RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 KPTNQ9Y664 436 aa8.6□□□□□ -1.03
CLDND1-231ENST00000515620 MEIOCA2RUB1 952 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 NPIPB13A6NJU9 1138 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 IQCF6A8MYZ5 107 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 NPIPB4C9JG80 1138 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 H3BUX3 64 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 J3QW42 95 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 DVL1O14640 695 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 BIRC5O15392 142 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 SHOX2O60902 331 aaPredicted RBP8.59□□□□□ -1.03
CLDND1-231ENST00000515620 GYPAP02724 150 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 DBHP09172 617 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 SAA4P35542 130 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 RAD23AP54725 363 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 DLX1P56177 255 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 GUCA2AQ02747 115 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 LAPTM4AQ15012 233 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 LY6EQ16553 131 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 DUSP7Q16829 419 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 INTS11Q5TA45 600 aaKnown RBP8.59□□□□□ -1.03
CLDND1-231ENST00000515620 OTPQ5XKR4 325 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 PGBD2Q6P3X8 592 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 NDUFA11Q86Y39 141 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 PNKDQ8N490 385 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 PCYOX1LQ8NBM8 494 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 GPR32P1Q8NGA4 272 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 NPRL2Q8WTW4 380 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 RASD2Q96D21 266 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 SGTBQ96EQ0 304 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 PRSS27Q9BQR3 290 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 IKZF5Q9H5V7 419 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 TMEM38AQ9H6F2 299 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 CNTD2Q9H8S5 307 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 SDR39U1Q9NRG7 319 aaPredicted RBP8.59□□□□□ -1.03
CLDND1-231ENST00000515620 C20orf141Q9NUB4 165 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 TMEM100Q9NV29 134 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 RNF7Q9UBF6 113 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 RPUSD1Q9UJJ7 312 aaKnown RBP8.59□□□□□ -1.03
CLDND1-231ENST00000515620 DNAH3Q8TD57 4116 aa8.59□□□□□ -1.03
CLDND1-231ENST00000515620 A0A1B0GWJ7 208 aa8.58□□□□□ -1.04
CLDND1-231ENST00000515620 TRPC5OSA6NMA1 111 aa8.58□□□□□ -1.04
CLDND1-231ENST00000515620 ADARB2-AS1A8MUL3 147 aa8.58□□□□□ -1.04
CLDND1-231ENST00000515620 H7C1C5 153 aa8.58□□□□□ -1.04
CLDND1-231ENST00000515620 FBP2O00757 339 aa8.58□□□□□ -1.04
CLDND1-231ENST00000515620 ECDO95905 644 aaPredicted RBP8.58□□□□□ -1.04
CLDND1-231ENST00000515620 MT-ND1P03886 318 aa8.58□□□□□ -1.04
CLDND1-231ENST00000515620 VIMP08670 466 aaKnown RBP8.58□□□□□ -1.04
CLDND1-231ENST00000515620 CD247P20963 164 aa8.58□□□□□ -1.04
CLDND1-231ENST00000515620 PPIBP23284 216 aaKnown RBP8.58□□□□□ -1.04
CLDND1-231ENST00000515620 MSX2P35548 267 aaPredicted RBP8.58□□□□□ -1.04
CLDND1-231ENST00000515620 KRTAP10-11P60412 298 aa8.58□□□□□ -1.04
CLDND1-231ENST00000515620 RPL27P61353 136 aaKnown RBP8.58□□□□□ -1.04
CLDND1-231ENST00000515620 LCN6P62502 163 aa8.58□□□□□ -1.04
CLDND1-231ENST00000515620 IFFO1Q0D2I5 559 aa8.58□□□□□ -1.04
CLDND1-231ENST00000515620 STX3Q13277 289 aa8.58□□□□□ -1.04
CLDND1-231ENST00000515620 ALG10Q5BKT4 473 aa8.58□□□□□ -1.04
CLDND1-231ENST00000515620 BLOC1S3Q6QNY0 202 aa8.58□□□□□ -1.04
CLDND1-231ENST00000515620 METAP1DQ6UB28 335 aaPredicted RBP8.58□□□□□ -1.04
CLDND1-231ENST00000515620 CMTM4Q8IZR5 234 aa8.58□□□□□ -1.04
CLDND1-231ENST00000515620 FGFRL1Q8N441 504 aa8.58□□□□□ -1.04
CLDND1-231ENST00000515620 CELF2-AS1Q8N7Q2 184 aa8.58□□□□□ -1.04
CLDND1-231ENST00000515620 OR5L1Q8NGL2 311 aa8.58□□□□□ -1.04
CLDND1-231ENST00000515620 FNDC8Q8TC99 324 aa8.58□□□□□ -1.04
CLDND1-231ENST00000515620 AENQ8WTP8 325 aaKnown RBP8.58□□□□□ -1.04
CLDND1-231ENST00000515620 TMEM255BQ8WV15 326 aa8.58□□□□□ -1.04
CLDND1-231ENST00000515620 ERGIC1Q969X5 290 aa8.58□□□□□ -1.04
CLDND1-231ENST00000515620 CITED2Q99967 270 aaPredicted RBP8.58□□□□□ -1.04
CLDND1-231ENST00000515620 B9D2Q9BPU9 175 aa8.58□□□□□ -1.04
CLDND1-231ENST00000515620 CENPHQ9H3R5 247 aa8.58□□□□□ -1.04
CLDND1-231ENST00000515620 RANBP3Q9H6Z4 567 aaPredicted RBP8.58□□□□□ -1.04
CLDND1-231ENST00000515620 FN3KRPQ9HA64 309 aa8.58□□□□□ -1.04
CLDND1-231ENST00000515620 SLAMF8Q9P0V8 285 aa8.58□□□□□ -1.04
CLDND1-231ENST00000515620 TRAV38-1A0A0B4J264 116 aa8.57□□□□□ -1.04
CLDND1-231ENST00000515620 OR6C6A6NF89 314 aa8.57□□□□□ -1.04
CLDND1-231ENST00000515620 OOEPA6NGQ2 149 aa8.57□□□□□ -1.04
CLDND1-231ENST00000515620 HDAC3O15379 428 aa8.57□□□□□ -1.04
CLDND1-231ENST00000515620 NDUFA2O43678 99 aa8.57□□□□□ -1.04
CLDND1-231ENST00000515620 TSPAN19P0C672 248 aa8.57□□□□□ -1.04
CLDND1-231ENST00000515620 KITP10721 976 aa8.57□□□□□ -1.04
CLDND1-231ENST00000515620 CD200P41217 278 aa8.57□□□□□ -1.04
CLDND1-231ENST00000515620 RGS6P49758 472 aa8.57□□□□□ -1.04
CLDND1-231ENST00000515620 POU4F2Q12837 409 aa8.57□□□□□ -1.04
CLDND1-231ENST00000515620 AQP6Q13520 282 aa8.57□□□□□ -1.04
CLDND1-231ENST00000515620 HABP2Q14520 560 aaPredicted RBP8.57□□□□□ -1.04
CLDND1-231ENST00000515620 BEND6Q5SZJ8 279 aaPredicted RBP8.57□□□□□ -1.04
CLDND1-231ENST00000515620 LRIF1Q5T3J3 769 aa8.57□□□□□ -1.04
CLDND1-231ENST00000515620 FAM90A1Q86YD7 464 aa8.57□□□□□ -1.04
CLDND1-231ENST00000515620 OR1F12Q8NHA8 337 aa8.57□□□□□ -1.04
CLDND1-231ENST00000515620 ANP32BQ92688 251 aaKnown RBP8.57□□□□□ -1.04
CLDND1-231ENST00000515620 APOBEC3DQ96AK3 386 aaPredicted RBP8.57□□□□□ -1.04
CLDND1-231ENST00000515620 ZNF583Q96ND8 569 aa8.57□□□□□ -1.04
CLDND1-231ENST00000515620 NKX3-1Q99801 234 aaPredicted RBP8.57□□□□□ -1.04
CLDND1-231ENST00000515620 CPPED1Q9BRF8 314 aaPredicted RBP8.57□□□□□ -1.04
CLDND1-231ENST00000515620 WACQ9BTA9 647 aa8.57□□□□□ -1.04
CLDND1-231ENST00000515620 TRIM36Q9NQ86 728 aa8.57□□□□□ -1.04
CLDND1-231ENST00000515620 VAPAQ9P0L0 249 aa8.57□□□□□ -1.04
CLDND1-231ENST00000515620 MAB21L2Q9Y586 359 aa8.57□□□□□ -1.04
CLDND1-231ENST00000515620 PCDHGB5Q9Y5G0 923 aa8.57□□□□□ -1.04
CLDND1-231ENST00000515620 IGHV3OR15-7A0A075B7D8 119 aa8.56□□□□□ -1.04
CLDND1-231ENST00000515620 A0A1B0GW55 424 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms