RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	OR1E1	P30953	314 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	KLK7	P49862	253 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	GPM6A	P51674	278 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	ZNF763	Q0D2J5	394 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	SLAMF1	Q13291	335 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	MOBP	Q13875	183 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	TNXA	Q16473	311 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	NSUN5P1	Q3KNT7	163 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	TRIM40	Q6P9F5	258 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	DUX4L9	Q6RFH8	374 aa	Predicted RBP	2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	OR2W3	Q7Z3T1	314 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	ZNF547	Q8IVP9	402 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	SYS1	Q8N2H4	156 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	KIF2B	Q8N4N8	673 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	ZNF565	Q8N9K5	539 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	HSD17B11	Q8NBQ5	300 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	NOXO1	Q8NFA2	376 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	OR10G3	Q8NGC4	313 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	OR5K2	Q8NHB8	316 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	CXorf40A	Q8TE69	158 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	C17orf50	Q8WW18	174 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	ACOT11	Q8WXI4	607 aa	Predicted RBP	2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	NDRG1	Q92597	394 aa	Known RBP	2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	PAGE5	Q96GU1	130 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	OR5B12	Q96R08	314 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	SPIN2A	Q99865	258 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	SPIN2B	Q9BPZ2	258 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	UTP23	Q9BRU9	249 aa	Known RBP	2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	PLA2G2F	Q9BZM2	168 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	CHRNA10	Q9GZZ6	450 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	DEFB129	Q9H1M3	183 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	RNF167	Q9H6Y7	350 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	FOLH1B	Q9HBA9	442 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	CD209	Q9NNX6	404 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	GIN1	Q9NXP7	522 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	QPCTL	Q9NXS2	382 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	SLC17A7	Q9P2U7	560 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	DUX4	Q9UBX2	424 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	LGALS13	Q9UHV8	139 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	NXT1	Q9UKK6	140 aa	Known RBP	2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	MMP17	Q9ULZ9	603 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	SAR1B	Q9Y6B6	198 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402		V9GYY9	64 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	PDS5B	Q9NTI5	1447 aa		2.23	□□□□□ -2.05
MATR3-223	ENST00000514402	KIF26A	Q9ULI4	1882 aa	Predicted RBP	2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	MROH7	Q68CQ1	1323 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	IGKV1D-17	A0A075B6S4	117 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	IGHV1OR21-1	A0A087WYE8	117 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402		A0A0G2JN53	185 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	KIR2DL5B	A0A0G2JN68	375 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	KIR2DL5B	A0A0G2JPC4	375 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402		A0A1W2PRF3	423 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402		A0A1W2PRM7	423 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	TSPAN11	A1L157	253 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	MGAT4D	A6NG13	374 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402		E7EWF7	191 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	LOC110117498-PIK3R3	F6TDL0	507 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	CDC7	O00311	574 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	BET1	O15155	118 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	MRPS12	O15235	138 aa	Known RBP	2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	B4GALT5	O43286	388 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	EED	O75530	441 aa	Known RBP	2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	CRTAP	O75718	401 aa	Predicted RBP	2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	ZMPSTE24	O75844	475 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	LSM8	O95777	96 aa	Known RBP	2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	OXT	P01178	125 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	IGLV3-19	P01714	112 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	KLK1	P06870	262 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	GIP	P09681	153 aa	Predicted RBP	2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	RD3L	P0DJH9	198 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	TDGF1	P13385	188 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	BGN	P21810	368 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	IVD	P26440	423 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	RFC3	P40938	356 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	CSNK1A1	P48729	337 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	SSR4	P51571	173 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	TDGF1P3	P51864	188 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	BLVRA	P53004	296 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	DLX1	P56177	255 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	UBE2G2	P60604	165 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	ACTA2	P62736	377 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	ACTG2	P63267	376 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	ACTC1	P68032	377 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	ADARB1	P78563	741 aa	Known RBP	2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	ECH1	Q13011	328 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	PIGH	Q14442	188 aa	Predicted RBP	2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	MAPRE2	Q15555	327 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	LY6E	Q16553	131 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	DEFB116	Q30KQ4	102 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	TPRG1L	Q5T0D9	272 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	MARCH8	Q5T0T0	291 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	PTRHD1	Q6GMV3	140 aa	Known RBP	2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	ADNP2	Q6IQ32	1131 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	APOBEC3H	Q6NTF7	200 aa	Known RBP	2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	C1orf94	Q6P1W5	598 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	TMPRSS11A	Q6ZMR5	421 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	BHLHA15	Q7RTS1	189 aa	Predicted RBP	2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	LHFPL3	Q86UP9	236 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	SLC26A11	Q86WA9	606 aa		2.22	□□□□□ -2.05
MATR3-223	ENST00000514402	RALGPS2	Q86X27	583 aa	Predicted RBP	2.22	□□□□□ -2.05

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms