RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 ZBED5Q49AG3 693 aa6.05□□□□□ -1.44
USP46-208ENST00000512656 IFI44LQ53G44 452 aa6.05□□□□□ -1.44
USP46-208ENST00000512656 ESCO2Q56NI9 601 aa6.05□□□□□ -1.44
USP46-208ENST00000512656 GPR139Q6DWJ6 353 aa6.05□□□□□ -1.44
USP46-208ENST00000512656 TMPRSS11FQ6ZWK6 438 aa6.05□□□□□ -1.44
USP46-208ENST00000512656 MBOAT2Q6ZWT7 520 aa6.05□□□□□ -1.44
USP46-208ENST00000512656 FKBP9P1Q75LS8 142 aa6.05□□□□□ -1.44
USP46-208ENST00000512656 ZNF771Q7L3S4 317 aaPredicted RBP6.05□□□□□ -1.44
USP46-208ENST00000512656 DOK3Q7L591 496 aa6.05□□□□□ -1.44
USP46-208ENST00000512656 IGFN1Q86VF2 1251 aa6.05□□□□□ -1.44
USP46-208ENST00000512656 LRRC28Q86X40 367 aaPredicted RBP6.05□□□□□ -1.44
USP46-208ENST00000512656 Q8N1Y9 231 aa6.05□□□□□ -1.44
USP46-208ENST00000512656 ZNF283Q8N7M2 679 aa6.05□□□□□ -1.44
USP46-208ENST00000512656 CLDN22Q8N7P3 220 aa6.05□□□□□ -1.44
USP46-208ENST00000512656 LRRC75AQ8NAA5 344 aa6.05□□□□□ -1.44
USP46-208ENST00000512656 OR2Z1Q8NG97 314 aa6.05□□□□□ -1.44
USP46-208ENST00000512656 HAVCR1Q96D42 359 aa6.05□□□□□ -1.44
USP46-208ENST00000512656 CMBLQ96DG6 245 aa6.05□□□□□ -1.44
USP46-208ENST00000512656 ZNF570Q96NI8 536 aa6.05□□□□□ -1.44
USP46-208ENST00000512656 MRI1Q9BV20 369 aa6.05□□□□□ -1.44
USP46-208ENST00000512656 ANKRD19PQ9H560 264 aa6.05□□□□□ -1.44
USP46-208ENST00000512656 PATZ1Q9HBE1 687 aaKnown RBP6.05□□□□□ -1.44
USP46-208ENST00000512656 EMC7Q9NPA0 242 aa6.05□□□□□ -1.44
USP46-208ENST00000512656 KRCC1Q9NPI7 259 aaPredicted RBP6.05□□□□□ -1.44
USP46-208ENST00000512656 SAR1AQ9NR31 198 aa6.05□□□□□ -1.44
USP46-208ENST00000512656 PLEK2Q9NYT0 353 aa6.05□□□□□ -1.44
USP46-208ENST00000512656 OR5V1Q9UGF6 321 aa6.05□□□□□ -1.44
USP46-208ENST00000512656 OPN4Q9UHM6 478 aa6.05□□□□□ -1.44
USP46-208ENST00000512656 ATPIF1Q9UII2 106 aa6.05□□□□□ -1.44
USP46-208ENST00000512656 NUP50Q9UKX7 468 aa6.05□□□□□ -1.44
USP46-208ENST00000512656 MYRFQ9Y2G1 1151 aa6.05□□□□□ -1.44
USP46-208ENST00000512656 AUP1Q9Y679 476 aa6.05□□□□□ -1.44
USP46-208ENST00000512656 NOTCH1P46531 2555 aa6.05□□□□□ -1.44
USP46-208ENST00000512656 DYSFO75923 2080 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 A0A087WUU8 490 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 TEX13CA0A0J9YWL9 993 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 OR6C6A6NF89 314 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 LRRC30A6NM36 301 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 A8MXK9 166 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 H7C1C5 153 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 CXCR6O00574 342 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 KHDRBS3O75525 346 aaKnown RBP6.04□□□□□ -1.44
USP46-208ENST00000512656 NDUFB2O95178 105 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 HKR1P10072 659 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 ZNF12P17014 697 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 PRTN3P24158 256 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 ZFP36P26651 326 aaKnown RBP6.04□□□□□ -1.44
USP46-208ENST00000512656 YAP1P46937 504 aaKnown RBP6.04□□□□□ -1.44
USP46-208ENST00000512656 SLC6A9P48067 706 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 LSM6P62312 80 aaKnown RBP6.04□□□□□ -1.44
USP46-208ENST00000512656 LCN6P62502 163 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 ZNF154Q13106 437 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 FHL1Q13642 323 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 ZMYND11Q15326 602 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 AWAT1Q58HT5 328 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 TMEM255AQ5JRV8 349 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 C1orf94Q6P1W5 598 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 PGM2L1Q6PCE3 622 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 ADCK1Q86TW2 530 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 GLB1L2Q8IW92 636 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 SIGLECL1Q8N7X8 197 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 ZDHHC22Q8N966 263 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 DEFB108BQ8NET1 73 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 OR13C2Q8NGS9 318 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 OR13G1Q8NGZ3 307 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 OR1F12Q8NHA8 337 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 RP9Q8TA86 221 aaKnown RBP6.04□□□□□ -1.44
USP46-208ENST00000512656 ITLN1Q8WWA0 313 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 C22orf15Q8WYQ4 148 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 DVL3Q92997 716 aaPredicted RBP6.04□□□□□ -1.44
USP46-208ENST00000512656 SLC25A28Q96A46 364 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 RASD2Q96D21 266 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 PLEKHA8Q96JA3 519 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 Q96M85 177 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 HOPXQ9BPY8 73 aaPredicted RBP6.04□□□□□ -1.44
USP46-208ENST00000512656 ZNF747Q9BV97 191 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 ESM1Q9NQ30 184 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 RHCGQ9UBD6 479 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 MIOXQ9UGB7 285 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 IL20RAQ9UHF4 553 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 LRCH1Q9Y2L9 728 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 POLR1DQ9Y2S0 133 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 STARD10Q9Y365 291 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 FAM32AQ9Y421 112 aaKnown RBP6.04□□□□□ -1.44
USP46-208ENST00000512656 PPIAL4AQ9Y536 164 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 INSIG2Q9Y5U4 225 aa6.04□□□□□ -1.44
USP46-208ENST00000512656 F5H0A9 414 aaPredicted RBP6.03□□□□□ -1.44
USP46-208ENST00000512656 TRAPPC2LH3BP13 241 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 TMEM178BH3BS89 294 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 J3KTA2 159 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 FFAR1O14842 300 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 SLC16A7O60669 478 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 GMNNO75496 209 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 PPIAL4GP0DN37 164 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 CTLA4P16410 223 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 SELEP16581 610 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 EGR1P18146 543 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 CRABP1P29762 137 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 SDHAP31040 664 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 GPR4P46093 362 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms