RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 RMND5BQ96G75 393 aaPredicted RBP4.26□□□□□ -1.73
NEK1-204ENST00000509912 PPP3R2Q96LZ3 170 aa4.26□□□□□ -1.73
NEK1-204ENST00000509912 MAPKAP1Q9BPZ7 522 aa4.26□□□□□ -1.73
NEK1-204ENST00000509912 GON7Q9BXV9 100 aa4.26□□□□□ -1.73
NEK1-204ENST00000509912 PIGUQ9H490 435 aa4.26□□□□□ -1.73
NEK1-204ENST00000509912 NARFLQ9H6Q4 476 aa4.26□□□□□ -1.73
NEK1-204ENST00000509912 EML4Q9HC35 981 aaKnown RBP4.26□□□□□ -1.73
NEK1-204ENST00000509912 TIGARQ9NQ88 270 aa4.26□□□□□ -1.73
NEK1-204ENST00000509912 DEPPQ9NTK1 212 aa4.26□□□□□ -1.73
NEK1-204ENST00000509912 TAS2R9Q9NYW1 312 aa4.26□□□□□ -1.73
NEK1-204ENST00000509912 IL20RAQ9UHF4 553 aa4.26□□□□□ -1.73
NEK1-204ENST00000509912 CAB39Q9Y376 341 aaPredicted RBP4.26□□□□□ -1.73
NEK1-204ENST00000509912 CCDC168Q8NDH2 2452 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 ZNF587BE7ETH6 402 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 H7C417 338 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 ERI3O43414 337 aaKnown RBP4.25□□□□□ -1.73
NEK1-204ENST00000509912 SERPIND1P05546 499 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 H1F0P07305 194 aaKnown RBP4.25□□□□□ -1.73
NEK1-204ENST00000509912 MYL2P10916 166 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 RFC3P40938 356 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 GK3PQ14409 553 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 DEFB134Q4QY38 66 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 UNC50Q53HI1 259 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 BEX5Q5H9J7 111 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 MTX3Q5HYI7 312 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 C1orf146Q5VVC0 180 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 WBP2NLQ6ICG8 309 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 IL17RELQ6ZVW7 336 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 KRTAP1-3Q8IUG1 177 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 RIMKLAQ8IXN7 391 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 KDM8Q8N371 416 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 SYT14Q8NB59 555 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 TAMM41Q96BW9 452 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 LRR1Q96L50 414 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 HBEGFQ99075 208 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 UGT2B28Q9BY64 529 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 DEFB127Q9H1M4 99 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 ACER3Q9NUN7 267 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 STUB1Q9UNE7 303 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 ERGIC3Q9Y282 383 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 SLC35A3Q9Y2D2 325 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 AMDHD2Q9Y303 409 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 HDGFL3Q9Y3E1 203 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 ZNF780BQ9Y6R6 833 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 PRRC2AP48634 2157 aaKnown RBP4.25□□□□□ -1.73
NEK1-204ENST00000509912 POLQO75417 2590 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 TMEM89A2RUT3 159 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 FAM166BA8MTA8 275 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 H3BNX3 289 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 DCTN3O75935 186 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 T-ENOLP0DO92 83 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 PRG2P13727 222 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 SOX3P41225 446 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 SLC1A6P48664 564 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 AQP5P55064 265 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 BTG2P78543 158 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 LOXL1Q08397 574 aaPredicted RBP4.25□□□□□ -1.73
NEK1-204ENST00000509912 ZNF763Q0D2J5 394 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 RCAN2Q14206 197 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 AANATQ16613 207 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 ZNF770Q6IQ21 691 aaPredicted RBP4.25□□□□□ -1.73
NEK1-204ENST00000509912 CRIP3Q6Q6R5 217 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 RPRMLQ8N4K4 120 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 OR1J4Q8NGS1 313 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 LHFPL5Q8TAF8 219 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 TMEM255BQ8WV15 326 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 CPNE4Q96A23 557 aaPredicted RBP4.25□□□□□ -1.73
NEK1-204ENST00000509912 TUBGCP3Q96CW5 907 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 ATG10Q9H0Y0 220 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 SPNS1Q9H2V7 528 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 ZNF665Q9H7R5 613 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 PNO1Q9NRX1 252 aaKnown RBP4.25□□□□□ -1.73
NEK1-204ENST00000509912 ZNF226Q9NYT6 803 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 SPRR3Q9UBC9 169 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 GMPPBQ9Y5P6 360 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 HIVEP1P15822 2718 aa4.25□□□□□ -1.73
NEK1-204ENST00000509912 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.24□□□□□ -1.73
NEK1-204ENST00000509912 A0A1W2PNV4 684 aa4.24□□□□□ -1.73
NEK1-204ENST00000509912 MEX3AA1L020 520 aaKnown RBP4.24□□□□□ -1.73
NEK1-204ENST00000509912 NPIPA2E9PIF3 369 aa4.24□□□□□ -1.73
NEK1-204ENST00000509912 NPIPA3F8WFD2 350 aa4.24□□□□□ -1.73
NEK1-204ENST00000509912 GATCO43716 136 aaKnown RBP4.24□□□□□ -1.73
NEK1-204ENST00000509912 FGF17O60258 216 aa4.24□□□□□ -1.73
NEK1-204ENST00000509912 CYTIPO60759 359 aa4.24□□□□□ -1.73
NEK1-204ENST00000509912 SNNO75324 88 aaPredicted RBP4.24□□□□□ -1.73
NEK1-204ENST00000509912 TNFSF13O75888 250 aa4.24□□□□□ -1.73
NEK1-204ENST00000509912 PDE9AO76083 593 aa4.24□□□□□ -1.73
NEK1-204ENST00000509912 MYO1DO94832 1006 aa4.24□□□□□ -1.73
NEK1-204ENST00000509912 SNAP29O95721 258 aa4.24□□□□□ -1.73
NEK1-204ENST00000509912 OCM2P0CE71 109 aa4.24□□□□□ -1.73
NEK1-204ENST00000509912 OCMP0CE72 109 aaPredicted RBP4.24□□□□□ -1.73
NEK1-204ENST00000509912 PTBP1P26599 531 aaKnown RBP eCLIP4.24□□□□□ -1.73
NEK1-204ENST00000509912 GIFP27352 417 aa4.24□□□□□ -1.73
NEK1-204ENST00000509912 EMX2Q04743 252 aa4.24□□□□□ -1.73
NEK1-204ENST00000509912 SRSF4Q08170 494 aaKnown RBP4.24□□□□□ -1.73
NEK1-204ENST00000509912 ARHGAP11BQ3KRB8 267 aa4.24□□□□□ -1.73
NEK1-204ENST00000509912 NET1Q7Z628 596 aaPredicted RBP4.24□□□□□ -1.73
NEK1-204ENST00000509912 TMEM163Q8TC26 289 aa4.24□□□□□ -1.73
NEK1-204ENST00000509912 C16orf78Q8WTQ4 265 aa4.24□□□□□ -1.73
NEK1-204ENST00000509912 CAPSLQ8WWF8 208 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms