RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, human

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-216	ENST00000509784	C14orf79	Q96F83	325 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	ZBED6CL	Q96FA7	236 aa	Predicted RBP	2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	WBP1	Q96G27	269 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	TPD52L3	Q96J77	140 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	SMIM14	Q96QK8	99 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	PSKH2	Q96QS6	385 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	PANX1	Q96RD7	426 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	NIPSNAP1	Q9BPW8	284 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	C19orf43	Q9BQ61	176 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	MARVELD1	Q9BSK0	173 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	CHCHD5	Q9BSY4	110 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	DOHH	Q9BU89	302 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	EGLN1	Q9GZT9	426 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	SPNS1	Q9H2V7	528 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	PIGU	Q9H490	435 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	ELOVL6	Q9H5J4	265 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	TMEM38A	Q9H6F2	299 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	HEXA-AS1	Q9H8Q6	139 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	TRIM45	Q9H8W5	580 aa	Predicted RBP	2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	TPT1P8	Q9HAU6	139 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	FOLH1B	Q9HBA9	442 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	FGF20	Q9NP95	211 aa	Predicted RBP	2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	EXOSC4	Q9NPD3	245 aa	Known RBP	2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	ISYNA1	Q9NPH2	558 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	HPF1	Q9NWY4	346 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	TXNL4B	Q9NX01	149 aa	Known RBP	2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	TAS2R3	Q9NYW6	316 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	DNAJC27	Q9NZQ0	273 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	MIOX	Q9UGB7	285 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	CLEC2D	Q9UHP7	191 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	ZNF346	Q9UL40	294 aa	Known RBP	2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	RAB23	Q9ULC3	237 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	TMCC3	Q9ULS5	477 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	MGAT4A	Q9UM21	535 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	NDRG2	Q9UN36	371 aa	Known RBP	2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	SSR3	Q9UNL2	185 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	SCML2	Q9UQR0	700 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	GINS2	Q9Y248	185 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	SLC9A8	Q9Y2E8	581 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	FBXO7	Q9Y3I1	522 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	ENPP4	Q9Y6X5	453 aa		2.57	□□□□□ -2
CALCOCO2-216	ENST00000509784	TDRD15	B5MCY1	1934 aa	Known RBP	2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	ANAPC1	Q9H1A4	1944 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	PLXNB3	Q9ULL4	1909 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	MEIKIN	A0A087WXM9	373 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	TRAV19	A0A0A6YYK7	116 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784		A0A1B0GVI7	797 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	TRDV1	A0A1B0GX56	115 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784		A0A1W2PQL4	384 aa	Predicted RBP	2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	IRGM	A1A4Y4	181 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	ARL5C	A6NH57	179 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	IQCF5	A8MTL0	148 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	ATP6V1G2-DDX39B	F2Z307	99 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	INMT-MINDY4	F8WBC2	141 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784		I3L521	148 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	BTN3A3	O00478	584 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	FAAH	O00519	579 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	NTN3	O00634	580 aa	Predicted RBP	2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	CXCL11	O14625	94 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	KDELR3	O43731	214 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	SLC19A2	O60779	497 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	SCO1	O75880	301 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	CPSF4	O95639	269 aa	Known RBP	2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	RAB36	O95755	333 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	SNAI1	O95863	264 aa	Predicted RBP	2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	IFNA7	P01567	189 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	TRBC1	P01850	177 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	OR56A5	P0C7T3	313 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	SULT1A3	P0DMM9	295 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	SULT1A4	P0DMN0	295 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	RRAS	P10301	218 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	LAMP1	P11279	417 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	ANXA3	P12429	323 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	ICAM2	P13598	275 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	ZNF250	P15622	560 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	ZNF7	P17097	686 aa	Predicted RBP	2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	IDS	P22304	550 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	CFL1	P23528	166 aa	Known RBP	2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	PSMA1	P25786	263 aa	Known RBP	2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	STOM	P27105	288 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	AQP1	P29972	269 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	FGF9	P31371	208 aa	Predicted RBP	2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	PRDX2	P32119	198 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	BTC	P35070	178 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	STK19	P49842	368 aa	Predicted RBP	2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	GBX2	P52951	348 aa	Predicted RBP	2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	ACLY	P53396	1101 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	ARPP19	P56211	112 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	RPS25	P62851	125 aa	Known RBP	2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	SELENOW	P63302	87 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	MRPS6	P82932	125 aa	Known RBP	2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	HTD2	P86397	168 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	MXD1	Q05195	221 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	ZNF33B	Q06732	778 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	LRRC74A	Q0VAA2	488 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	TPBG	Q13641	420 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	ENPP2	Q13822	863 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	C1D	Q13901	141 aa	Known RBP	2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	NCF4	Q15080	339 aa		2.56	□□□□□ -2
CALCOCO2-216	ENST00000509784	PTGES3	Q15185	160 aa	Known RBP	2.56	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms