RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 RABL3Q5HYI8 236 aa13.26□□□□□ -0.29
CXCL1-202ENST00000509101 PRRC1Q96M27 445 aa13.26□□□□□ -0.29
CXCL1-202ENST00000509101 Q96M85 177 aa13.26□□□□□ -0.29
CXCL1-202ENST00000509101 RERGLQ9H628 205 aa13.26□□□□□ -0.29
CXCL1-202ENST00000509101 GRHPRQ9UBQ7 328 aa13.26□□□□□ -0.29
CXCL1-202ENST00000509101 A4GNTQ9UNA3 340 aa13.26□□□□□ -0.29
CXCL1-202ENST00000509101 NBEAL2Q6ZNJ1 2754 aa13.25□□□□□ -0.29
CXCL1-202ENST00000509101 XKRYO14609 159 aa13.25□□□□□ -0.29
CXCL1-202ENST00000509101 RER1O15258 196 aa13.25□□□□□ -0.29
CXCL1-202ENST00000509101 FAM20BO75063 409 aa13.25□□□□□ -0.29
CXCL1-202ENST00000509101 FPR3P25089 353 aa13.25□□□□□ -0.29
CXCL1-202ENST00000509101 PSMB10P40306 273 aa13.25□□□□□ -0.29
CXCL1-202ENST00000509101 SLC9A3P48764 834 aa13.25□□□□□ -0.29
CXCL1-202ENST00000509101 C2orf68Q2NKX9 166 aa13.25□□□□□ -0.29
CXCL1-202ENST00000509101 FBLN7Q53RD9 439 aa13.25□□□□□ -0.29
CXCL1-202ENST00000509101 PRAMEF6Q5VXH4 476 aa13.25□□□□□ -0.29
CXCL1-202ENST00000509101 NANOGP8Q6NSW7 305 aa13.25□□□□□ -0.29
CXCL1-202ENST00000509101 SCCPDHQ8NBX0 429 aa13.25□□□□□ -0.29
CXCL1-202ENST00000509101 OR11L1Q8NGX0 322 aa13.25□□□□□ -0.29
CXCL1-202ENST00000509101 LHX4Q969G2 390 aa13.25□□□□□ -0.29
CXCL1-202ENST00000509101 APOBEC3DQ96AK3 386 aaPredicted RBP13.25□□□□□ -0.29
CXCL1-202ENST00000509101 ZNF570Q96NI8 536 aa13.25□□□□□ -0.29
CXCL1-202ENST00000509101 WDFY2Q96P53 400 aa13.25□□□□□ -0.29
CXCL1-202ENST00000509101 TRIM15Q9C019 465 aa13.25□□□□□ -0.29
CXCL1-202ENST00000509101 UFSP2Q9NUQ7 469 aa13.25□□□□□ -0.29
CXCL1-202ENST00000509101 TMEM100Q9NV29 134 aa13.25□□□□□ -0.29
CXCL1-202ENST00000509101 RHCGQ9UBD6 479 aa13.25□□□□□ -0.29
CXCL1-202ENST00000509101 ATPIF1Q9UII2 106 aa13.25□□□□□ -0.29
CXCL1-202ENST00000509101 POLR1DQ9Y2S0 133 aa13.25□□□□□ -0.29
CXCL1-202ENST00000509101 PLXNB1O43157 2135 aa13.24□□□□□ -0.29
CXCL1-202ENST00000509101 IGHV1-69DA0A0B4J2H0 117 aa13.24□□□□□ -0.29
CXCL1-202ENST00000509101 A0A0U1RQK1 487 aa13.24□□□□□ -0.29
CXCL1-202ENST00000509101 PRSS37A4D1T9 235 aa13.24□□□□□ -0.29
CXCL1-202ENST00000509101 HTR3EA5X5Y0 456 aa13.24□□□□□ -0.29
CXCL1-202ENST00000509101 ALX3O95076 343 aa13.24□□□□□ -0.29
CXCL1-202ENST00000509101 IGHV1-69P01742 117 aa13.24□□□□□ -0.29
CXCL1-202ENST00000509101 GATA4P43694 442 aa13.24□□□□□ -0.29
CXCL1-202ENST00000509101 GPR4P46093 362 aa13.24□□□□□ -0.29
CXCL1-202ENST00000509101 YAP1P46937 504 aaKnown RBP13.24□□□□□ -0.29
CXCL1-202ENST00000509101 NPY4RP50391 375 aa13.24□□□□□ -0.29
CXCL1-202ENST00000509101 MAB21L1Q13394 359 aa13.24□□□□□ -0.29
CXCL1-202ENST00000509101 CYBRD1Q53TN4 286 aa13.24□□□□□ -0.29
CXCL1-202ENST00000509101 CLEC12AQ5QGZ9 265 aa13.24□□□□□ -0.29
CXCL1-202ENST00000509101 METTL11BQ5VVY1 283 aa13.24□□□□□ -0.29
CXCL1-202ENST00000509101 CD276Q5ZPR3 534 aa13.24□□□□□ -0.29
CXCL1-202ENST00000509101 Q6ZSV7 163 aa13.24□□□□□ -0.29
CXCL1-202ENST00000509101 CALHM3Q86XJ0 350 aa13.24□□□□□ -0.29
CXCL1-202ENST00000509101 LDLRAD3Q86YD5 345 aa13.24□□□□□ -0.29
CXCL1-202ENST00000509101 PDZD9Q8IXQ8 264 aa13.24□□□□□ -0.29
CXCL1-202ENST00000509101 Q8TCH9 128 aa13.24□□□□□ -0.29
CXCL1-202ENST00000509101 TPD52L3Q96J77 140 aa13.24□□□□□ -0.29
CXCL1-202ENST00000509101 ECSITQ9BQ95 431 aa13.24□□□□□ -0.29
CXCL1-202ENST00000509101 SYT4Q9H2B2 425 aa13.24□□□□□ -0.29
CXCL1-202ENST00000509101 ERVK-18Q9QC07 812 aa13.24□□□□□ -0.29
CXCL1-202ENST00000509101 COA3Q9Y2R0 106 aaPredicted RBP13.24□□□□□ -0.29
CXCL1-202ENST00000509101 ELOVL7A1L3X0 281 aa13.23□□□□□ -0.29
CXCL1-202ENST00000509101 C3orf80F5H4A9 247 aa13.23□□□□□ -0.29
CXCL1-202ENST00000509101 G3V4G9 280 aa13.23□□□□□ -0.29
CXCL1-202ENST00000509101 IMPA2O14732 288 aa13.23□□□□□ -0.29
CXCL1-202ENST00000509101 SLC16A7O60669 478 aa13.23□□□□□ -0.29
CXCL1-202ENST00000509101 EDF1O60869 148 aaKnown RBP13.23□□□□□ -0.29
CXCL1-202ENST00000509101 IFNA14P01570 189 aa13.23□□□□□ -0.29
CXCL1-202ENST00000509101 CD14P08571 375 aa13.23□□□□□ -0.29
CXCL1-202ENST00000509101 IFNA8P32881 189 aa13.23□□□□□ -0.29
CXCL1-202ENST00000509101 IER3P46695 156 aa13.23□□□□□ -0.29
CXCL1-202ENST00000509101 RAD23AP54725 363 aa13.23□□□□□ -0.29
CXCL1-202ENST00000509101 LSM6P62312 80 aaKnown RBP13.23□□□□□ -0.29
CXCL1-202ENST00000509101 PRKCDQ05655 676 aa13.23□□□□□ -0.29
CXCL1-202ENST00000509101 KRR1Q13601 381 aaKnown RBP13.23□□□□□ -0.29
CXCL1-202ENST00000509101 MPPED2Q15777 294 aa13.23□□□□□ -0.29
CXCL1-202ENST00000509101 ANKDD1AQ495B1 522 aa13.23□□□□□ -0.29
CXCL1-202ENST00000509101 SFRP4Q6FHJ7 346 aaPredicted RBP13.23□□□□□ -0.29
CXCL1-202ENST00000509101 FAM122BQ7Z309 247 aa13.23□□□□□ -0.29
CXCL1-202ENST00000509101 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.23□□□□□ -0.29
CXCL1-202ENST00000509101 GLB1L2Q8IW92 636 aa13.23□□□□□ -0.29
CXCL1-202ENST00000509101 OFCC1Q8IZS5 231 aa13.23□□□□□ -0.29
CXCL1-202ENST00000509101 BOLLQ8N9W6 283 aaKnown RBP13.23□□□□□ -0.29
CXCL1-202ENST00000509101 HCAR1Q9BXC0 346 aa13.23□□□□□ -0.29
CXCL1-202ENST00000509101 SIRPDQ9H106 197 aa13.23□□□□□ -0.29
CXCL1-202ENST00000509101 SMURF1Q9HCE7 757 aa13.23□□□□□ -0.29
CXCL1-202ENST00000509101 A0A1B0GWJ7 208 aa13.22□□□□□ -0.29
CXCL1-202ENST00000509101 J3KTA2 159 aa13.22□□□□□ -0.29
CXCL1-202ENST00000509101 CDC42EP2O14613 210 aa13.22□□□□□ -0.29
CXCL1-202ENST00000509101 ADAM20O43506 726 aa13.22□□□□□ -0.29
CXCL1-202ENST00000509101 AHCYL1O43865 530 aa13.22□□□□□ -0.29
CXCL1-202ENST00000509101 KHDRBS3O75525 346 aaKnown RBP13.22□□□□□ -0.29
CXCL1-202ENST00000509101 PRB2P02812 416 aaPredicted RBP13.22□□□□□ -0.29
CXCL1-202ENST00000509101 LIPFP07098 398 aa13.22□□□□□ -0.29
CXCL1-202ENST00000509101 CSF1P09603 554 aa13.22□□□□□ -0.29
CXCL1-202ENST00000509101 ZNF26P17031 533 aaPredicted RBP13.22□□□□□ -0.29
CXCL1-202ENST00000509101 CD200P41217 278 aa13.22□□□□□ -0.29
CXCL1-202ENST00000509101 CYLC2Q14093 348 aaPredicted RBP13.22□□□□□ -0.29
CXCL1-202ENST00000509101 BEAN1Q3B7T3 259 aa13.22□□□□□ -0.29
CXCL1-202ENST00000509101 DHRS7BQ6IAN0 325 aaPredicted RBP13.22□□□□□ -0.29
CXCL1-202ENST00000509101 GDPGP1Q6ZNW5 385 aa13.22□□□□□ -0.29
CXCL1-202ENST00000509101 CELF2-AS1Q8N7Q2 184 aa13.22□□□□□ -0.29
CXCL1-202ENST00000509101 PNLDC1Q8NA58 520 aaKnown RBP13.22□□□□□ -0.29
CXCL1-202ENST00000509101 ZSCAN4Q8NAM6 433 aaPredicted RBP13.22□□□□□ -0.29
CXCL1-202ENST00000509101 TSPEARQ8WU66 669 aa13.22□□□□□ -0.29
CXCL1-202ENST00000509101 ERGIC1Q969X5 290 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms