RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 H0YL77 283 aa15.12■□□□□ 0.01
TPM3-220ENST00000509601 TCF21O43680 179 aa15.12■□□□□ 0.01
TPM3-220ENST00000509601 CCNB2O95067 398 aa15.12■□□□□ 0.01
TPM3-220ENST00000509601 PNPP00491 289 aa15.12■□□□□ 0.01
TPM3-220ENST00000509601 SBK2P0C263 348 aa15.12■□□□□ 0.01
TPM3-220ENST00000509601 ACSM4P0C7M7 580 aa15.12■□□□□ 0.01
TPM3-220ENST00000509601 TNFRSF1AP19438 455 aa15.12■□□□□ 0.01
TPM3-220ENST00000509601 CALB2P22676 271 aa15.12■□□□□ 0.01
TPM3-220ENST00000509601 TNFSF4P23510 183 aa15.12■□□□□ 0.01
TPM3-220ENST00000509601 ZFP36P26651 326 aaKnown RBP15.12■□□□□ 0.01
TPM3-220ENST00000509601 PYCR1P32322 319 aa15.12■□□□□ 0.01
TPM3-220ENST00000509601 MICAQ29983 383 aa15.12■□□□□ 0.01
TPM3-220ENST00000509601 RPL13AP3Q6NVV1 102 aa15.12■□□□□ 0.01
TPM3-220ENST00000509601 LRRC28Q86X40 367 aaPredicted RBP15.12■□□□□ 0.01
TPM3-220ENST00000509601 CYB561A3Q8NBI2 242 aa15.12■□□□□ 0.01
TPM3-220ENST00000509601 CCDC197Q8NCU1 140 aa15.12■□□□□ 0.01
TPM3-220ENST00000509601 MAP6Q96JE9 813 aa15.12■□□□□ 0.01
TPM3-220ENST00000509601 OR2V2Q96R30 315 aa15.12■□□□□ 0.01
TPM3-220ENST00000509601 PITX2Q99697 317 aa15.12■□□□□ 0.01
TPM3-220ENST00000509601 GAL3ST1Q99999 423 aa15.12■□□□□ 0.01
TPM3-220ENST00000509601 MUC13Q9H3R2 512 aa15.12■□□□□ 0.01
TPM3-220ENST00000509601 ISPDA4D126 451 aa15.11■□□□□ 0.01
TPM3-220ENST00000509601 F5H5K5 113 aa15.11■□□□□ 0.01
TPM3-220ENST00000509601 HLA-DQA2P01906 255 aa15.11■□□□□ 0.01
TPM3-220ENST00000509601 ECH1Q13011 328 aa15.11■□□□□ 0.01
TPM3-220ENST00000509601 OR2T5Q6IEZ7 315 aa15.11■□□□□ 0.01
TPM3-220ENST00000509601 ZNF771Q7L3S4 317 aaPredicted RBP15.11■□□□□ 0.01
TPM3-220ENST00000509601 PEG10Q86TG7 708 aaKnown RBP15.11■□□□□ 0.01
TPM3-220ENST00000509601 LNX2Q8N448 690 aa15.11■□□□□ 0.01
TPM3-220ENST00000509601 ATG16L2Q8NAA4 619 aa15.11■□□□□ 0.01
TPM3-220ENST00000509601 SLC37A3Q8NCC5 494 aa15.11■□□□□ 0.01
TPM3-220ENST00000509601 OR10S1Q8NGN2 331 aa15.11■□□□□ 0.01
TPM3-220ENST00000509601 OR2AJ1Q8NGZ0 328 aa15.11■□□□□ 0.01
TPM3-220ENST00000509601 OR13G1Q8NGZ3 307 aa15.11■□□□□ 0.01
TPM3-220ENST00000509601 OR2T29Q8NH02 315 aa15.11■□□□□ 0.01
TPM3-220ENST00000509601 OR4Q3Q8NH05 313 aa15.11■□□□□ 0.01
TPM3-220ENST00000509601 CLPTM1LQ96KA5 538 aa15.11■□□□□ 0.01
TPM3-220ENST00000509601 SLC30A2Q9BRI3 323 aa15.11■□□□□ 0.01
TPM3-220ENST00000509601 TSSK6Q9BXA6 273 aa15.11■□□□□ 0.01
TPM3-220ENST00000509601 WDR76Q9H967 626 aa15.11■□□□□ 0.01
TPM3-220ENST00000509601 GCM1Q9NP62 436 aa15.11■□□□□ 0.01
TPM3-220ENST00000509601 UBAP1Q9NZ09 502 aa15.11■□□□□ 0.01
TPM3-220ENST00000509601 PPP1R3CQ9UQK1 317 aa15.11■□□□□ 0.01
TPM3-220ENST00000509601 LOC105371242A0A075B767 164 aa15.1■□□□□ 0.01
TPM3-220ENST00000509601 A0A1B0GWJ7 208 aa15.1■□□□□ 0.01
TPM3-220ENST00000509601 TVP23AA6NH52 213 aa15.1■□□□□ 0.01
TPM3-220ENST00000509601 IQCF6A8MYZ5 107 aa15.1■□□□□ 0.01
TPM3-220ENST00000509601 ACOT8O14734 319 aa15.1■□□□□ 0.01
TPM3-220ENST00000509601 SURF4O15260 269 aa15.1■□□□□ 0.01
TPM3-220ENST00000509601 MLNRO43193 412 aa15.1■□□□□ 0.01
TPM3-220ENST00000509601 PSKH1P11801 424 aa15.1■□□□□ 0.01
TPM3-220ENST00000509601 RPS27P42677 84 aaKnown RBP15.1■□□□□ 0.01
TPM3-220ENST00000509601 TRAP1Q12931 704 aaKnown RBP15.1■□□□□ 0.01
TPM3-220ENST00000509601 SLC27A4Q6P1M0 643 aa15.1■□□□□ 0.01
TPM3-220ENST00000509601 LYPD4Q6UWN0 246 aa15.1■□□□□ 0.01
TPM3-220ENST00000509601 AQP11Q8NBQ7 271 aa15.1■□□□□ 0.01
TPM3-220ENST00000509601 OR52L1Q8NGH7 329 aa15.1■□□□□ 0.01
TPM3-220ENST00000509601 OR51L1Q8NGJ5 315 aa15.1■□□□□ 0.01
TPM3-220ENST00000509601 ZNF582Q96NG8 517 aaPredicted RBP15.1■□□□□ 0.01
TPM3-220ENST00000509601 ATF6BQ99941 703 aa15.1■□□□□ 0.01
TPM3-220ENST00000509601 REPIN1Q9BWE0 567 aaKnown RBP15.1■□□□□ 0.01
TPM3-220ENST00000509601 RBM4Q9BWF3 364 aaKnown RBP15.1■□□□□ 0.01
TPM3-220ENST00000509601 DGCR6LQ9BY27 220 aa15.1■□□□□ 0.01
TPM3-220ENST00000509601 NMNAT2Q9BZQ4 307 aa15.1■□□□□ 0.01
TPM3-220ENST00000509601 C1orf21Q9H246 121 aa15.1■□□□□ 0.01
TPM3-220ENST00000509601 PATZ1Q9HBE1 687 aaKnown RBP15.1■□□□□ 0.01
TPM3-220ENST00000509601 U3KQV3 271 aa15.1■□□□□ 0.01
TPM3-220ENST00000509601 A0A0G2JMP0 313 aa15.09■□□□□ 0.01
TPM3-220ENST00000509601 A0A0X1KG70 313 aa15.09■□□□□ 0.01
TPM3-220ENST00000509601 TMEM178BH3BS89 294 aa15.09■□□□□ 0.01
TPM3-220ENST00000509601 VENTXO95231 258 aa15.09■□□□□ 0.01
TPM3-220ENST00000509601 ZNF823P16415 610 aa15.09■□□□□ 0.01
TPM3-220ENST00000509601 ANOS1P23352 680 aa15.09■□□□□ 0.01
TPM3-220ENST00000509601 PMELP40967 661 aa15.09■□□□□ 0.01
TPM3-220ENST00000509601 PRSS12P56730 875 aa15.09■□□□□ 0.01
TPM3-220ENST00000509601 LCN2P80188 198 aa15.09■□□□□ 0.01
TPM3-220ENST00000509601 GK2Q14410 553 aaPredicted RBP15.09■□□□□ 0.01
TPM3-220ENST00000509601 ZMYND11Q15326 602 aa15.09■□□□□ 0.01
TPM3-220ENST00000509601 TMEM155Q4W5P6 130 aa15.09■□□□□ 0.01
TPM3-220ENST00000509601 FAM98BQ52LJ0 330 aaKnown RBP15.09■□□□□ 0.01
TPM3-220ENST00000509601 PROKR2Q8NFJ6 384 aa15.09■□□□□ 0.01
TPM3-220ENST00000509601 OR4M2Q8NGB6 313 aa15.09■□□□□ 0.01
TPM3-220ENST00000509601 OR2T4Q8NH00 348 aa15.09■□□□□ 0.01
TPM3-220ENST00000509601 MEGF10Q96KG7 1140 aa15.09■□□□□ 0.01
TPM3-220ENST00000509601 OCEL1Q9H607 264 aa15.09■□□□□ 0.01
TPM3-220ENST00000509601 OPN4Q9UHM6 478 aa15.09■□□□□ 0.01
TPM3-220ENST00000509601 KCNG2Q9UJ96 466 aa15.09■□□□□ 0.01
TPM3-220ENST00000509601 PRPF19Q9UMS4 504 aaKnown RBP15.09■□□□□ 0.01
TPM3-220ENST00000509601 SAMHD1Q9Y3Z3 626 aaKnown RBP15.09■□□□□ 0.01
TPM3-220ENST00000509601 J3QLI3 93 aa15.08■□□□□ 0
TPM3-220ENST00000509601 LCATP04180 440 aa15.08■□□□□ 0
TPM3-220ENST00000509601 SLC6A9P48067 706 aa15.08■□□□□ 0
TPM3-220ENST00000509601 MMP16P51512 607 aa15.08■□□□□ 0
TPM3-220ENST00000509601 TPTEP56180 551 aa15.08■□□□□ 0
TPM3-220ENST00000509601 BTG1P62324 171 aa15.08■□□□□ 0
TPM3-220ENST00000509601 CRMP1Q14194 572 aa15.08■□□□□ 0
TPM3-220ENST00000509601 PCK2Q16822 640 aa15.08■□□□□ 0
TPM3-220ENST00000509601 DCAF12L2Q5VW00 463 aa15.08■□□□□ 0
TPM3-220ENST00000509601 CD300LDQ6UXZ3 194 aa15.08■□□□□ 0
TPM3-220ENST00000509601 ZNF511Q8NB15 262 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms