RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 IGHV3-13P01766 116 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 ADRA2AP08913 450 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 SPARCP09486 303 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 CSF3P09919 207 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 CLUP10909 449 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 FOSL1P15407 271 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 SLC15A1P46059 708 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 TPTEP56180 551 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 RPS7P62081 194 aaKnown RBP6.23□□□□□ -1.41
GYPB-206ENST00000506516 PPP1CBP62140 327 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 PPP2R2BQ00005 443 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 DBPQ10586 325 aaPredicted RBP6.23□□□□□ -1.41
GYPB-206ENST00000506516 MBNL2Q5VZF2 373 aaKnown RBP6.23□□□□□ -1.41
GYPB-206ENST00000506516 CDPF1Q6NVV7 123 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 CFAP77Q6ZQR2 320 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 RHOUQ7L0Q8 258 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 CXXC5Q7LFL8 322 aaKnown RBP6.23□□□□□ -1.41
GYPB-206ENST00000506516 SHFQ7M4L6 423 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 DCXRQ7Z4W1 244 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 LRP11Q86VZ4 500 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.23□□□□□ -1.41
GYPB-206ENST00000506516 ERI1Q8IV48 349 aaKnown RBP6.23□□□□□ -1.41
GYPB-206ENST00000506516 ZNF101Q8IZC7 436 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 ZNF540Q8NDQ6 660 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 SLC25A40Q8TBP6 338 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 KLF14Q8TD94 323 aaPredicted RBP6.23□□□□□ -1.41
GYPB-206ENST00000506516 ZNRF4Q8WWF5 429 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 SLC7A6Q92536 515 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 APOBEC3DQ96AK3 386 aaPredicted RBP6.23□□□□□ -1.41
GYPB-206ENST00000506516 ANAPC16Q96DE5 110 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 MARS2Q96GW9 593 aaKnown RBP6.23□□□□□ -1.41
GYPB-206ENST00000506516 INTS14Q96SY0 518 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 TEAD3Q99594 435 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 CIB1Q99828 191 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 OR2J1Q9GZK6 312 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 RIBC2Q9H4K1 309 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 MED20Q9H944 212 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 WDR76Q9H967 626 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 MYOZ1Q9NP98 299 aaPredicted RBP6.23□□□□□ -1.41
GYPB-206ENST00000506516 CYSLTR2Q9NS75 346 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 CENPMQ9NSP4 180 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 COMMD3-BMI1R4GMX3 469 aa6.23□□□□□ -1.41
GYPB-206ENST00000506516 MAST4O15021 2626 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 ANKRD17O75179 2603 aaKnown RBP6.22□□□□□ -1.41
GYPB-206ENST00000506516 IGLV3-9A0A075B6K5 115 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 ZNF878C9JN71 531 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 CLPTM1O96005 669 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 APOC1P02654 83 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 LCATP04180 440 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 DBHP09172 617 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 NAT2P11245 290 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 RPS27P42677 84 aaKnown RBP6.22□□□□□ -1.41
GYPB-206ENST00000506516 ALDH3B1P43353 468 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 PDLIM4P50479 330 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 ALDH3A2P51648 485 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 CDC42P60953 191 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 ERVS71-1P61550 626 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 GRB2P62993 217 aaKnown RBP6.22□□□□□ -1.41
GYPB-206ENST00000506516 MALLQ13021 153 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 TNK1Q13470 666 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 APOFQ13790 326 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 EIF2B1Q14232 305 aaKnown RBP6.22□□□□□ -1.41
GYPB-206ENST00000506516 PCK2Q16822 640 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 PCGF3Q3KNV8 242 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 ALKBH6Q3KRA9 238 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 ZMAT1Q5H9K5 638 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 SPATA46Q5T0L3 261 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 LINC01590Q5TEZ4 76 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 LCN1P1Q5VSP4 162 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 SLX4IPQ5VYV7 408 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 C12orf73Q69YU5 71 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 DRAM2Q6UX65 266 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 ZBTB49Q6ZSB9 765 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 RFPL4BQ6ZWI9 263 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 MEPCEQ7L2J0 689 aaKnown RBP6.22□□□□□ -1.41
GYPB-206ENST00000506516 DPY19L4Q7Z388 723 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 KRTAP1-3Q8IUG1 177 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 LURAP1LQ8IV03 231 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 ZCCHC24Q8N2G6 241 aaKnown RBP6.22□□□□□ -1.41
GYPB-206ENST00000506516 PQLC1Q8N2U9 271 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 TCEANCQ8N8B7 351 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 OR6N2Q8NGY6 317 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 FBLIM1Q8WUP2 373 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 TRUB1Q8WWH5 349 aaKnown RBP6.22□□□□□ -1.41
GYPB-206ENST00000506516 FAM168AQ92567 244 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 EME1Q96AY2 570 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 HAVCR1Q96D42 359 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 CMBLQ96DG6 245 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 SLAMF6Q96DU3 332 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 ZMYND19Q96E35 227 aaPredicted RBP6.22□□□□□ -1.41
GYPB-206ENST00000506516 MAP6Q96JE9 813 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 C18orf12Q96KH6 178 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 SORCS2Q96PQ0 1159 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 KCNJ15Q99712 375 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 COPS4Q9BT78 406 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 HCAR1Q9BXC0 346 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 GABARAPL3Q9BY60 117 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 TOR3AQ9H497 397 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 SP140LQ9H930 580 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 MARCH7Q9H992 704 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms