RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 PPOXP50336 477 aa10.16□□□□□ -0.78
HPS4-218ENST00000519774 NUDT6P53370 316 aa10.16□□□□□ -0.78
HPS4-218ENST00000519774 HCCSP53701 268 aa10.16□□□□□ -0.78
HPS4-218ENST00000519774 TPTEP56180 551 aa10.16□□□□□ -0.78
HPS4-218ENST00000519774 RSPO1Q2MKA7 263 aaPredicted RBP10.16□□□□□ -0.78
HPS4-218ENST00000519774 ZNF283Q8N7M2 679 aa10.16□□□□□ -0.78
HPS4-218ENST00000519774 ZNF555Q8NEP9 628 aa10.16□□□□□ -0.78
HPS4-218ENST00000519774 OTOSQ8NHW6 89 aa10.16□□□□□ -0.78
HPS4-218ENST00000519774 KLF14Q8TD94 323 aaPredicted RBP10.16□□□□□ -0.78
HPS4-218ENST00000519774 UBE2FQ969M7 185 aa10.16□□□□□ -0.78
HPS4-218ENST00000519774 APOBEC3DQ96AK3 386 aaPredicted RBP10.16□□□□□ -0.78
HPS4-218ENST00000519774 ZNF799Q96GE5 643 aa10.16□□□□□ -0.78
HPS4-218ENST00000519774 MARS2Q96GW9 593 aaKnown RBP10.16□□□□□ -0.78
HPS4-218ENST00000519774 ZNF582Q96NG8 517 aaPredicted RBP10.16□□□□□ -0.78
HPS4-218ENST00000519774 SORCS2Q96PQ0 1159 aa10.16□□□□□ -0.78
HPS4-218ENST00000519774 DOK1Q99704 481 aa10.16□□□□□ -0.78
HPS4-218ENST00000519774 TPK1Q9H3S4 243 aa10.16□□□□□ -0.78
HPS4-218ENST00000519774 DDX28Q9NUL7 540 aaKnown RBP10.16□□□□□ -0.78
HPS4-218ENST00000519774 TBCCD1Q9NVR7 557 aa10.16□□□□□ -0.78
HPS4-218ENST00000519774 FAM118AQ9NWS6 357 aa10.16□□□□□ -0.78
HPS4-218ENST00000519774 TAAR3PQ9P1P4 343 aa10.16□□□□□ -0.78
HPS4-218ENST00000519774 LAMP5Q9UJQ1 280 aa10.16□□□□□ -0.78
HPS4-218ENST00000519774 KLHDC2Q9Y2U9 406 aa10.16□□□□□ -0.78
HPS4-218ENST00000519774 CSMD1Q96PZ7 3565 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 IGLV3-9A0A075B6K5 115 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 LOC100130705A0A1B0GUX0 176 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 CASQ2O14958 399 aaPredicted RBP10.15□□□□□ -0.78
HPS4-218ENST00000519774 SSX4O60224 188 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 LY6HO94772 140 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 APOL3O95236 402 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 H2BFMP0C1H6 154 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 SLC2A1P11166 492 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 SLC15A1P46059 708 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 EVX1P49640 407 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 GRB2P62993 217 aaKnown RBP10.15□□□□□ -0.78
HPS4-218ENST00000519774 SLC34A1Q06495 639 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 TESK1Q15569 626 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 KRTAP27-1Q3LI81 207 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 OGFRL1Q5TC84 451 aaPredicted RBP10.15□□□□□ -0.78
HPS4-218ENST00000519774 LRRN1Q6UXK5 716 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 NAA40Q86UY6 237 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 KRTAP1-3Q8IUG1 177 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 SLC35F2Q8IXU6 374 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 C1orf174Q8IYL3 243 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 ZCCHC24Q8N2G6 241 aaKnown RBP10.15□□□□□ -0.78
HPS4-218ENST00000519774 PACRGLQ8N7B6 248 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 WFDC11Q8NEX6 87 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 OR51G2Q8NGK0 314 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 OR5L1Q8NGL2 311 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 SNX33Q8WV41 574 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 RNF133Q8WVZ7 376 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 CYGBQ8WWM9 190 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 COG8Q96MW5 612 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 RDH12Q96NR8 316 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 KCNJ15Q99712 375 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 YIPF3Q9GZM5 350 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 RNPEPL1Q9HAU8 725 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 BARX1Q9HBU1 254 aaPredicted RBP10.15□□□□□ -0.78
HPS4-218ENST00000519774 C8orf4Q9NR00 106 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 AASSQ9UDR5 926 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 WARS2Q9UGM6 360 aaKnown RBP10.15□□□□□ -0.78
HPS4-218ENST00000519774 FBXO9Q9UK97 447 aaPredicted RBP10.15□□□□□ -0.78
HPS4-218ENST00000519774 N6AMT1Q9Y5N5 214 aa10.15□□□□□ -0.78
HPS4-218ENST00000519774 E9PQ18 207 aa10.14□□□□□ -0.79
HPS4-218ENST00000519774 H3BSA7 217 aa10.14□□□□□ -0.79
HPS4-218ENST00000519774 J3QW42 95 aa10.14□□□□□ -0.79
HPS4-218ENST00000519774 DLGAP1O14490 977 aa10.14□□□□□ -0.79
HPS4-218ENST00000519774 TIMM8AO60220 97 aaPredicted RBP10.14□□□□□ -0.79
HPS4-218ENST00000519774 ENTPD6O75354 484 aa10.14□□□□□ -0.79
HPS4-218ENST00000519774 ERCC1P07992 297 aaPredicted RBP10.14□□□□□ -0.79
HPS4-218ENST00000519774 NAT2P11245 290 aa10.14□□□□□ -0.79
HPS4-218ENST00000519774 HTR1FP30939 366 aa10.14□□□□□ -0.79
HPS4-218ENST00000519774 OTX1P32242 354 aaPredicted RBP10.14□□□□□ -0.79
HPS4-218ENST00000519774 CX3CR1P49238 355 aa10.14□□□□□ -0.79
HPS4-218ENST00000519774 SNRPGP62308 76 aaKnown RBP10.14□□□□□ -0.79
HPS4-218ENST00000519774 GGTLC2Q14390 218 aa10.14□□□□□ -0.79
HPS4-218ENST00000519774 HLXQ14774 488 aaPredicted RBP10.14□□□□□ -0.79
HPS4-218ENST00000519774 TMEM255AQ5JRV8 349 aa10.14□□□□□ -0.79
HPS4-218ENST00000519774 SHEQ5VZ18 495 aa10.14□□□□□ -0.79
HPS4-218ENST00000519774 MBNL2Q5VZF2 373 aaKnown RBP10.14□□□□□ -0.79
HPS4-218ENST00000519774 BRICD5Q6PL45 260 aa10.14□□□□□ -0.79
HPS4-218ENST00000519774 KRT77Q7Z794 578 aa10.14□□□□□ -0.79
HPS4-218ENST00000519774 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.14□□□□□ -0.79
HPS4-218ENST00000519774 ENTHD1Q8IYW4 607 aa10.14□□□□□ -0.79
HPS4-218ENST00000519774 TRUB1Q8WWH5 349 aaKnown RBP10.14□□□□□ -0.79
HPS4-218ENST00000519774 GTF3AQ92664 365 aaKnown RBP10.14□□□□□ -0.79
HPS4-218ENST00000519774 RFKQ969G6 155 aa10.14□□□□□ -0.79
HPS4-218ENST00000519774 Q96MF0 132 aa10.14□□□□□ -0.79
HPS4-218ENST00000519774 TBX5Q99593 518 aa10.14□□□□□ -0.79
HPS4-218ENST00000519774 C1QTNF5Q9BXJ0 243 aa10.14□□□□□ -0.79
HPS4-218ENST00000519774 RAB1BQ9H0U4 201 aa10.14□□□□□ -0.79
HPS4-218ENST00000519774 VCXQ9H320 206 aa10.14□□□□□ -0.79
HPS4-218ENST00000519774 ADGRL4Q9HBW9 690 aa10.14□□□□□ -0.79
HPS4-218ENST00000519774 BRD7Q9NPI1 651 aa10.14□□□□□ -0.79
HPS4-218ENST00000519774 SLCO1C1Q9NYB5 712 aa10.14□□□□□ -0.79
HPS4-218ENST00000519774 GPR160Q9UJ42 338 aa10.14□□□□□ -0.79
HPS4-218ENST00000519774 COPS3Q9UNS2 423 aa10.14□□□□□ -0.79
HPS4-218ENST00000519774 OTOGQ6ZRI0 2925 aa10.13□□□□□ -0.79
HPS4-218ENST00000519774 PLSCR5A0PG75 271 aa10.13□□□□□ -0.79
HPS4-218ENST00000519774 ZNF670-ZNF695F2Z2N8 137 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms