RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 BABAM2Q9NXR7 383 aa10.87□□□□□ -0.67
PDPN-210ENST00000513143 KLF2Q9Y5W3 355 aaPredicted RBP10.87□□□□□ -0.67
PDPN-210ENST00000513143 ANKHD1Q8IWZ3 2542 aaKnown RBP10.86□□□□□ -0.67
PDPN-210ENST00000513143 C5orf49A4QMS7 147 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 F5H5K5 113 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 M0R135 149 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 RPP14O95059 124 aaKnown RBP10.86□□□□□ -0.67
PDPN-210ENST00000513143 APOC1P02654 83 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 LCKP06239 509 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 ACSM4P0C7M7 580 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 CECR9P0C854 216 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 ATP6V1B1P15313 513 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 IGFBP2P18065 325 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 MMP16P51512 607 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 PRKXP51817 358 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 GBX2P52951 348 aaPredicted RBP10.86□□□□□ -0.67
PDPN-210ENST00000513143 TPTEP56180 551 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 PSMA6P60900 246 aaKnown RBP10.86□□□□□ -0.67
PDPN-210ENST00000513143 ACSM1Q08AH1 577 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 DOC2BQ14184 412 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 MED22Q15528 200 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 TBC1D28Q2M2D7 210 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 UBE2UQ5VVX9 321 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 XAF1Q6GPH4 301 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 FDX2Q6P4F2 183 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 DRAM2Q6UX65 266 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 KCTD8Q6ZWB6 473 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 ZNF367Q7RTV3 350 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 PRSS45Q7RTY3 260 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 WFDC8Q8IUA0 241 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 IL17RDQ8NFM7 739 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 OR1J2Q8NGS2 313 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 LINC01560Q8TB33 94 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 FCGR1BQ92637 280 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 RORBQ92753 470 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 ZNF799Q96GE5 643 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 ZC3HAV1LQ96H79 300 aaKnown RBP10.86□□□□□ -0.67
PDPN-210ENST00000513143 DACH2Q96NX9 599 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 DCLRE1CQ96SD1 692 aaKnown RBP10.86□□□□□ -0.67
PDPN-210ENST00000513143 MRPS26Q9BYN8 205 aaKnown RBP10.86□□□□□ -0.67
PDPN-210ENST00000513143 CADP27708 2225 aa10.86□□□□□ -0.67
PDPN-210ENST00000513143 TMEM269A0A1B0GVZ9 245 aa10.85□□□□□ -0.67
PDPN-210ENST00000513143 E9PI62 339 aa10.85□□□□□ -0.67
PDPN-210ENST00000513143 C19orf84I3L1E1 186 aa10.85□□□□□ -0.67
PDPN-210ENST00000513143 M0R1B8 84 aa10.85□□□□□ -0.67
PDPN-210ENST00000513143 PNPP00491 289 aa10.85□□□□□ -0.67
PDPN-210ENST00000513143 LALBAP00709 142 aa10.85□□□□□ -0.67
PDPN-210ENST00000513143 EPXP11678 715 aa10.85□□□□□ -0.67
PDPN-210ENST00000513143 CCL2P13500 99 aa10.85□□□□□ -0.67
PDPN-210ENST00000513143 ZNF35P13682 527 aa10.85□□□□□ -0.67
PDPN-210ENST00000513143 JUNBP17275 347 aaPredicted RBP10.85□□□□□ -0.67
PDPN-210ENST00000513143 PSMB10P40306 273 aa10.85□□□□□ -0.67
PDPN-210ENST00000513143 TGM4P49221 684 aa10.85□□□□□ -0.67
PDPN-210ENST00000513143 CX3CR1P49238 355 aa10.85□□□□□ -0.67
PDPN-210ENST00000513143 BDH1Q02338 343 aa10.85□□□□□ -0.67
PDPN-210ENST00000513143 HGFACQ04756 655 aa10.85□□□□□ -0.67
PDPN-210ENST00000513143 ZNF829Q3KNS6 432 aaPredicted RBP10.85□□□□□ -0.67
PDPN-210ENST00000513143 ALKBH2Q6NS38 261 aa10.85□□□□□ -0.67
PDPN-210ENST00000513143 COLCA1Q6ZS62 124 aa10.85□□□□□ -0.67
PDPN-210ENST00000513143 NAA40Q86UY6 237 aa10.85□□□□□ -0.67
PDPN-210ENST00000513143 KLBQ86Z14 1044 aa10.85□□□□□ -0.67
PDPN-210ENST00000513143 PAQR4Q8N4S7 273 aaPredicted RBP10.85□□□□□ -0.67
PDPN-210ENST00000513143 ZNF283Q8N7M2 679 aa10.85□□□□□ -0.67
PDPN-210ENST00000513143 ACBD4Q8NC06 268 aa10.85□□□□□ -0.67
PDPN-210ENST00000513143 DOK1Q99704 481 aa10.85□□□□□ -0.67
PDPN-210ENST00000513143 NGBQ9NPG2 151 aa10.85□□□□□ -0.67
PDPN-210ENST00000513143 ISYNA1Q9NPH2 558 aa10.85□□□□□ -0.67
PDPN-210ENST00000513143 TRIM36Q9NQ86 728 aa10.85□□□□□ -0.67
PDPN-210ENST00000513143 FAM206AQ9NX38 181 aa10.85□□□□□ -0.67
PDPN-210ENST00000513143 R4GMQ9 66 aa10.85□□□□□ -0.67
PDPN-210ENST00000513143 IGHV2OR16-5A0A0B4J2B6 119 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 ACOD1A6NK06 481 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 OGG1O15527 345 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 ICMTO60725 284 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 CLPTM1O96005 669 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 CCNOP22674 350 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 CD40P25942 277 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 GTF2A1P52655 376 aaPredicted RBP10.84□□□□□ -0.67
PDPN-210ENST00000513143 ZNF121P58317 390 aaPredicted RBP10.84□□□□□ -0.67
PDPN-210ENST00000513143 TAS2R43P59537 309 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 NAAAQ02083 359 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 MFGE8Q08431 387 aaPredicted RBP10.84□□□□□ -0.67
PDPN-210ENST00000513143 CCDC58Q4VC31 144 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 RPL22L1Q6P5R6 122 aaKnown RBP10.84□□□□□ -0.67
PDPN-210ENST00000513143 TMEM108Q6UXF1 575 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 DMRTC2Q8IXT2 367 aaPredicted RBP10.84□□□□□ -0.67
PDPN-210ENST00000513143 OR2G2Q8NGZ5 317 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 RPS4Y2Q8TD47 263 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 COG8Q96MW5 612 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 MGLLQ99685 303 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 C1QTNF5Q9BXJ0 243 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 CDH20Q9HBT6 801 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 VCX3AQ9NNX9 186 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 G6PC2Q9NQR9 355 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 ST6GALNAC2Q9UJ37 374 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 GRIP1Q9Y3R0 1128 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 SIRT4Q9Y6E7 314 aaPredicted RBP10.84□□□□□ -0.67
PDPN-210ENST00000513143 DPRXA6NFQ7 191 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 LOC110117498-PIK3R3F6TDL0 507 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 INMTO95050 263 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms