RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 REEP4Q9H6H4 257 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 RRAGDQ9NQL2 400 aaPredicted RBP2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 POLE3Q9NRF9 147 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 TUBG2Q9NRH3 451 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 TNFRSF19Q9NS68 423 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 ZCCHC3Q9NUD5 404 aaKnown RBP2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 EXD2Q9NVH0 621 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 MIOXQ9UGB7 285 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 RPUSD1Q9UJJ7 312 aaKnown RBP2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 OSGIN1Q9UJX0 560 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 HSF4Q9ULV5 492 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 TMED7Q9Y3B3 224 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 PCDHGB5Q9Y5G0 923 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 CACNG2Q9Y698 323 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 NUP214P35658 2090 aaPredicted RBP2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 IGHV3OR16-10A0A075B7F0 116 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 A0A087X0M5 115 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 A0A1B0GX30 115 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 A0A1W2PPH5 198 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 WI2-2373I1.2A0A1W2PRP0 233 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 BTBD17A6NE02 478 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 PGPEP1LA6NFU8 196 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 ANKRD61A6NGH8 418 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 ZNF879B4DU55 563 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 H3BSA7 217 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 PGRMC1O00264 195 aaKnown RBP2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 SURF4O15260 269 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 ANGPTL7O43827 346 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 OR2T1O43869 369 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 FCMRO60667 390 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 SUPT7LO94864 414 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 SEC31AO94979 1220 aaKnown RBP2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 MFN2O95140 757 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 LHBP01229 141 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 IGHV1-46P01743 117 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 IGHV4-59P01825 116 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 OR8G3PP0DMU2 310 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 UROSP10746 265 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 CD79AP11912 226 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 CCNA2P20248 432 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 IMPDH1P20839 514 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 GABRA5P31644 462 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 RYKP34925 604 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 RPL3P39023 403 aaKnown RBP2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 PAFAH1B1P43034 410 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 NPY4RP50391 375 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 EFNB2P52799 333 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 CLDN17P56750 224 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 SEC61A1P61619 476 aaKnown RBP2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 BTG1P62324 171 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 GNB2P62879 340 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 KCNJ10P78508 379 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 RBBP4Q09028 425 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 PMS2P3Q13401 168 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 KIAA0040Q15053 153 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 OR7A5Q15622 319 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 NDUFAF6Q330K2 333 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 ZNF774Q6NX45 483 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 EMBQ6PCB8 327 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 GPRIN3Q6ZVF9 776 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 SZRD1Q7Z422 152 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 NET1Q7Z628 596 aaPredicted RBP2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 ZER1Q7Z7L7 766 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 NDUFA11Q86Y39 141 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 ARMC8Q8IUR7 673 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 TMEM139Q8IV31 216 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 CTAGE3PQ8IX95 158 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 C20orf196Q8IYI0 205 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 ARFGAP2Q8N6H7 521 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 OR2T6Q8NHC8 308 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 MFSD8Q8NHS3 518 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 NFKBIDQ8NI38 313 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 TMEM163Q8TC26 289 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 C10orf82Q8WW14 230 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 OR5P2Q8WZ92 322 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 EME1Q96AY2 570 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 PPCDCQ96CD2 204 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 APOPT1Q96IL0 206 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 EGLN2Q96KS0 407 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 C7orf26Q96N11 449 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 OXGR1Q96P68 337 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 NUDT16L1Q9BRJ7 211 aaKnown RBP2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 EBPLQ9BY08 206 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 RANBP3Q9H6Z4 567 aaPredicted RBP2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 AAMDCQ9H7C9 122 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 B3GAT2Q9NPZ5 323 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 TCF7L2Q9NQB0 619 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 TMEM106BQ9NUM4 274 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 SLC25A10Q9UBX3 287 aaPredicted RBP2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 AASSQ9UDR5 926 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 IL19Q9UHD0 177 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 VPREB3Q9UKI3 123 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 POFUT2Q9Y2G5 429 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 FAM96BQ9Y3D0 163 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 RAP2CQ9Y3L5 183 aa2.98□□□□□ -1.93
PDLIM5-218ENST00000513341 IGHV1-69DA0A0B4J2H0 117 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 IQCMA0A1B0GVH7 501 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 TMEM72A0PK05 275 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 CEACAM18A8MTB9 384 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 TMEM178BH3BS89 294 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms