RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 MCHR2Q969V1 340 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 ELMOD3Q96FG2 381 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 LRRC46Q96FV0 321 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 TGFBR3LH3BV60 316 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 ALDOBP05062 364 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 ERP29P30040 261 aaKnown RBP12.62□□□□□ -0.39
TCOF1-207ENST00000504761 RAC1P63000 192 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 MC2RQ01718 297 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 GSG1LQ6UXU4 331 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 MRGPREQ86SM8 312 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 NKAIN3Q8N8D7 197 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 SLC35B4Q969S0 331 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 FOXB1Q99853 325 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 RDH8Q9NYR8 311 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 MTCL1Q9Y4B5 1905 aaKnown RBP12.62□□□□□ -0.39
TCOF1-207ENST00000504761 HOXB5P09067 269 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 ATF1P18846 271 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 GABRA2P47869 451 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 RBPJQ06330 500 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 MGAT2Q10469 447 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 DOC2BQ14184 412 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 DRAXINQ8NBI3 349 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-207ENST00000504761 CPNE4Q96A23 557 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-207ENST00000504761 PHB2Q99623 299 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 ZNF700Q9H0M5 742 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 BOLA1Q9Y3E2 137 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 K7ESF4 209 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 SC5DO75845 299 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 HRGP04196 525 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 MSL3P1P0C860 447 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 OR56B4Q8NH76 319 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 AKIP1Q9NQ31 210 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 ICAM5Q9UMF0 924 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 DNAH12Q6ZR08 3092 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 A0A0A6YYH2 397 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 A0A1W2PQD3 144 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 A6NJ64 397 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 I3L521 148 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 GPR176Q14439 515 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 SPATA46Q5T0L3 261 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 CADM3Q8N126 398 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 FNDC9Q8TBE3 224 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 HYLS1Q96M11 299 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 UFSP2Q9NUQ7 469 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 KCNN3Q9UGI6 736 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 UGT2A1Q9Y4X1 527 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 CUL9Q8IWT3 2517 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 IL2RAP01589 272 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 SEMG1P04279 462 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 GLI4P10075 376 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 CPT2P23786 658 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 SSTR2P30874 369 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 TAS2R20P59543 309 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 ZNF85Q03923 595 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 ZNF658BQ4V348 819 aaPredicted RBP12.61□□□□□ -0.39
TCOF1-207ENST00000504761 FHL5Q5TD97 284 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 C3P1Q6ZMU1 363 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 GPR155Q7Z3F1 870 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 TSEN54Q7Z6J9 526 aaKnown RBP12.61□□□□□ -0.39
TCOF1-207ENST00000504761 GLCCI1Q86VQ1 547 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 SEC22AQ96IW7 307 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 SYT3Q9BQG1 590 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 HINT2Q9BX68 163 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 METTL17Q9H7H0 456 aaPredicted RBP12.61□□□□□ -0.39
TCOF1-207ENST00000504761 AUNIPQ9H7T9 357 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 RAB22AQ9UL26 194 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 ETV7Q9Y603 341 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 FAM221AA4D161 298 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 PEX14O75381 377 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 PMP2P02689 132 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 CSF3P09919 207 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 MEF2DQ14814 521 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 GUCD1Q96NT3 240 aa12.61□□□□□ -0.39
TCOF1-207ENST00000504761 C7orf50Q9BRJ6 194 aaKnown RBP12.61□□□□□ -0.39
TCOF1-207ENST00000504761 EXOGQ9Y2C4 368 aaKnown RBP12.61□□□□□ -0.39
TCOF1-207ENST00000504761 TMEM82A0PJX8 343 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 CD53P19397 219 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 TAF9Q16594 264 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 STPG1Q5TH74 334 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 NOXA1Q86UR1 476 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 SGPP2Q8IWX5 399 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 CCDC36Q8IYA8 594 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 OR51S1Q8NGJ8 323 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 M1APQ8TC57 530 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 NUDCD2Q8WVJ2 157 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 SNAPC3Q92966 411 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 ZCCHC4Q9H5U6 513 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 HS3ST3B1Q9Y662 390 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 TRAV17A0A0B4J275 112 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 LIPT2A6NK58 231 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 PLPP2O43688 288 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 RP2O75695 350 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 ZIC2O95409 532 aaPredicted RBP12.6□□□□□ -0.39
TCOF1-207ENST00000504761 ALOX5APP20292 161 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 IL11P20809 199 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 SRD5A2P31213 254 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 PCK2Q16822 640 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 DCAF10Q5QP82 559 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 SULF2Q8IWU5 870 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 OR2AE1Q8NHA4 323 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms