RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 UVRAGQ9P2Y5 699 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 STK38LQ9Y2H1 464 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 CACNG2Q9Y698 323 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 PINLYPA6NC86 204 aa3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 PDZK1P1A8MUH7 402 aa3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 PSMD11O00231 422 aa3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 GABRPO00591 440 aa3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 RP2O75695 350 aa3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 CATP04040 527 aaKnown RBP3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 PCCAP05165 728 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 FABP3P05413 133 aa3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 CTSLP07711 333 aa3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 RAB3AP20336 220 aa3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 XIAPP98170 497 aa3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 SLAQ13239 276 aa3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 ART3Q13508 389 aa3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 TFDP2Q14188 446 aa3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 RCAN2Q14206 197 aa3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 GCSAMLQ5JQS6 135 aa3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 HES5Q5TA89 166 aa3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 ARHGAP18Q8N392 663 aa3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 ARRDC1Q8N5I2 433 aa3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 DUSP18Q8NEJ0 188 aa3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 TCP10LQ8TDR4 215 aa3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 RGP1Q92546 391 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 FAM131CQ96AQ9 280 aa3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 ZBED3Q96IU2 234 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 NAA50Q9GZZ1 169 aaKnown RBP3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 FAM49BQ9NUQ9 324 aa3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 RPS6KB2Q9UBS0 482 aa3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 ZMAT5Q9UDW3 170 aaKnown RBP3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 PRG3Q9Y2Y8 225 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 MTCL1Q9Y4B5 1905 aaKnown RBP3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 MN1Q10571 1320 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P47-201ENST00000511281 AQRO60306 1485 aaKnown RBP eCLIP3.6□□□□□ -1.83
HMGB1P47-201ENST00000511281 TDRD6O60522 2096 aaKnown RBP3.6□□□□□ -1.83
HMGB1P47-201ENST00000511281 WI2-2373I1.2A0A1W2PRP0 233 aa3.6□□□□□ -1.83
HMGB1P47-201ENST00000511281 CIB4A0PJX0 185 aa3.6□□□□□ -1.83
HMGB1P47-201ENST00000511281 H7C417 338 aa3.6□□□□□ -1.83
HMGB1P47-201ENST00000511281 SLC19A2O60779 497 aa3.6□□□□□ -1.83
HMGB1P47-201ENST00000511281 GLAP06280 429 aa3.6□□□□□ -1.83
HMGB1P47-201ENST00000511281 EIF4EP06730 217 aaKnown RBP3.6□□□□□ -1.83
HMGB1P47-201ENST00000511281 CD3GP09693 182 aa3.6□□□□□ -1.83
HMGB1P47-201ENST00000511281 GABRG2P18507 467 aa3.6□□□□□ -1.83
HMGB1P47-201ENST00000511281 IL32P24001 234 aa3.6□□□□□ -1.83
HMGB1P47-201ENST00000511281 OR2B8PP59922 312 aa3.6□□□□□ -1.83
HMGB1P47-201ENST00000511281 RNF175Q8N4F7 328 aa3.6□□□□□ -1.83
HMGB1P47-201ENST00000511281 C15orf56Q8N910 161 aa3.6□□□□□ -1.83
HMGB1P47-201ENST00000511281 ABHD3Q8WU67 409 aa3.6□□□□□ -1.83
HMGB1P47-201ENST00000511281 BAALCQ8WXS3 180 aa3.6□□□□□ -1.83
HMGB1P47-201ENST00000511281 DCPSQ96C86 337 aaKnown RBP3.6□□□□□ -1.83
HMGB1P47-201ENST00000511281 SGTBQ96EQ0 304 aa3.6□□□□□ -1.83
HMGB1P47-201ENST00000511281 ZNF317Q96PQ6 595 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P47-201ENST00000511281 CHID1Q9BWS9 393 aa3.6□□□□□ -1.83
HMGB1P47-201ENST00000511281 ANAPC11Q9NYG5 84 aa3.6□□□□□ -1.83
HMGB1P47-201ENST00000511281 MTFP1Q9UDX5 166 aa3.6□□□□□ -1.83
HMGB1P47-201ENST00000511281 FLVCR2Q9UPI3 526 aa3.6□□□□□ -1.83
HMGB1P47-201ENST00000511281 SBNO1A3KN83 1393 aa3.6□□□□□ -1.83
HMGB1P47-201ENST00000511281 LOC100506127A0A0U1RQW1 187 aa3.59□□□□□ -1.83
HMGB1P47-201ENST00000511281 A6NDX4 124 aa3.59□□□□□ -1.83
HMGB1P47-201ENST00000511281 A8MU10 97 aa3.59□□□□□ -1.83
HMGB1P47-201ENST00000511281 H7C1H1 209 aa3.59□□□□□ -1.83
HMGB1P47-201ENST00000511281 VAPBO95292 243 aa3.59□□□□□ -1.83
HMGB1P47-201ENST00000511281 HLA-DPB1P04440 258 aa3.59□□□□□ -1.83
HMGB1P47-201ENST00000511281 PPICP45877 212 aa3.59□□□□□ -1.83
HMGB1P47-201ENST00000511281 P2RX1P51575 399 aa3.59□□□□□ -1.83
HMGB1P47-201ENST00000511281 SYNJ2BPP57105 145 aa3.59□□□□□ -1.83
HMGB1P47-201ENST00000511281 Q3ZCU0 254 aa3.59□□□□□ -1.83
HMGB1P47-201ENST00000511281 AVPI1Q5T686 147 aa3.59□□□□□ -1.83
HMGB1P47-201ENST00000511281 C12orf54Q6X4T0 127 aa3.59□□□□□ -1.83
HMGB1P47-201ENST00000511281 TMPRSS11AQ6ZMR5 421 aa3.59□□□□□ -1.83
HMGB1P47-201ENST00000511281 PCP2Q8IVA1 136 aa3.59□□□□□ -1.83
HMGB1P47-201ENST00000511281 ST13P4Q8IZP2 240 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P47-201ENST00000511281 FAM86B1Q8N7N1 296 aa3.59□□□□□ -1.83
HMGB1P47-201ENST00000511281 Q8N9W7 124 aa3.59□□□□□ -1.83
HMGB1P47-201ENST00000511281 RNF138Q8WVD3 245 aa3.59□□□□□ -1.83
HMGB1P47-201ENST00000511281 TMEM158Q8WZ71 300 aa3.59□□□□□ -1.83
HMGB1P47-201ENST00000511281 OR8D1Q8WZ84 308 aa3.59□□□□□ -1.83
HMGB1P47-201ENST00000511281 TFGQ92734 400 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P47-201ENST00000511281 RCN3Q96D15 328 aa3.59□□□□□ -1.83
HMGB1P47-201ENST00000511281 MAP1LC3CQ9BXW4 147 aa3.59□□□□□ -1.83
HMGB1P47-201ENST00000511281 ARMC7Q9H6L4 198 aa3.59□□□□□ -1.83
HMGB1P47-201ENST00000511281 MED4Q9NPJ6 270 aa3.59□□□□□ -1.83
HMGB1P47-201ENST00000511281 RBAKQ9NYW8 714 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P47-201ENST00000511281 MAP3K15Q6ZN16 1313 aa3.59□□□□□ -1.83
HMGB1P47-201ENST00000511281 TP53BP1Q12888 1972 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 A0A0B4J2E0 115 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 A0A1B0GVY2 172 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 HACD1B0YJ81 288 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 INS-IGF2F8WCM5 200 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 PAHP00439 452 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 OR8U9P0C7N5 309 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 HOXA9P31269 272 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 CSNK1A1P48729 337 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 HCAR3P49019 387 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 UBE2AP49459 152 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 UBE2NP61088 152 aaKnown RBP3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 ARG2P78540 354 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 CKAP4Q07065 602 aaKnown RBP3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 GINS1Q14691 196 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms