RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 OR6V1Q8N148 313 aa16.48■□□□□ 0.23
PABPC1-215ENST00000520804 FANK1Q8TC84 345 aa16.48■□□□□ 0.23
PABPC1-215ENST00000520804 SLC30A2Q9BRI3 323 aa16.48■□□□□ 0.23
PABPC1-215ENST00000520804 GORASP2Q9H8Y8 452 aa16.48■□□□□ 0.23
PABPC1-215ENST00000520804 TMEM165Q9HC07 324 aa16.48■□□□□ 0.23
PABPC1-215ENST00000520804 SRA1Q9HD15 236 aaKnown RBP16.48■□□□□ 0.23
PABPC1-215ENST00000520804 ADA2Q9NZK5 511 aa16.48■□□□□ 0.23
PABPC1-215ENST00000520804 LRCH1Q9Y2L9 728 aa16.48■□□□□ 0.23
PABPC1-215ENST00000520804 ARPC3O15145 178 aa16.47■□□□□ 0.23
PABPC1-215ENST00000520804 CYB5R3P00387 301 aaPredicted RBP16.47■□□□□ 0.23
PABPC1-215ENST00000520804 SEMG1P04279 462 aa16.47■□□□□ 0.23
PABPC1-215ENST00000520804 PRDX6P30041 224 aa16.47■□□□□ 0.23
PABPC1-215ENST00000520804 SLC6A6P31641 620 aa16.47■□□□□ 0.23
PABPC1-215ENST00000520804 SMIM11AP58511 58 aa16.47■□□□□ 0.23
PABPC1-215ENST00000520804 PAX8Q06710 450 aa16.47■□□□□ 0.23
PABPC1-215ENST00000520804 ZNF181Q2M3W8 571 aa16.47■□□□□ 0.23
PABPC1-215ENST00000520804 KRTAP27-1Q3LI81 207 aa16.47■□□□□ 0.23
PABPC1-215ENST00000520804 LEG1Q6P5S2 330 aa16.47■□□□□ 0.23
PABPC1-215ENST00000520804 COLCA1Q6ZS62 124 aa16.47■□□□□ 0.23
PABPC1-215ENST00000520804 JAZF1Q86VZ6 243 aa16.47■□□□□ 0.23
PABPC1-215ENST00000520804 BCL6BQ8N143 479 aaPredicted RBP16.47■□□□□ 0.23
PABPC1-215ENST00000520804 RNF148Q8N7C7 305 aa16.47■□□□□ 0.23
PABPC1-215ENST00000520804 SLC26A10Q8NG04 563 aa16.47■□□□□ 0.23
PABPC1-215ENST00000520804 NMNAT3Q96T66 252 aa16.47■□□□□ 0.23
PABPC1-215ENST00000520804 OR52D1Q9H346 318 aa16.47■□□□□ 0.23
PABPC1-215ENST00000520804 WDR76Q9H967 626 aa16.47■□□□□ 0.23
PABPC1-215ENST00000520804 MED4Q9NPJ6 270 aa16.47■□□□□ 0.23
PABPC1-215ENST00000520804 A0A1B0GWJ7 208 aa16.46■□□□□ 0.23
PABPC1-215ENST00000520804 ZNF205O95201 554 aa16.46■□□□□ 0.23
PABPC1-215ENST00000520804 GADD45GO95257 159 aa16.46■□□□□ 0.23
PABPC1-215ENST00000520804 RENP00797 406 aa16.46■□□□□ 0.23
PABPC1-215ENST00000520804 HKR1P10072 659 aa16.46■□□□□ 0.23
PABPC1-215ENST00000520804 RPS2P15880 293 aaKnown RBP16.46■□□□□ 0.23
PABPC1-215ENST00000520804 HIST1H1CP16403 213 aaKnown RBP16.46■□□□□ 0.23
PABPC1-215ENST00000520804 PRTN3P24158 256 aa16.46■□□□□ 0.23
PABPC1-215ENST00000520804 CD80P33681 288 aa16.46■□□□□ 0.23
PABPC1-215ENST00000520804 PAX2Q02962 417 aa16.46■□□□□ 0.23
PABPC1-215ENST00000520804 SLC18B1Q6NT16 456 aa16.46■□□□□ 0.23
PABPC1-215ENST00000520804 CFAP77Q6ZQR2 320 aa16.46■□□□□ 0.23
PABPC1-215ENST00000520804 MOGAT3Q86VF5 341 aa16.46■□□□□ 0.23
PABPC1-215ENST00000520804 BHLHE23Q8NDY6 225 aa16.46■□□□□ 0.23
PABPC1-215ENST00000520804 OR4K13Q8NH42 304 aa16.46■□□□□ 0.23
PABPC1-215ENST00000520804 PYURFQ96I23 114 aa16.46■□□□□ 0.23
PABPC1-215ENST00000520804 ELAC2Q9BQ52 826 aaKnown RBP16.46■□□□□ 0.23
PABPC1-215ENST00000520804 SSBP3Q9BWW4 388 aaPredicted RBP16.46■□□□□ 0.23
PABPC1-215ENST00000520804 HCAR1Q9BXC0 346 aa16.46■□□□□ 0.23
PABPC1-215ENST00000520804 C1QTNF5Q9BXJ0 243 aa16.46■□□□□ 0.23
PABPC1-215ENST00000520804 TMEM100Q9NV29 134 aa16.46■□□□□ 0.23
PABPC1-215ENST00000520804 V9GYQ6 96 aa16.46■□□□□ 0.23
PABPC1-215ENST00000520804 DNAJC9-AS1A6NH13 148 aa16.45■□□□□ 0.22
PABPC1-215ENST00000520804 F5H5P2 479 aa16.45■□□□□ 0.22
PABPC1-215ENST00000520804 FSTL3O95633 263 aa16.45■□□□□ 0.22
PABPC1-215ENST00000520804 ACSM4P0C7M7 580 aa16.45■□□□□ 0.22
PABPC1-215ENST00000520804 SELEP16581 610 aa16.45■□□□□ 0.22
PABPC1-215ENST00000520804 FPR3P25089 353 aa16.45■□□□□ 0.22
PABPC1-215ENST00000520804 SPIBQ01892 262 aa16.45■□□□□ 0.22
PABPC1-215ENST00000520804 DBPQ10586 325 aaPredicted RBP16.45■□□□□ 0.22
PABPC1-215ENST00000520804 FOXL1Q12952 345 aa16.45■□□□□ 0.22
PABPC1-215ENST00000520804 SLC36A3Q495N2 470 aa16.45■□□□□ 0.22
PABPC1-215ENST00000520804 ZBTB46Q86UZ6 589 aa16.45■□□□□ 0.22
PABPC1-215ENST00000520804 KLBQ86Z14 1044 aa16.45■□□□□ 0.22
PABPC1-215ENST00000520804 LINC00346Q8IVM7 164 aa16.45■□□□□ 0.22
PABPC1-215ENST00000520804 C1orf147Q96MC9 270 aaPredicted RBP16.45■□□□□ 0.22
PABPC1-215ENST00000520804 ZNF48Q96MX3 618 aaPredicted RBP16.45■□□□□ 0.22
PABPC1-215ENST00000520804 ZMAT3Q9HA38 289 aaKnown RBP16.45■□□□□ 0.22
PABPC1-215ENST00000520804 RPRD1BQ9NQG5 326 aaKnown RBP16.45■□□□□ 0.22
PABPC1-215ENST00000520804 MIOXQ9UGB7 285 aa16.45■□□□□ 0.22
PABPC1-215ENST00000520804 IGHV3-64DA0A0J9YX35 117 aa16.44■□□□□ 0.22
PABPC1-215ENST00000520804 LRRC30A6NM36 301 aa16.44■□□□□ 0.22
PABPC1-215ENST00000520804 HLA-DPB1P04440 258 aa16.44■□□□□ 0.22
PABPC1-215ENST00000520804 PPIAL4GP0DN37 164 aa16.44■□□□□ 0.22
PABPC1-215ENST00000520804 PMELP40967 661 aa16.44■□□□□ 0.22
PABPC1-215ENST00000520804 GNB2P62879 340 aa16.44■□□□□ 0.22
PABPC1-215ENST00000520804 ECH1Q13011 328 aa16.44■□□□□ 0.22
PABPC1-215ENST00000520804 GK2Q14410 553 aaPredicted RBP16.44■□□□□ 0.22
PABPC1-215ENST00000520804 ZNF404Q494X3 552 aa16.44■□□□□ 0.22
PABPC1-215ENST00000520804 BTNL3Q6UXE8 466 aa16.44■□□□□ 0.22
PABPC1-215ENST00000520804 LRRN1Q6UXK5 716 aa16.44■□□□□ 0.22
PABPC1-215ENST00000520804 C1orf87Q8N0U7 546 aa16.44■□□□□ 0.22
PABPC1-215ENST00000520804 NEIL1Q96FI4 390 aaPredicted RBP16.44■□□□□ 0.22
PABPC1-215ENST00000520804 DUX5Q96PT3 197 aa16.44■□□□□ 0.22
PABPC1-215ENST00000520804 PITX2Q99697 317 aa16.44■□□□□ 0.22
PABPC1-215ENST00000520804 ATF6BQ99941 703 aa16.44■□□□□ 0.22
PABPC1-215ENST00000520804 TMEM246Q9BRR3 403 aa16.44■□□□□ 0.22
PABPC1-215ENST00000520804 IFT27Q9BW83 186 aa16.44■□□□□ 0.22
PABPC1-215ENST00000520804 CDADC1Q9BWV3 514 aa16.44■□□□□ 0.22
PABPC1-215ENST00000520804 CYB5R1Q9UHQ9 305 aa16.44■□□□□ 0.22
PABPC1-215ENST00000520804 MAGEL2Q9UJ55 1249 aa16.44■□□□□ 0.22
PABPC1-215ENST00000520804 OR6C68A6NDL8 312 aa16.43■□□□□ 0.22
PABPC1-215ENST00000520804 F5H5K5 113 aa16.43■□□□□ 0.22
PABPC1-215ENST00000520804 OR10H3O60404 316 aa16.43■□□□□ 0.22
PABPC1-215ENST00000520804 NOS3P29474 1203 aa16.43■□□□□ 0.22
PABPC1-215ENST00000520804 GGT2P36268 569 aa16.43■□□□□ 0.22
PABPC1-215ENST00000520804 GATA4P43694 442 aa16.43■□□□□ 0.22
PABPC1-215ENST00000520804 GSSP48637 474 aa16.43■□□□□ 0.22
PABPC1-215ENST00000520804 PRSS12P56730 875 aa16.43■□□□□ 0.22
PABPC1-215ENST00000520804 BAMBIQ13145 260 aa16.43■□□□□ 0.22
PABPC1-215ENST00000520804 NAA40Q86UY6 237 aa16.43■□□□□ 0.22
PABPC1-215ENST00000520804 OR52E2Q8NGJ4 325 aa16.43■□□□□ 0.22
PABPC1-215ENST00000520804 OR2AJ1Q8NGZ0 328 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms