RNA–Protein interactions for RNA: ENST00000519596.5

PABPC1-211, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-211ENST00000519596 LRRC28Q86X40 367 aaPredicted RBP2.28□□□□□ -2.04
PABPC1-211ENST00000519596 APOBEC3FQ8IUX4 373 aaKnown RBP2.28□□□□□ -2.04
PABPC1-211ENST00000519596 SFTPA2Q8IWL1 248 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 ZBTB8OSQ8IWT0 167 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 SLC30A8Q8IWU4 369 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 CMTM1Q8IZ96 169 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 ZSCAN4Q8NAM6 433 aaPredicted RBP2.28□□□□□ -2.04
PABPC1-211ENST00000519596 OR4M2Q8NGB6 313 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 RDH11Q8TC12 318 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 FNDC8Q8TC99 324 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 SFXN5Q8TD22 340 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 CD200R1Q8TD46 325 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 TNFAIP8L1Q8WVP5 186 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 DNAJC9Q8WXX5 260 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 OR8D1Q8WZ84 308 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 RGP1Q92546 391 aaPredicted RBP2.28□□□□□ -2.04
PABPC1-211ENST00000519596 UCN3Q969E3 161 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 NEIL2Q969S2 332 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 NTNG2Q96CW9 530 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 CPNE2Q96FN4 548 aaPredicted RBP2.28□□□□□ -2.04
PABPC1-211ENST00000519596 IMP4Q96G21 291 aaKnown RBP2.28□□□□□ -2.04
PABPC1-211ENST00000519596 BTF3L4Q96K17 158 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 CAPZA3Q96KX2 299 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 NIPSNAP3BQ9BS92 247 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 SLC25A33Q9BSK2 321 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 TMEM208Q9BTX3 173 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 GGACTQ9BVM4 153 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 NUDT9Q9BW91 350 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 CDCA4Q9BXL8 241 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 COMMD4Q9H0A8 199 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 IL25Q9H293 177 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 MIXL1Q9H2W2 232 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 FAM96AQ9H5X1 160 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 UBE2ZQ9H832 354 aaPredicted RBP2.28□□□□□ -2.04
PABPC1-211ENST00000519596 PANK3Q9H999 370 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 NHEJ1Q9H9Q4 299 aaPredicted RBP2.28□□□□□ -2.04
PABPC1-211ENST00000519596 EBF2Q9HAK2 575 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 MIEF1Q9NQG6 463 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 AGPAT4Q9NRZ5 378 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 FGF21Q9NSA1 209 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 MCUBQ9NWR8 336 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 C2orf42Q9NWW7 574 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 CISD1Q9NZ45 108 aaKnown RBP2.28□□□□□ -2.04
PABPC1-211ENST00000519596 NPAP1Q9NZP6 1156 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 IL17CQ9P0M4 197 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 B3GAT1Q9P2W7 334 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 PRODH2Q9UF12 536 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 SAMD4AQ9UPU9 718 aaKnown RBP2.28□□□□□ -2.04
PABPC1-211ENST00000519596 ANGPT4Q9Y264 503 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 KLHDC2Q9Y2U9 406 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 NSG2Q9Y328 171 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 SNX24Q9Y343 169 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 MRPS18CQ9Y3D5 142 aaKnown RBP2.28□□□□□ -2.04
PABPC1-211ENST00000519596 TMED3Q9Y3Q3 217 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 RPL36Q9Y3U8 105 aaKnown RBP2.28□□□□□ -2.04
PABPC1-211ENST00000519596 COLEC10Q9Y6Z7 277 aa2.28□□□□□ -2.04
PABPC1-211ENST00000519596 UHRF1BP1LA0JNW5 1464 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 NUP153P49790 1475 aaKnown RBP2.27□□□□□ -2.05
PABPC1-211ENST00000519596 SOGA1O94964 1423 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 SAA2-SAA4A0A096LPE2 208 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 IGLV5-52A0A0A0MRZ9 124 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 IGHV4-28A0A0C4DH34 117 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 A0A1B0GU03 582 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 TSPAN11A1L157 253 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 TRABD2BA6NFA1 517 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 FAM74A7A6NL05 159 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 CLDN24A6NM45 220 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 EVPLLA8MZ36 301 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 HACD1B0YJ81 288 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 ANHXE9PGG2 379 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 G3V2T6 193 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 G3V4G9 280 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 C15orf65H3BRN8 121 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 J3QLI3 93 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 BMPR1BO00238 502 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 GPR31O00270 319 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 PLPP1O14494 284 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 ZNF195O14628 629 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 SH2D1BO14796 132 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 TIMM23O14925 209 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 CRXO43186 299 aaPredicted RBP2.27□□□□□ -2.05
PABPC1-211ENST00000519596 SPINT2O43291 252 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 ERI3O43414 337 aaKnown RBP2.27□□□□□ -2.05
PABPC1-211ENST00000519596 MPZL2O60487 215 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 MPDU1O75352 247 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 EIF3GO75821 320 aaKnown RBP eCLIP2.27□□□□□ -2.05
PABPC1-211ENST00000519596 OR2J2O76002 312 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 SUPT7LO94864 414 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 JCHAINP01591 159 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 IGHG3P01860 377 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 IGHG4P01861 327 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 TYMSP04818 313 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 GIPP09681 153 aaPredicted RBP2.27□□□□□ -2.05
PABPC1-211ENST00000519596 TACSTD2P09758 323 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 TSPAN19P0C672 248 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 METTL15P1P0C7V9 234 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 MBL2P11226 248 aaPredicted RBP2.27□□□□□ -2.05
PABPC1-211ENST00000519596 CD1EP15812 388 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 ABOP16442 354 aa2.27□□□□□ -2.05
PABPC1-211ENST00000519596 MGMTP16455 207 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms