RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 FAM183BPQ6ZVS7 135 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 RUFY3Q7L099 469 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 P4HA3Q7Z4N8 544 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 MISPQ8IVT2 679 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 UMODL1-AS1Q8N2C9 162 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 BBS5Q8N3I7 341 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 OR52M1Q8NGK5 317 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 OR52J3Q8NH60 311 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 RHOXF1Q8NHV9 184 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 GIPC3Q8TF64 312 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 FCGR1BQ92637 280 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 NT5C3BQ969T7 300 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 C9orf85Q96MD7 179 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 JSRP1Q96MG2 331 aaPredicted RBP2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 CSPG4P5Q96PW8 444 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 VPS35Q96QK1 796 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 LYSMD1Q96S90 227 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 NRTNQ99748 197 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 CCDC77Q9BR77 488 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 ZNF416Q9BWM5 594 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 UGT2B28Q9BY64 529 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 DRC3Q9H069 523 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 NCOR1P1Q9H4R4 102 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 RMND5AQ9H871 391 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 ROPN1Q9HAT0 212 aaPredicted RBP2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 RAB20Q9NX57 234 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 IMPAD1Q9NX62 359 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 SENP1Q9P0U3 644 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 CLCF1Q9UBD9 225 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 RSPH14Q9UHP6 348 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 CRLS1Q9UJA2 301 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 FZR1Q9UM11 496 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 DHRS7Q9Y394 339 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 WNK2Q9Y3S1 2297 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 MFSD2BA6NFX1 497 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 SAP18O00422 153 aaKnown RBP2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 PDXKO00764 312 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 ABCD4O14678 606 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 IMPA2O14732 288 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 CASQ2O14958 399 aaPredicted RBP2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 EMC8O43402 210 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 ANGPTL7O43827 346 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 PFKFB2O60825 505 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 RAMP1O60894 148 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 TRAPPC6AO75865 159 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 LY6G6CO95867 125 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 ACTL6AO96019 429 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 THY1P04216 161 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 WNT2P09544 360 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 DNAH10OSP0CZ25 163 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 CALCBP10092 127 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 CCL3P10147 92 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 CPN1P15169 458 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 FUT1P19526 365 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 CCNCP24863 283 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 XCR1P46094 333 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 POU3F4P49335 361 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 FABP6P51161 128 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 SPIBQ01892 262 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 DOC2AQ14183 400 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 TRIP10Q15642 601 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 SLC22A6Q4U2R8 563 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 BOLA3Q53S33 107 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 TMEM41BQ5BJD5 291 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 ATAD3CQ5T2N8 411 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 FRMPD2BQ6IN97 320 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 TMEM220Q6QAJ8 160 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 PRSS48Q7RTY5 328 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 NET1Q7Z628 596 aaPredicted RBP2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 TSEN54Q7Z6J9 526 aaKnown RBP2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 ARFGAP2Q8N6H7 521 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 STEAP2Q8NFT2 490 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 OR56B2PQ8NGI1 322 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 ZNF671Q8TAW3 534 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 FNDC8Q8TC99 324 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 MCOLN3Q8TDD5 553 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 SELENOMQ8WWX9 145 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 SLC25A36Q96CQ1 311 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 DNAJA3Q96EY1 480 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 ZNF414Q96IQ9 312 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 C8orf76Q96K31 380 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 SMIM14Q96QK8 99 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 LRRC19Q9H756 370 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 FAM114A2Q9NRY5 505 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 NMRK1Q9NWW6 199 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 STOX2Q9P2F5 926 aaPredicted RBP2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 SLC17A7Q9P2U7 560 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 NUP50Q9UKX7 468 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 CHMP2BQ9UQN3 213 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 CAB39Q9Y376 341 aaPredicted RBP2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 NAALAD2Q9Y3Q0 740 aa2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 TET2Q6N021 2002 aaPredicted RBP2.61□□□□□ -1.99
TOPBP1-208ENST00000511439 PKHD1P08F94 4074 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 SLC22A20A6NK97 555 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 ANKRD30BLA7E2S9 258 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 C11orf98E9PRG8 122 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 TBX19O60806 448 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 VPS26AO75436 327 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 RHBDL1O75783 438 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 HPNP05981 417 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms