RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 APOBEC3DQ96AK3 386 aaPredicted RBP11.18□□□□□ -0.62
PFDN1-206ENST00000514611 IFT27Q9BW83 186 aa11.18□□□□□ -0.62
PFDN1-206ENST00000514611 PLA2G12AQ9BZM1 189 aa11.18□□□□□ -0.62
PFDN1-206ENST00000514611 MAGEL2Q9UJ55 1249 aa11.18□□□□□ -0.62
PFDN1-206ENST00000514611 INSIG2Q9Y5U4 225 aa11.18□□□□□ -0.62
PFDN1-206ENST00000514611 OR6C68A6NDL8 312 aa11.17□□□□□ -0.62
PFDN1-206ENST00000514611 IQCF6A8MYZ5 107 aa11.17□□□□□ -0.62
PFDN1-206ENST00000514611 F5H5K5 113 aa11.17□□□□□ -0.62
PFDN1-206ENST00000514611 F5H5P2 479 aa11.17□□□□□ -0.62
PFDN1-206ENST00000514611 ARPC2O15144 300 aa11.17□□□□□ -0.62
PFDN1-206ENST00000514611 SNX3O60493 162 aa11.17□□□□□ -0.62
PFDN1-206ENST00000514611 RENP00797 406 aa11.17□□□□□ -0.62
PFDN1-206ENST00000514611 HLA-DPB1P04440 258 aa11.17□□□□□ -0.62
PFDN1-206ENST00000514611 UBA52P62987 128 aaKnown RBP11.17□□□□□ -0.62
PFDN1-206ENST00000514611 RSPO1Q2MKA7 263 aaPredicted RBP11.17□□□□□ -0.62
PFDN1-206ENST00000514611 KRTAP27-1Q3LI81 207 aa11.17□□□□□ -0.62
PFDN1-206ENST00000514611 ESCO2Q56NI9 601 aa11.17□□□□□ -0.62
PFDN1-206ENST00000514611 FAM201AQ5SY85 155 aa11.17□□□□□ -0.62
PFDN1-206ENST00000514611 ZNF620Q6ZNG0 422 aa11.17□□□□□ -0.62
PFDN1-206ENST00000514611 MOGAT3Q86VF5 341 aa11.17□□□□□ -0.62
PFDN1-206ENST00000514611 PGAM4Q8N0Y7 254 aa11.17□□□□□ -0.62
PFDN1-206ENST00000514611 SIGLECL1Q8N7X8 197 aa11.17□□□□□ -0.62
PFDN1-206ENST00000514611 OR5L1Q8NGL2 311 aa11.17□□□□□ -0.62
PFDN1-206ENST00000514611 OR13G1Q8NGZ3 307 aa11.17□□□□□ -0.62
PFDN1-206ENST00000514611 POP5Q969H6 163 aaKnown RBP11.17□□□□□ -0.62
PFDN1-206ENST00000514611 ZNF582Q96NG8 517 aaPredicted RBP11.17□□□□□ -0.62
PFDN1-206ENST00000514611 DUX5Q96PT3 197 aa11.17□□□□□ -0.62
PFDN1-206ENST00000514611 SLC30A2Q9BRI3 323 aa11.17□□□□□ -0.62
PFDN1-206ENST00000514611 PNRC2Q9NPJ4 139 aaKnown RBP11.17□□□□□ -0.62
PFDN1-206ENST00000514611 ZNF69Q9UC07 566 aa11.17□□□□□ -0.62
PFDN1-206ENST00000514611 POLR3KQ9Y2Y1 108 aaPredicted RBP11.17□□□□□ -0.62
PFDN1-206ENST00000514611 AUP1Q9Y679 476 aa11.17□□□□□ -0.62
PFDN1-206ENST00000514611 ARHGAP32A7KAX9 2087 aa11.16□□□□□ -0.62
PFDN1-206ENST00000514611 ARPC3O15145 178 aa11.16□□□□□ -0.62
PFDN1-206ENST00000514611 FABP3P05413 133 aa11.16□□□□□ -0.62
PFDN1-206ENST00000514611 ACSM4P0C7M7 580 aa11.16□□□□□ -0.62
PFDN1-206ENST00000514611 HSD17B1P14061 328 aa11.16□□□□□ -0.62
PFDN1-206ENST00000514611 RPS2P15880 293 aaKnown RBP11.16□□□□□ -0.62
PFDN1-206ENST00000514611 ANOS1P23352 680 aa11.16□□□□□ -0.62
PFDN1-206ENST00000514611 FPR2P25090 351 aa11.16□□□□□ -0.62
PFDN1-206ENST00000514611 NOS3P29474 1203 aa11.16□□□□□ -0.62
PFDN1-206ENST00000514611 GGT2P36268 569 aa11.16□□□□□ -0.62
PFDN1-206ENST00000514611 RPS27P42677 84 aaKnown RBP11.16□□□□□ -0.62
PFDN1-206ENST00000514611 HOXA4Q00056 320 aaPredicted RBP11.16□□□□□ -0.62
PFDN1-206ENST00000514611 AWAT1Q58HT5 328 aa11.16□□□□□ -0.62
PFDN1-206ENST00000514611 CLEC12AQ5QGZ9 265 aa11.16□□□□□ -0.62
PFDN1-206ENST00000514611 SLC35F1Q5T1Q4 408 aa11.16□□□□□ -0.62
PFDN1-206ENST00000514611 PGBD2Q6P3X8 592 aa11.16□□□□□ -0.62
PFDN1-206ENST00000514611 COLCA1Q6ZS62 124 aa11.16□□□□□ -0.62
PFDN1-206ENST00000514611 NAA40Q86UY6 237 aa11.16□□□□□ -0.62
PFDN1-206ENST00000514611 ZBTB46Q86UZ6 589 aa11.16□□□□□ -0.62
PFDN1-206ENST00000514611 BCL6BQ8N143 479 aaPredicted RBP11.16□□□□□ -0.62
PFDN1-206ENST00000514611 MUC20Q8N307 709 aaPredicted RBP11.16□□□□□ -0.62
PFDN1-206ENST00000514611 C3orf56Q8N813 242 aa11.16□□□□□ -0.62
PFDN1-206ENST00000514611 OR52E2Q8NGJ4 325 aa11.16□□□□□ -0.62
PFDN1-206ENST00000514611 MCUR1Q96AQ8 359 aa11.16□□□□□ -0.62
PFDN1-206ENST00000514611 NSMCE2Q96MF7 247 aa11.16□□□□□ -0.62
PFDN1-206ENST00000514611 ZNF48Q96MX3 618 aaPredicted RBP11.16□□□□□ -0.62
PFDN1-206ENST00000514611 PITX2Q99697 317 aa11.16□□□□□ -0.62
PFDN1-206ENST00000514611 ATF6BQ99941 703 aa11.16□□□□□ -0.62
PFDN1-206ENST00000514611 C1QTNF5Q9BXJ0 243 aa11.16□□□□□ -0.62
PFDN1-206ENST00000514611 EGLN3Q9H6Z9 239 aa11.16□□□□□ -0.62
PFDN1-206ENST00000514611 MRPL22Q9NWU5 206 aaKnown RBP11.16□□□□□ -0.62
PFDN1-206ENST00000514611 OR5V1Q9UGF6 321 aa11.16□□□□□ -0.62
PFDN1-206ENST00000514611 CD300AQ9UGN4 299 aa11.16□□□□□ -0.62
PFDN1-206ENST00000514611 CYB5R1Q9UHQ9 305 aa11.16□□□□□ -0.62
PFDN1-206ENST00000514611 NUP50Q9UKX7 468 aa11.16□□□□□ -0.62
PFDN1-206ENST00000514611 DYSFO75923 2080 aa11.16□□□□□ -0.62
PFDN1-206ENST00000514611 IGHV3OR16-10A0A075B7F0 116 aa11.15□□□□□ -0.62
PFDN1-206ENST00000514611 HLA-DQA2P01906 255 aa11.15□□□□□ -0.62
PFDN1-206ENST00000514611 WNT2P09544 360 aa11.15□□□□□ -0.62
PFDN1-206ENST00000514611 PSKH1P11801 424 aa11.15□□□□□ -0.62
PFDN1-206ENST00000514611 PMELP40967 661 aa11.15□□□□□ -0.62
PFDN1-206ENST00000514611 GSSP48637 474 aa11.15□□□□□ -0.62
PFDN1-206ENST00000514611 SRP9P49458 86 aaKnown RBP11.15□□□□□ -0.62
PFDN1-206ENST00000514611 SMIM11AP58511 58 aa11.15□□□□□ -0.62
PFDN1-206ENST00000514611 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.15□□□□□ -0.62
PFDN1-206ENST00000514611 TRAP1Q12931 704 aaKnown RBP11.15□□□□□ -0.62
PFDN1-206ENST00000514611 GK2Q14410 553 aaPredicted RBP11.15□□□□□ -0.62
PFDN1-206ENST00000514611 TUSC1Q2TAM9 212 aa11.15□□□□□ -0.62
PFDN1-206ENST00000514611 SAMD4BQ5PRF9 694 aaKnown RBP11.15□□□□□ -0.62
PFDN1-206ENST00000514611 SLC27A4Q6P1M0 643 aa11.15□□□□□ -0.62
PFDN1-206ENST00000514611 LYPD4Q6UWN0 246 aa11.15□□□□□ -0.62
PFDN1-206ENST00000514611 KLBQ86Z14 1044 aa11.15□□□□□ -0.62
PFDN1-206ENST00000514611 OR9Q2Q8NGE9 314 aa11.15□□□□□ -0.62
PFDN1-206ENST00000514611 MAP6Q96JE9 813 aa11.15□□□□□ -0.62
PFDN1-206ENST00000514611 C1orf147Q96MC9 270 aaPredicted RBP11.15□□□□□ -0.62
PFDN1-206ENST00000514611 TMEM246Q9BRR3 403 aa11.15□□□□□ -0.62
PFDN1-206ENST00000514611 MRI1Q9BV20 369 aa11.15□□□□□ -0.62
PFDN1-206ENST00000514611 SSBP3Q9BWW4 388 aaPredicted RBP11.15□□□□□ -0.62
PFDN1-206ENST00000514611 NSRP1Q9H0G5 558 aaKnown RBP11.15□□□□□ -0.62
PFDN1-206ENST00000514611 NTN4Q9HB63 628 aa11.15□□□□□ -0.62
PFDN1-206ENST00000514611 TMEM165Q9HC07 324 aa11.15□□□□□ -0.62
PFDN1-206ENST00000514611 DDX28Q9NUL7 540 aaKnown RBP11.15□□□□□ -0.62
PFDN1-206ENST00000514611 ARL8BQ9NVJ2 186 aa11.15□□□□□ -0.62
PFDN1-206ENST00000514611 LRCH1Q9Y2L9 728 aa11.15□□□□□ -0.62
PFDN1-206ENST00000514611 TENM1Q9UKZ4 2725 aa11.15□□□□□ -0.63
PFDN1-206ENST00000514611 A0A1B0GWJ7 208 aa11.14□□□□□ -0.63
PFDN1-206ENST00000514611 DNAJC9-AS1A6NH13 148 aa11.14□□□□□ -0.63
PFDN1-206ENST00000514611 LCATP04180 440 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms