-205ENST00000520991 MOGAT3Q86VF5 341 aa13.3□□□□□ -0.28
CLN8-205ENST00000520991 LINC00471Q8N535 108 aa13.3□□□□□ -0.28
CLN8-205ENST00000520991 CYB561A3Q8NBI2 242 aa13.3□□□□□ -0.28
CLN8-205ENST00000520991 DEFB108BQ8NET1 73 aa13.3□□□□□ -0.28
CLN8-205ENST00000520991 GCDHQ92947 438 aaPredicted RBP13.3□□□□□ -0.28
CLN8-205ENST00000520991 POP5Q969H6 163 aaKnown RBP13.3□□□□□ -0.28
CLN8-205ENST00000520991 SPTSSAQ969W0 71 aa13.3□□□□□ -0.28
CLN8-205ENST00000520991 MRI1Q9BV20 369 aa13.3□□□□□ -0.28
CLN8-205ENST00000520991 ACTR3BQ9P1U1 418 aa13.3□□□□□ -0.28
CLN8-205ENST00000520991 POLR3KQ9Y2Y1 108 aaPredicted RBP13.3□□□□□ -0.28
CLN8-205ENST00000520991 AUP1Q9Y679 476 aa13.3□□□□□ -0.28
CLN8-205ENST00000520991 ARHGAP32A7KAX9 2087 aa13.3□□□□□ -0.28
CLN8-205ENST00000520991 A8MXK9 166 aa13.29□□□□□ -0.28
CLN8-205ENST00000520991 TRAPPC2LH3BP13 241 aa13.29□□□□□ -0.28
CLN8-205ENST00000520991 ZNF205O95201 554 aa13.29□□□□□ -0.28
CLN8-205ENST00000520991 FSHBP01225 129 aa13.29□□□□□ -0.28
CLN8-205ENST00000520991 RPS2P15880 293 aaKnown RBP13.29□□□□□ -0.28
CLN8-205ENST00000520991 ATP6V1B2P21281 511 aa13.29□□□□□ -0.28
CLN8-205ENST00000520991 PYCR1P32322 319 aa13.29□□□□□ -0.28
CLN8-205ENST00000520991 TPTEP56180 551 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms