RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 LINC01560Q8TB33 94 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 SNX33Q8WV41 574 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 ITFG2Q969R8 447 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 RADILQ96JH8 1075 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 TBX5Q99593 518 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 MND1Q9BWT6 205 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 ESRP2Q9H6T0 727 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 SP140LQ9H930 580 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 ELOVL3Q9HB03 270 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 TUBG2Q9NRH3 451 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 CHCHD3Q9NX63 227 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 KCNN3Q9UGI6 736 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 ERGIC3Q9Y282 383 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 CADP27708 2225 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 IGHV2OR16-5A0A0B4J2B6 119 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 DPRXA6NFQ7 191 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 M0R135 149 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 MT-ND2P03891 347 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 MT-ND5P03915 603 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 CELA3BP08861 270 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 TGM4P49221 684 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 ZNF83P51522 516 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 PSMA6P60900 246 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 NAAAQ02083 359 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 BDH1Q02338 343 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 TAF13Q15543 124 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 ZNF829Q3KNS6 432 aaPredicted RBP10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 CCDC58Q4VC31 144 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 LIPNQ5VXI9 398 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 TMEM154Q6P9G4 183 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 ARL9Q6T311 187 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 LRRN1Q6UXK5 716 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 UNQ6126/PRO20091Q6UXV3 157 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 PRSS45Q7RTY3 260 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 FAM220AQ7Z4H9 259 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 MYPOPQ86VE0 399 aaPredicted RBP10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 WFDC8Q8IUA0 241 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 SGCDQ92629 289 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 RNF166Q96A37 237 aaPredicted RBP10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 ZNF799Q96GE5 643 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 MS4A3Q96HJ5 214 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 COG8Q96MW5 612 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 DOK1Q99704 481 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 C1QTNF5Q9BXJ0 243 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 MOB1AQ9H8S9 216 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 ISYNA1Q9NPH2 558 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 CENPMQ9NSP4 180 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 TBCCD1Q9NVR7 557 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 CRIM1Q9NZV1 1036 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 CLEC2DQ9UHP7 191 aa10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 LSM2Q9Y333 95 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-220ENST00000514830 PLCE1Q9P212 2302 aa10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 FAM221AA4D161 298 aa10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 DEFB108AA8MXU0 73 aa10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 PRSS44E7EML9 344 aa10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 M0R1B8 84 aa10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 CASKO14936 926 aa10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 MYL12BO14950 172 aa10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 CRYAAP02489 173 aa10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 EEF1B2P24534 225 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 LOXP28300 417 aaPredicted RBP10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 HSD11B1P28845 292 aa10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 CCR9P51686 369 aa10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 WNT4P56705 351 aa10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 OR12D2P58182 307 aa10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 MEX3BQ6ZN04 569 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 SPARTQ8N0X7 666 aa10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 SVOPQ8N4V2 548 aa10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 RPS4Y2Q8TD47 263 aa10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 FCGR1BQ92637 280 aa10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 APOBEC3DQ96AK3 386 aaPredicted RBP10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 PELI1Q96FA3 418 aa10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 C4orf36Q96KX1 117 aa10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 C4orf45Q96LM5 186 aa10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 TMEM204Q9BSN7 226 aa10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 CDH20Q9HBT6 801 aa10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 FAM206AQ9NX38 181 aa10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 BABAM2Q9NXR7 383 aa10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 ZNF391Q9UJN7 358 aa10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 IKZF2Q9UKS7 526 aa10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 R4GMQ9 66 aa10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 HRNRQ86YZ3 2850 aaPredicted RBP10.36□□□□□ -0.75
PDLIM5-220ENST00000514830 A0A087WXM4 84 aa10.35□□□□□ -0.75
PDLIM5-220ENST00000514830 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.35□□□□□ -0.75
PDLIM5-220ENST00000514830 C5orf49A4QMS7 147 aa10.35□□□□□ -0.75
PDLIM5-220ENST00000514830 H3BSA7 217 aa10.35□□□□□ -0.75
PDLIM5-220ENST00000514830 SIAH2O43255 324 aa10.35□□□□□ -0.75
PDLIM5-220ENST00000514830 CD1AP06126 327 aa10.35□□□□□ -0.75
PDLIM5-220ENST00000514830 RPSAP08865 295 aaKnown RBP10.35□□□□□ -0.75
PDLIM5-220ENST00000514830 DBHP09172 617 aa10.35□□□□□ -0.75
PDLIM5-220ENST00000514830 PCMT1P22061 227 aa10.35□□□□□ -0.75
PDLIM5-220ENST00000514830 NR4A1P22736 598 aa10.35□□□□□ -0.75
PDLIM5-220ENST00000514830 CALCRP30988 508 aa10.35□□□□□ -0.75
PDLIM5-220ENST00000514830 RAD52P43351 418 aa10.35□□□□□ -0.75
PDLIM5-220ENST00000514830 CX3CR1P49238 355 aa10.35□□□□□ -0.75
PDLIM5-220ENST00000514830 RIPPLY3P57055 190 aa10.35□□□□□ -0.75
PDLIM5-220ENST00000514830 TAS2R43P59537 309 aa10.35□□□□□ -0.75
PDLIM5-220ENST00000514830 NKX6-1P78426 367 aaPredicted RBP10.35□□□□□ -0.75
PDLIM5-220ENST00000514830 EMX1Q04741 257 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms