RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 ATOH1Q92858 354 aaPredicted RBP11.32□□□□□ -0.6
COL11A1-210ENST00000512756 TSLPQ969D9 159 aa11.32□□□□□ -0.6
COL11A1-210ENST00000512756 THOC3Q96J01 351 aaKnown RBP11.32□□□□□ -0.6
COL11A1-210ENST00000512756 ANKRD10Q9NXR5 420 aa11.32□□□□□ -0.6
COL11A1-210ENST00000512756 RPH3ALQ9UNE2 315 aa11.32□□□□□ -0.6
COL11A1-210ENST00000512756 PPIL1Q9Y3C6 166 aa11.32□□□□□ -0.6
COL11A1-210ENST00000512756 IGLV3-16A0A075B6K0 115 aa11.32□□□□□ -0.6
COL11A1-210ENST00000512756 A0A1W2PPC4 97 aa11.32□□□□□ -0.6
COL11A1-210ENST00000512756 NRASP01111 189 aa11.32□□□□□ -0.6
COL11A1-210ENST00000512756 EDN3P14138 238 aa11.32□□□□□ -0.6
COL11A1-210ENST00000512756 EMDP50402 254 aa11.32□□□□□ -0.6
COL11A1-210ENST00000512756 PPP2CBP62714 309 aa11.32□□□□□ -0.6
COL11A1-210ENST00000512756 PPP2CAP67775 309 aa11.32□□□□□ -0.6
COL11A1-210ENST00000512756 FLI1Q01543 452 aaPredicted RBP11.32□□□□□ -0.6
COL11A1-210ENST00000512756 TOMM34Q15785 309 aaPredicted RBP11.32□□□□□ -0.6
COL11A1-210ENST00000512756 AGBL4Q5VU57 503 aa11.32□□□□□ -0.6
COL11A1-210ENST00000512756 LAIR1Q6GTX8 287 aa11.32□□□□□ -0.6
COL11A1-210ENST00000512756 KIRREL2Q6UWL6 708 aa11.32□□□□□ -0.6
COL11A1-210ENST00000512756 BAP18Q8IXM2 172 aa11.32□□□□□ -0.6
COL11A1-210ENST00000512756 GPX8Q8TED1 209 aa11.32□□□□□ -0.6
COL11A1-210ENST00000512756 TMED6Q8WW62 240 aa11.32□□□□□ -0.6
COL11A1-210ENST00000512756 SLX4Q8IY92 1834 aa11.32□□□□□ -0.6
COL11A1-210ENST00000512756 CROCCQ5TZA2 2017 aa11.32□□□□□ -0.6
COL11A1-210ENST00000512756 RPL12P30050 165 aaKnown RBP11.31□□□□□ -0.6
COL11A1-210ENST00000512756 AGERQ15109 404 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 ADAM5Q6NVV9 412 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 LYG2Q86SG7 212 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 YRDCQ86U90 279 aaKnown RBP11.31□□□□□ -0.6
COL11A1-210ENST00000512756 ANKRD53Q8N9V6 530 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 DTWD2Q8NBA8 298 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 AK3Q9UIJ7 227 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 B9D1Q9UPM9 204 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 MYO5AQ9Y4I1 1855 aaKnown RBP11.31□□□□□ -0.6
COL11A1-210ENST00000512756 ARID1BQ8NFD5 2236 aaPredicted RBP11.31□□□□□ -0.6
COL11A1-210ENST00000512756 ASPDHA6ND91 283 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 SH2D1BO14796 132 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 MAGEB4O15481 346 aaPredicted RBP11.31□□□□□ -0.6
COL11A1-210ENST00000512756 TGOLN2O43493 480 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 FABP1P07148 127 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 SUB1P53999 127 aaKnown RBP eCLIP11.31□□□□□ -0.6
COL11A1-210ENST00000512756 FZD2Q14332 565 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 ZNF626Q68DY1 528 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 TMEM182Q6ZP80 229 aaPredicted RBP11.31□□□□□ -0.6
COL11A1-210ENST00000512756 ZNF573Q86YE8 665 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 SKA3Q8IX90 412 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 CISD2Q8N5K1 135 aaKnown RBP11.31□□□□□ -0.6
COL11A1-210ENST00000512756 BHLHE23Q8NDY6 225 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 CCL4L1Q8NHW4 92 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 C2orf50Q96LR7 162 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 RHNO1Q9BSD3 238 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 PHF7Q9BWX1 381 aaPredicted RBP11.31□□□□□ -0.6
COL11A1-210ENST00000512756 FAM234AQ9H0X4 552 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 RIMS4Q9H426 269 aaPredicted RBP11.31□□□□□ -0.6
COL11A1-210ENST00000512756 C12orf49Q9H741 205 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 LANCL2Q9NS86 450 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 POMT2Q9UKY4 750 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 SLC22A13Q9Y226 551 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 HDGFL3Q9Y3E1 203 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 A0A1W2PNR3 127 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 HS3ST1O14792 307 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 F10P00742 488 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 APOA2P02652 100 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 EXOSC2Q13868 293 aaKnown RBP11.31□□□□□ -0.6
COL11A1-210ENST00000512756 EDDM3AQ14507 147 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 OR8G1Q15617 311 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 Q6ZRG5 221 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 NLRC3Q7RTR2 1065 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 ZADH2Q8N4Q0 377 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 NUDCD2Q8WVJ2 157 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 ST8SIA4Q92187 359 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 BSCL2Q96G97 398 aaPredicted RBP11.31□□□□□ -0.6
COL11A1-210ENST00000512756 PTDSS2Q9BVG9 487 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 OCEL1Q9H607 264 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 CYSLTR2Q9NS75 346 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 FLVCR2Q9UPI3 526 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 FOXJ3Q9UPW0 622 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 ATP6V1G2-DDX39BF2Z307 99 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 NRG2O14511 850 aaPredicted RBP11.31□□□□□ -0.6
COL11A1-210ENST00000512756 NPBWR1P48145 328 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 PNLIPRP3Q17RR3 467 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 TMPRSS11FQ6ZWK6 438 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 CMTM2Q8TAZ6 248 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 C10orf90Q96M02 699 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 SLIRPQ9GZT3 109 aaKnown RBP11.31□□□□□ -0.6
COL11A1-210ENST00000512756 EGLN1Q9GZT9 426 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 SHARPINQ9H0F6 387 aa11.31□□□□□ -0.6
COL11A1-210ENST00000512756 K7EQM0 130 aa11.3□□□□□ -0.6
COL11A1-210ENST00000512756 EFSO43281 561 aa11.3□□□□□ -0.6
COL11A1-210ENST00000512756 IL5P05113 134 aa11.3□□□□□ -0.6
COL11A1-210ENST00000512756 PRAMEF5Q5TYX0 476 aa11.3□□□□□ -0.6
COL11A1-210ENST00000512756 PRAMEF6Q5VXH4 476 aa11.3□□□□□ -0.6
COL11A1-210ENST00000512756 CORO2AQ92828 525 aa11.3□□□□□ -0.6
COL11A1-210ENST00000512756 SPNS1Q9H2V7 528 aa11.3□□□□□ -0.6
COL11A1-210ENST00000512756 SLCO1C1Q9NYB5 712 aa11.3□□□□□ -0.6
COL11A1-210ENST00000512756 KLF13Q9Y2Y9 288 aaPredicted RBP11.3□□□□□ -0.6
COL11A1-210ENST00000512756 MICAL3Q7RTP6 2002 aa11.3□□□□□ -0.6
COL11A1-210ENST00000512756 PPP5D1E7EU14 171 aa11.3□□□□□ -0.6
COL11A1-210ENST00000512756 SLC17A2O00624 439 aa11.3□□□□□ -0.6
COL11A1-210ENST00000512756 ITGBL1O95965 494 aaPredicted RBP11.3□□□□□ -0.6
COL11A1-210ENST00000512756 RPA2P15927 270 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms