RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 MMP17Q9ULZ9 603 aa-2.19□□□□□ -2.76
RNU6-542P-201ENST00000516405 FARSAQ9Y285 508 aaKnown RBP-2.19□□□□□ -2.76
RNU6-542P-201ENST00000516405 ZFP30Q9Y2G7 519 aa-2.19□□□□□ -2.76
RNU6-542P-201ENST00000516405 TRAV39A0A0B4J263 110 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 URADA6NGE7 173 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 NVLO15381 856 aaKnown RBP-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 ZNF737O75373 536 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 IGKV1D-33P01593 117 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 IGKV1-33P01594 117 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 SFTPBP07988 381 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 SOD3P08294 240 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 ANXA3P12429 323 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 POLR2EP19388 210 aaKnown RBP-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 PRKACBP22694 351 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 MAGEA1P43355 309 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 HSD17B7P56937 341 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 CHI3L2Q15782 390 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 PTPN20Q4JDL3 420 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 ERN2Q76MJ5 926 aaKnown RBP-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 SLC16A14Q7RTX9 510 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 TPRA1Q86W33 373 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 CBWD2Q8IUF1 395 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 ORMDL3Q8N138 153 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 OR10A7Q8NGE5 316 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 OR52M1Q8NGK5 317 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 OR1J4Q8NGS1 313 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 OR10J6PQ8NGY7 276 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 FAM213BQ8TBF2 198 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 UBLCP1Q8WVY7 318 aaPredicted RBP-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 TMEM186Q96B77 213 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 TAMM41Q96BW9 452 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 SLC25A36Q96CQ1 311 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 IFT74Q96LB3 600 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 PGLYRP3Q96LB9 341 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 VPS35Q96QK1 796 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 RPF2Q9H7B2 306 aaKnown RBP-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 SRD5A3Q9H8P0 318 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 NSMCE4AQ9NXX6 385 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 SLC17A4Q9Y2C5 497 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 CEP170Q5SW79 1584 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 CSPG4Q6UVK1 2322 aa-2.2□□□□□ -2.76
RNU6-542P-201ENST00000516405 A0A087X0M5 115 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 A0A1B0GX30 115 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 GMNCA6NCL1 334 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 H3BMM0 161 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 M0R378 163 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 TNFRSF11BO00300 401 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 CHMP2AO43633 222 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 SCO1O75880 301 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 ZNF682O95780 498 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 EIF4EP06730 217 aaKnown RBP-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 PSKH1P11801 424 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 CTLA4P16410 223 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 CD70P32970 193 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 MAN1A1P33908 653 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 CASP9P55211 416 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 ZNF726P1Q15940 193 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 HYAL4Q2M3T9 481 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 C9orf152Q5JTZ5 239 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 SPATA31B1PQ5VZV4 182 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 CNSTQ6PJW8 725 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 CD300LGQ6UXG3 332 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 OR1L1Q8NH94 360 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 URGCPQ8TCY9 931 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 HTR3CQ8WXA8 447 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 MRPS31Q92665 395 aaKnown RBP-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 UBE2WQ96B02 151 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 DDIT4LQ96D03 193 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 MRPL38Q96DV4 380 aaKnown RBP-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 MED8Q96G25 268 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 SLC35A5Q9BS91 424 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 SIGLEC1Q9BZZ2 1709 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 CHST5Q9GZS9 411 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 GBA3Q9H227 469 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 UFSP2Q9NUQ7 469 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 NUDT15Q9NV35 164 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 MRPL39Q9NYK5 338 aaKnown RBP-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 MINOS1-NBL1R4GNA1 71 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 UBN2Q6ZU65 1347 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 PI4KAP42356 2102 aa-2.21□□□□□ -2.76
RNU6-542P-201ENST00000516405 COL18A1P39060 1754 aa-2.22□□□□□ -2.76
RNU6-542P-201ENST00000516405 A0A0J9YYE9 177 aa-2.22□□□□□ -2.76
RNU6-542P-201ENST00000516405 LINC00854A0A1B0GVQ3 168 aa-2.22□□□□□ -2.76
RNU6-542P-201ENST00000516405 RGSL1A5PLK6 1076 aa-2.22□□□□□ -2.76
RNU6-542P-201ENST00000516405 OR6C74A6NCV1 312 aa-2.22□□□□□ -2.76
RNU6-542P-201ENST00000516405 WASHC1A8K0Z3 465 aa-2.22□□□□□ -2.76
RNU6-542P-201ENST00000516405 B4E171 279 aa-2.22□□□□□ -2.76
RNU6-542P-201ENST00000516405 WASH3PC4AMC7 463 aa-2.22□□□□□ -2.76
RNU6-542P-201ENST00000516405 CXCL13O43927 109 aa-2.22□□□□□ -2.76
RNU6-542P-201ENST00000516405 KLHL41O60662 606 aa-2.22□□□□□ -2.76
RNU6-542P-201ENST00000516405 SMPD2O60906 423 aa-2.22□□□□□ -2.76
RNU6-542P-201ENST00000516405 SERPINB7O75635 380 aa-2.22□□□□□ -2.76
RNU6-542P-201ENST00000516405 TRBC1P01850 177 aa-2.22□□□□□ -2.76
RNU6-542P-201ENST00000516405 CPMP14384 443 aa-2.22□□□□□ -2.76
RNU6-542P-201ENST00000516405 RAB3BP20337 219 aa-2.22□□□□□ -2.76
RNU6-542P-201ENST00000516405 CAPN3P20807 821 aa-2.22□□□□□ -2.76
RNU6-542P-201ENST00000516405 DDOSTP39656 456 aa-2.22□□□□□ -2.76
RNU6-542P-201ENST00000516405 TSPAN7P41732 249 aa-2.22□□□□□ -2.76
RNU6-542P-201ENST00000516405 CDKN1BP46527 198 aa-2.22□□□□□ -2.76
RNU6-542P-201ENST00000516405 RAP1GDS1P52306 607 aa-2.22□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms