RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 ZNF611Q8N823 705 aa17.44■□□□□ 0.38
USP53-208ENST00000514305 COG8Q96MW5 612 aa17.44■□□□□ 0.38
USP53-208ENST00000514305 ZNF75AQ96N20 296 aa17.44■□□□□ 0.38
USP53-208ENST00000514305 ATF6BQ99941 703 aa17.44■□□□□ 0.38
USP53-208ENST00000514305 NIPAL2Q9H841 368 aa17.44■□□□□ 0.38
USP53-208ENST00000514305 CENPMQ9NSP4 180 aa17.44■□□□□ 0.38
USP53-208ENST00000514305 SCN3BQ9NY72 215 aa17.44■□□□□ 0.38
USP53-208ENST00000514305 ROS1P08922 2347 aa17.44■□□□□ 0.38
USP53-208ENST00000514305 LY6G6DO95868 133 aa17.43■□□□□ 0.38
USP53-208ENST00000514305 PLAUP00749 431 aa17.43■□□□□ 0.38
USP53-208ENST00000514305 DBTP11182 482 aaKnown RBP17.43■□□□□ 0.38
USP53-208ENST00000514305 CCNOP22674 350 aa17.43■□□□□ 0.38
USP53-208ENST00000514305 APEX1P27695 318 aaKnown RBP17.43■□□□□ 0.38
USP53-208ENST00000514305 RAD52P43351 418 aa17.43■□□□□ 0.38
USP53-208ENST00000514305 RGS6P49758 472 aa17.43■□□□□ 0.38
USP53-208ENST00000514305 TPTEP56180 551 aa17.43■□□□□ 0.38
USP53-208ENST00000514305 CXCR4P61073 352 aa17.43■□□□□ 0.38
USP53-208ENST00000514305 RPS23P62266 143 aaKnown RBP17.43■□□□□ 0.38
USP53-208ENST00000514305 CCDC92Q53HC0 331 aaPredicted RBP17.43■□□□□ 0.38
USP53-208ENST00000514305 LYPD4Q6UWN0 246 aa17.43■□□□□ 0.38
USP53-208ENST00000514305 B3GLCTQ6Y288 498 aa17.43■□□□□ 0.38
USP53-208ENST00000514305 CIARTQ8N365 385 aaPredicted RBP17.43■□□□□ 0.38
USP53-208ENST00000514305 SLAMF6Q96DU3 332 aa17.43■□□□□ 0.38
USP53-208ENST00000514305 TMEM204Q9BSN7 226 aa17.43■□□□□ 0.38
USP53-208ENST00000514305 COPS4Q9BT78 406 aa17.43■□□□□ 0.38
USP53-208ENST00000514305 ABHD6Q9BV23 337 aa17.43■□□□□ 0.38
USP53-208ENST00000514305 MROQ9BYG7 248 aa17.43■□□□□ 0.38
USP53-208ENST00000514305 ADGRL4Q9HBW9 690 aa17.43■□□□□ 0.38
USP53-208ENST00000514305 MRPS18AQ9NVS2 196 aaKnown RBP17.43■□□□□ 0.38
USP53-208ENST00000514305 C5orf49A4QMS7 147 aa17.42■□□□□ 0.38
USP53-208ENST00000514305 TRIM64A6NGJ6 449 aa17.42■□□□□ 0.38
USP53-208ENST00000514305 TRIM64BA6NI03 449 aa17.42■□□□□ 0.38
USP53-208ENST00000514305 SYNGR3O43761 229 aa17.42■□□□□ 0.38
USP53-208ENST00000514305 ZNF254O75437 659 aa17.42■□□□□ 0.38
USP53-208ENST00000514305 GNAO1P09471 354 aa17.42■□□□□ 0.38
USP53-208ENST00000514305 H2BFMP0C1H6 154 aa17.42■□□□□ 0.38
USP53-208ENST00000514305 ALOX5APP20292 161 aa17.42■□□□□ 0.38
USP53-208ENST00000514305 TUBG1P23258 451 aa17.42■□□□□ 0.38
USP53-208ENST00000514305 HSD11B1P28845 292 aa17.42■□□□□ 0.38
USP53-208ENST00000514305 PCSK6P29122 969 aa17.42■□□□□ 0.38
USP53-208ENST00000514305 ZNF91Q05481 1191 aa17.42■□□□□ 0.38
USP53-208ENST00000514305 KRT77Q7Z794 578 aa17.42■□□□□ 0.38
USP53-208ENST00000514305 CPEB3Q8NE35 698 aaKnown RBP17.42■□□□□ 0.38
USP53-208ENST00000514305 CNIH3Q8TBE1 160 aa17.42■□□□□ 0.38
USP53-208ENST00000514305 AKAP1Q92667 903 aaKnown RBP eCLIP17.42■□□□□ 0.38
USP53-208ENST00000514305 POM121L2Q96KW2 1035 aa17.42■□□□□ 0.38
USP53-208ENST00000514305 BCL2L14Q9BZR8 327 aa17.42■□□□□ 0.38
USP53-208ENST00000514305 NOX3Q9HBY0 568 aa17.42■□□□□ 0.38
USP53-208ENST00000514305 TUBG2Q9NRH3 451 aa17.42■□□□□ 0.38
USP53-208ENST00000514305 INPP5EQ9NRR6 644 aa17.42■□□□□ 0.38
USP53-208ENST00000514305 PLCXD1Q9NUJ7 323 aa17.42■□□□□ 0.38
USP53-208ENST00000514305 CHCHD3Q9NX63 227 aaKnown RBP17.42■□□□□ 0.38
USP53-208ENST00000514305 EXOGQ9Y2C4 368 aaKnown RBP17.42■□□□□ 0.38
USP53-208ENST00000514305 PRR14LQ5THK1 2151 aa17.41■□□□□ 0.38
USP53-208ENST00000514305 IGHV2OR16-5A0A0B4J2B6 119 aa17.41■□□□□ 0.38
USP53-208ENST00000514305 EFCAB10A6NFE3 127 aa17.41■□□□□ 0.38
USP53-208ENST00000514305 J3QW42 95 aa17.41■□□□□ 0.38
USP53-208ENST00000514305 PAX1P15863 534 aa17.41■□□□□ 0.38
USP53-208ENST00000514305 EGR3Q06889 387 aa17.41■□□□□ 0.38
USP53-208ENST00000514305 DBPQ10586 325 aaPredicted RBP17.41■□□□□ 0.38
USP53-208ENST00000514305 OTPQ5XKR4 325 aa17.41■□□□□ 0.38
USP53-208ENST00000514305 CFAP77Q6ZQR2 320 aa17.41■□□□□ 0.38
USP53-208ENST00000514305 EGFL6Q8IUX8 553 aa17.41■□□□□ 0.38
USP53-208ENST00000514305 ZNF584Q8IVC4 421 aa17.41■□□□□ 0.38
USP53-208ENST00000514305 ACBD7Q8N6N7 88 aa17.41■□□□□ 0.38
USP53-208ENST00000514305 OR10H4Q8NGA5 316 aa17.41■□□□□ 0.38
USP53-208ENST00000514305 OR5L1Q8NGL2 311 aa17.41■□□□□ 0.38
USP53-208ENST00000514305 ST7LQ8TDW4 575 aa17.41■□□□□ 0.38
USP53-208ENST00000514305 FBLIM1Q8WUP2 373 aa17.41■□□□□ 0.38
USP53-208ENST00000514305 RNF133Q8WVZ7 376 aa17.41■□□□□ 0.38
USP53-208ENST00000514305 APH1BQ8WW43 257 aa17.41■□□□□ 0.38
USP53-208ENST00000514305 IGFBPL1Q8WX77 278 aa17.41■□□□□ 0.38
USP53-208ENST00000514305 CNBD2Q96M20 576 aa17.41■□□□□ 0.38
USP53-208ENST00000514305 DDX28Q9NUL7 540 aaKnown RBP17.41■□□□□ 0.38
USP53-208ENST00000514305 BLOC1S6Q9UL45 172 aa17.41■□□□□ 0.38
USP53-208ENST00000514305 TPRKBQ9Y3C4 175 aa17.41■□□□□ 0.38
USP53-208ENST00000514305 ATP23Q9Y6H3 246 aa17.41■□□□□ 0.38
USP53-208ENST00000514305 DAPL1A0PJW8 107 aa17.4■□□□□ 0.38
USP53-208ENST00000514305 DENRO43583 198 aaKnown RBP17.4■□□□□ 0.38
USP53-208ENST00000514305 WBP4O75554 376 aaKnown RBP17.4■□□□□ 0.38
USP53-208ENST00000514305 CELA3BP08861 270 aa17.4■□□□□ 0.38
USP53-208ENST00000514305 TACSTD2P09758 323 aa17.4■□□□□ 0.38
USP53-208ENST00000514305 ZNF35P13682 527 aa17.4■□□□□ 0.38
USP53-208ENST00000514305 DCKP27707 260 aa17.4■□□□□ 0.38
USP53-208ENST00000514305 RPS27P42677 84 aaKnown RBP17.4■□□□□ 0.38
USP53-208ENST00000514305 ATP5J2P56134 94 aa17.4■□□□□ 0.38
USP53-208ENST00000514305 SELENOVP59797 346 aa17.4■□□□□ 0.38
USP53-208ENST00000514305 ADAM5Q6NVV9 412 aa17.4■□□□□ 0.38
USP53-208ENST00000514305 PLEKHG7Q6ZR37 379 aa17.4■□□□□ 0.38
USP53-208ENST00000514305 KCTD20Q7Z5Y7 419 aa17.4■□□□□ 0.38
USP53-208ENST00000514305 NUP37Q8NFH4 326 aa17.4■□□□□ 0.38
USP53-208ENST00000514305 SNX33Q8WV41 574 aa17.4■□□□□ 0.38
USP53-208ENST00000514305 FBXW5Q969U6 566 aa17.4■□□□□ 0.38
USP53-208ENST00000514305 MAP6Q96JE9 813 aa17.4■□□□□ 0.38
USP53-208ENST00000514305 C4orf45Q96LM5 186 aa17.4■□□□□ 0.38
USP53-208ENST00000514305 KCNJ15Q99712 375 aa17.4■□□□□ 0.38
USP53-208ENST00000514305 ZNF701Q9NV72 531 aaPredicted RBP17.4■□□□□ 0.38
USP53-208ENST00000514305 FAIMQ9NVQ4 179 aa17.4■□□□□ 0.38
USP53-208ENST00000514305 TBCCD1Q9NVR7 557 aa17.4■□□□□ 0.38
USP53-208ENST00000514305 CNOT2Q9NZN8 540 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms