RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 SPSB1Q96BD6 273 aa5.17□□□□□ -1.58
SCLT1-207ENST00000506233 SP140LQ9H930 580 aa5.17□□□□□ -1.58
SCLT1-207ENST00000506233 WDR54Q9H977 334 aa5.17□□□□□ -1.58
SCLT1-207ENST00000506233 MKKSQ9NPJ1 570 aaPredicted RBP5.17□□□□□ -1.58
SCLT1-207ENST00000506233 KLHL1Q9NR64 748 aa5.17□□□□□ -1.58
SCLT1-207ENST00000506233 FAM206AQ9NX38 181 aa5.17□□□□□ -1.58
SCLT1-207ENST00000506233 KCNG2Q9UJ96 466 aa5.17□□□□□ -1.58
SCLT1-207ENST00000506233 FBXL3Q9UKT7 428 aa5.17□□□□□ -1.58
SCLT1-207ENST00000506233 ZNF337Q9Y3M9 751 aa5.17□□□□□ -1.58
SCLT1-207ENST00000506233 A0A0A6YYD4 124 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 XKRY2A2RUG3 117 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 SS18L1O75177 396 aaPredicted RBP5.16□□□□□ -1.58
SCLT1-207ENST00000506233 CDRT1O95170 752 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 SLC2A2P11168 524 aaPredicted RBP5.16□□□□□ -1.58
SCLT1-207ENST00000506233 SLC9A3P48764 834 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 CENPAP49450 140 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 CCR4P51679 360 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 ARHGDIAP52565 204 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 LGALS3BPQ08380 585 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 ASAH1Q13510 395 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 SERTAD2Q14140 314 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 BCL2A1Q16548 175 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 ZNF181Q2M3W8 571 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 NKAIN1Q4KMZ8 207 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 EIPR1Q53HC9 387 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 LCE2AQ5TA79 106 aaPredicted RBP5.16□□□□□ -1.58
SCLT1-207ENST00000506233 TMEM88Q6PEY1 159 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 TUBA3EQ6PEY2 450 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 PLXDC2Q6UX71 529 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 DNAAF1Q8NEP3 725 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 SLC26A10Q8NG04 563 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 GLMPQ8WWB7 406 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 GHSRQ92847 366 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 YIPF5Q969M3 257 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 ZHX1-C8orf76Q96EF9 292 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 DIRC2Q96SL1 478 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 SRXN1Q9BYN0 137 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 TTTY10Q9BZA0 68 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 EVA1AQ9H8M9 152 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 SLC6A5Q9Y345 797 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 EXOSC1Q9Y3B2 195 aaKnown RBP5.16□□□□□ -1.58
SCLT1-207ENST00000506233 TRAV1-2A0A0B4J238 106 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 PNMA8CA0A1B0GUJ8 204 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 ANKUB1A6NFN9 424 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 PSMD9O00233 223 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 HOXA3O43365 443 aaPredicted RBP5.16□□□□□ -1.58
SCLT1-207ENST00000506233 GMFGO60234 142 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 ZNF12P17014 697 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 LCN1P31025 176 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 PYCR1P32322 319 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 SMIM11AP58511 58 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 HNRNPA0Q13151 305 aaKnown RBP5.16□□□□□ -1.58
SCLT1-207ENST00000506233 CBFBQ13951 182 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 TP53I3Q53FA7 332 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 LYSMD4Q5XG99 296 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 OR5M10Q6IEU7 315 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 SYS1Q8N2H4 156 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 KDM8Q8N371 416 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 EID2Q8N6I1 236 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 OR14L1PQ8NHC6 308 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 SNX18Q96RF0 628 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 B3GNT4Q9C0J1 378 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 CPNE5Q9HCH3 593 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 SCN3BQ9NY72 215 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 SPIN1Q9Y657 262 aaPredicted RBP5.16□□□□□ -1.58
SCLT1-207ENST00000506233 LHFPL6Q9Y693 200 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 A0A0A0MQY5 61 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 LOC100506127A0A0U1RQW1 187 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 OR2J2O76002 312 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 GLCEO94923 617 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 CSTAP01040 98 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 CCL3P10147 92 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 RPS18P62269 152 aaKnown RBP5.16□□□□□ -1.58
SCLT1-207ENST00000506233 FOXF1Q12946 379 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 KLF9Q13886 244 aaPredicted RBP5.16□□□□□ -1.58
SCLT1-207ENST00000506233 ZNF846Q147U1 533 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 QPRTQ15274 297 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 RTL4Q6ZR62 310 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 OAFQ86UD1 273 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 HAPLN4Q86UW8 402 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 CROCCP3Q8IVE0 287 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 PM20D2Q8IYS1 436 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 SLC43A2Q8N370 569 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 OR6S1Q8NH40 331 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 PIGKQ92643 395 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 FAM46BQ96A09 425 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 TMED9Q9BVK6 235 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 PNO1Q9NRX1 252 aaKnown RBP5.16□□□□□ -1.58
SCLT1-207ENST00000506233 MRPL39Q9NYK5 338 aaKnown RBP5.16□□□□□ -1.58
SCLT1-207ENST00000506233 ZNF581Q9P0T4 197 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 B9D1Q9UPM9 204 aa5.16□□□□□ -1.58
SCLT1-207ENST00000506233 A6NIN4 97 aa5.15□□□□□ -1.58
SCLT1-207ENST00000506233 GMNNO75496 209 aa5.15□□□□□ -1.58
SCLT1-207ENST00000506233 SOX30O94993 753 aa5.15□□□□□ -1.58
SCLT1-207ENST00000506233 PTHLHP12272 177 aa5.15□□□□□ -1.58
SCLT1-207ENST00000506233 SLC6A1P30531 599 aa5.15□□□□□ -1.58
SCLT1-207ENST00000506233 P2RX1P51575 399 aa5.15□□□□□ -1.58
SCLT1-207ENST00000506233 SNU13P55769 128 aaKnown RBP5.15□□□□□ -1.58
SCLT1-207ENST00000506233 NSDHLQ15738 373 aa5.15□□□□□ -1.58
SCLT1-207ENST00000506233 RANBP3LQ86VV4 465 aaPredicted RBP5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms