RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 MCHR2Q969V1 340 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 OR51B6Q9H340 312 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 A0A0G2JK05 382 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 HSPB2A8KAH6 182 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 CTAG2O75638 210 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 HLA-AP01891 365 aaKnown RBP9.07□□□□□ -0.96
MCF2-209ENST00000520602 CXCL3P19876 107 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 RPS11P62280 158 aaKnown RBP eCLIP9.07□□□□□ -0.96
MCF2-209ENST00000520602 HSPB2Q16082 182 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 EXOSC6Q5RKV6 272 aaKnown RBP9.07□□□□□ -0.96
MCF2-209ENST00000520602 SLC16A14Q7RTX9 510 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 MAML2Q8IZL2 1156 aaPredicted RBP9.07□□□□□ -0.96
MCF2-209ENST00000520602 C12orf45Q8N5I9 185 aaPredicted RBP9.07□□□□□ -0.96
MCF2-209ENST00000520602 INO80EQ8NBZ0 244 aaPredicted RBP9.07□□□□□ -0.96
MCF2-209ENST00000520602 SLC26A10Q8NG04 563 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 OR4S1Q8NGB4 309 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 CLDN23Q96B33 292 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 RAB3CQ96E17 227 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 OR10A2Q9H208 303 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 UBQLN2Q9UHD9 624 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 RAB22AQ9UL26 194 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 PYCARD-AS1I3L0S3 204 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 KNG1P01042 644 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 CLPSP04118 112 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 HRGP04196 525 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 ADRA2CP18825 462 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 AGFG1P52594 562 aaKnown RBP9.06□□□□□ -0.96
MCF2-209ENST00000520602 IL13RA1P78552 427 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 WIPI1Q5MNZ9 446 aaPredicted RBP9.06□□□□□ -0.96
MCF2-209ENST00000520602 FNDC7Q5VTL7 733 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 P4HA3Q7Z4N8 544 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 GABRG1Q8N1C3 465 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 FAM181AQ8N9Y4 354 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 OR5H2Q8NGV7 314 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 ASB5Q8WWX0 329 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 RGP1Q92546 391 aaPredicted RBP9.06□□□□□ -0.96
MCF2-209ENST00000520602 PTDSS2Q9BVG9 487 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 LRFN1Q9P244 771 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 RBM7Q9Y580 266 aaKnown RBP9.06□□□□□ -0.96
MCF2-209ENST00000520602 TMEM272A0A1B0GTI8 110 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 OR2M5A3KFT3 312 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 MS4A18H0YCH9 400 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 MRPL33O75394 65 aaKnown RBP9.06□□□□□ -0.96
MCF2-209ENST00000520602 SERPINA5P05154 406 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 CD79AP11912 226 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 ZNF35P13682 527 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 PRSS12P56730 875 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 MS4A18Q3C1V0 323 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 PLA1AQ53H76 456 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 FAM198BQ6UWH4 519 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 TCTE3Q8IZS6 198 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 OR2Y1Q8NGV0 311 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 ALKBH3Q96Q83 286 aaPredicted RBP9.06□□□□□ -0.96
MCF2-209ENST00000520602 TGIF2Q9GZN2 237 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 CALHM2Q9HA72 323 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 PLEKHJ1Q9NW61 149 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 GLTPQ9NZD2 209 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 PFDN2Q9UHV9 154 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 SLC7A11Q9UPY5 501 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 KANTRA0A1W2PQU2 76 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 RP2O75695 350 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 CBR3O75828 277 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 PMP2P02689 132 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 HPXP02790 462 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 LPLP06858 475 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 ACSM4P0C7M7 580 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 GNB3P16520 340 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 DLSTP36957 453 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 MTCP1P56278 107 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 SORDQ00796 357 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 PLPPR5Q32ZL2 321 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 BATF2Q8N1L9 274 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 LRRC75AQ8NAA5 344 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 CLEC1AQ8NC01 280 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 OR2M3Q8NG83 312 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 OR52N4Q8NGI2 321 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 ZBTB8AQ96BR9 441 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 BORCS8Q96FH0 119 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 ZC3HAV1LQ96H79 300 aaKnown RBP9.06□□□□□ -0.96
MCF2-209ENST00000520602 UCN2Q96RP3 112 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 UTP23Q9BRU9 249 aaKnown RBP9.06□□□□□ -0.96
MCF2-209ENST00000520602 ZNF471Q9BX82 626 aaPredicted RBP9.06□□□□□ -0.96
MCF2-209ENST00000520602 P4HTMQ9NXG6 502 aa9.06□□□□□ -0.96
MCF2-209ENST00000520602 BOKQ9UMX3 212 aaPredicted RBP9.06□□□□□ -0.96
MCF2-209ENST00000520602 IGLV1-36A0A0B4J1U3 117 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 OR2AT4A6NND4 320 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 STMND1H3BQB6 276 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 DHHO43323 396 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 IGHEP01854 428 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 HLA-DQB1P01920 261 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 CD63P08962 238 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 BLVRBP30043 206 aaPredicted RBP9.05□□□□□ -0.96
MCF2-209ENST00000520602 S100A10P60903 97 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 GSG1Q2KHT4 349 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 BEX5Q5H9J7 111 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 TIGD3Q6B0B8 471 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 THOC7Q6I9Y2 204 aaKnown RBP9.05□□□□□ -0.96
MCF2-209ENST00000520602 ANKRD16Q6P6B7 361 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 ARHGEF39Q8N4T4 335 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 RNASE11Q8TAA1 199 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms