RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 LSM11P83369 360 aaKnown RBP eCLIP8.12□□□□□ -1.11
VCAN-208ENST00000512590 KLRB1Q12918 225 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 BTN1A1Q13410 526 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.12□□□□□ -1.11
VCAN-208ENST00000512590 SPANXN5Q5MJ07 72 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 SLC37A2Q8TED4 501 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 SEMA4GQ9NTN9 838 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 PITPNC1Q9UKF7 332 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 TMED3Q9Y3Q3 217 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 NUPL2O15504 423 aaKnown RBP8.12□□□□□ -1.11
VCAN-208ENST00000512590 ZGLP1P0C6A0 271 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 DRD5P21918 477 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 ETV6P41212 452 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 ZXDBP98169 803 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 ZNF90Q03938 601 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 ZNF404Q494X3 552 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 HIST2H3AQ71DI3 136 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 TMEM116Q8NCL8 245 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 DLC1Q96QB1 1528 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 METRNQ9UJH8 293 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 CICQ96RK0 1608 aaPredicted RBP8.12□□□□□ -1.11
VCAN-208ENST00000512590 TMEM30CPA0ZSE6 113 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 TRIM77I1YAP6 450 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 CD1DP15813 335 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 PBX1P40424 430 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 CDK5Q00535 292 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 OLIG2Q13516 323 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 CST9Q5W186 159 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 CDCA2Q69YH5 1023 aaPredicted RBP8.12□□□□□ -1.11
VCAN-208ENST00000512590 DCXRQ7Z4W1 244 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 PRSS3P2Q8NHM4 247 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 CTDSP1Q9GZU7 261 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 MAGT1Q9H0U3 335 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 ZBP1Q9H171 429 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 CLMPQ9H6B4 373 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 NOX4Q9NPH5 578 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 TREM2Q9NZC2 230 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 IL36GQ9NZH8 169 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 STRAPQ9Y3F4 350 aaKnown RBP8.12□□□□□ -1.11
VCAN-208ENST00000512590 TMEM212A6NML5 194 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 C16orf97H3BN30 126 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 BMPR1BO00238 502 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 HRASP01112 189 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 HLA-AP01891 365 aaKnown RBP8.12□□□□□ -1.11
VCAN-208ENST00000512590 OPN1MWP04001 364 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 OPN1MW2P0DN77 364 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 OPN1MW3P0DN78 364 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 PCSK6P29122 969 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 MGAT3Q09327 533 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 ZNF266Q14584 549 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 SPHARQ15513 63 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 ZNF239Q16600 458 aaKnown RBP8.12□□□□□ -1.11
VCAN-208ENST00000512590 PCK2Q16822 640 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 FCRL6Q6DN72 434 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 OR4X2Q8NGF9 303 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 NEIL2Q969S2 332 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 RAB40ALP0C0E4 278 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 UBBP0CG47 229 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 HIST1H1EP10412 219 aaKnown RBP8.11□□□□□ -1.11
VCAN-208ENST00000512590 GPR3P46089 330 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 HAAOP46952 286 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 GIPRP48546 466 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 PAX5Q02548 391 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 DUSP8Q13202 625 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 LGALSLQ3ZCW2 172 aaPredicted RBP8.11□□□□□ -1.11
VCAN-208ENST00000512590 TM4SF20Q53R12 229 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 ELFN2Q5R3F8 820 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 C6orf136Q5SQH8 315 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 OR4C3Q8NH37 302 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 CANT1Q8WVQ1 401 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 CHRNA10Q9GZZ6 450 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 LAMP3Q9UQV4 416 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 C3orf80F5H4A9 247 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 TMPRSS2O15393 492 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 GSTZ1O43708 216 aaPredicted RBP8.11□□□□□ -1.11
VCAN-208ENST00000512590 SLC35E2P0CK97 266 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 HTR2CP28335 458 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 SPATS1Q496A3 300 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 LRRC55Q6ZSA7 311 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 LYSMD2Q8IV50 215 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 LGI3Q8N145 548 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 B3GNT7Q8NFL0 401 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 CMASQ8NFW8 434 aaPredicted RBP8.11□□□□□ -1.11
VCAN-208ENST00000512590 SLC26A10Q8NG04 563 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 LRRC15Q8TF66 581 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 BLNKQ8WV28 456 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 CIB3Q96Q77 187 aaPredicted RBP8.11□□□□□ -1.11
VCAN-208ENST00000512590 DDOQ99489 341 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 SH3BGRL3Q9H299 93 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 TMPRSS5Q9H3S3 457 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 BABAM2Q9NXR7 383 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 ABCA6Q8N139 1617 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 OSMP13725 252 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 ZBTB25P24278 435 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 ERVFC1-1P60608 527 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 NUTF2P61970 127 aaKnown RBP8.11□□□□□ -1.11
VCAN-208ENST00000512590 H3F3AP84243 136 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 PRSS8Q16651 343 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 FNDC7Q5VTL7 733 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 OR5M8Q8NGP6 311 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms