RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 PPBPP02775 128 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 IGFBP3P17936 291 aaPredicted RBP4.37□□□□□ -1.71
NIPBL-204ENST00000504430 ANOS1P23352 680 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 CSRP3P50461 194 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 TFF2Q03403 129 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 ZNF726P1Q15940 193 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 ZNF672Q499Z4 452 aaPredicted RBP4.37□□□□□ -1.71
NIPBL-204ENST00000504430 OGFRL1Q5TC84 451 aaPredicted RBP4.37□□□□□ -1.71
NIPBL-204ENST00000504430 ATRAIDQ6UW56 229 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 CPNE9Q8IYJ1 553 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 LZICQ8WZA0 190 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 RTP4Q96DX8 246 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 URB1-AS1Q96HZ7 61 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 ZNF285Q96NJ3 590 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 PFDN5Q99471 154 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 KIR2DL4Q99706 377 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 PHF3Q92576 2039 aaKnown RBP4.37□□□□□ -1.71
NIPBL-204ENST00000504430 PLEKHH1Q9ULM0 1364 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 A0A1W2PR80 420 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 NCBP2LA6PVI3 153 aaKnown RBP4.37□□□□□ -1.71
NIPBL-204ENST00000504430 ERI3O43414 337 aaKnown RBP4.37□□□□□ -1.71
NIPBL-204ENST00000504430 EEDO75530 441 aaKnown RBP4.37□□□□□ -1.71
NIPBL-204ENST00000504430 LINC00614P0C842 121 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 GCLMP48507 274 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 RAB8AP61006 207 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 FOXF2Q12947 444 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 FAM27D1Q5T7N8 215 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 CPTPQ5TA50 214 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 TMEM42Q69YG0 159 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 GCNT7Q6ZNI0 430 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 GALNT10Q86SR1 603 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 ZNF491Q8N8L2 437 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 OR4C3Q8NH37 302 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 OR56B4Q8NH76 319 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 C8orf46Q8TAG6 207 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 MED8Q96G25 268 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 C2orf48Q96LS8 159 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 RILPQ96NA2 401 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 C12orf57Q99622 126 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 YTHDF1Q9BYJ9 559 aaKnown RBP4.37□□□□□ -1.71
NIPBL-204ENST00000504430 UBIAD1Q9Y5Z9 338 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 IGHV2-70DA0A0C4DH43 119 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 A0A1B0GTI1 187 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 MBTPS2O43462 519 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 ATP6V1B2P21281 511 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 GPD1P21695 349 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 CFPP27918 469 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 LOXP28300 417 aaPredicted RBP4.36□□□□□ -1.71
NIPBL-204ENST00000504430 RPL12P30050 165 aaKnown RBP4.36□□□□□ -1.71
NIPBL-204ENST00000504430 APOC4P55056 127 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 GP2P55259 537 aaKnown RBP4.36□□□□□ -1.71
NIPBL-204ENST00000504430 SLC25A11Q02978 314 aaKnown RBP4.36□□□□□ -1.71
NIPBL-204ENST00000504430 MAPK14Q16539 360 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 TUBB1Q9H4B7 451 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 MSL2Q9HCI7 577 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 POLD4Q9HCU8 107 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 TMEM138Q9NPI0 162 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 VNN3Q9NY84 501 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 SEC14L4Q9UDX3 406 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 FBXO5Q9UKT4 447 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 A0A087WUJ7 227 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 F6UB75 175 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 RAD51CO43502 376 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 SOX30O94993 753 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 SEC24AO95486 1093 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 KRT75O95678 551 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 APOC1P02654 83 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 HIST1H1CP16403 213 aaKnown RBP4.36□□□□□ -1.71
NIPBL-204ENST00000504430 STXBP1P61764 594 aaKnown RBP4.36□□□□□ -1.71
NIPBL-204ENST00000504430 SMAGPQ0VAQ4 97 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 ZNF155Q12901 538 aaPredicted RBP4.36□□□□□ -1.71
NIPBL-204ENST00000504430 POU2AF1Q16633 256 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 HAGHQ16775 308 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 HLA-DRB5Q30154 266 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 LHFPL3Q86UP9 236 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 SLC35F6Q8N357 371 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 PRSS33Q8NF86 280 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 HPSE2Q8WWQ2 592 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 ZMYND19Q96E35 227 aaPredicted RBP4.36□□□□□ -1.71
NIPBL-204ENST00000504430 SORCS2Q96PQ0 1159 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 FBXL15Q9H469 300 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 DDX31Q9H8H2 851 aaKnown RBP4.36□□□□□ -1.71
NIPBL-204ENST00000504430 TDRD15B5MCY1 1934 aaKnown RBP4.36□□□□□ -1.71
NIPBL-204ENST00000504430 EFCAB10A6NFE3 127 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 A6NIZ1 184 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 C8orf88P0DMB2 117 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 PYCR1P32322 319 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 PDLIM4P50479 330 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 ESRRGP62508 458 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 MRPS11P82912 194 aaKnown RBP4.36□□□□□ -1.71
NIPBL-204ENST00000504430 CALCRLQ16602 461 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 ARHGAP11BQ3KRB8 267 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 BHLHA9Q7RTU4 235 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 BPIFB2Q8N4F0 458 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 OR8G5Q8NG78 346 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 OR2Z1Q8NG97 314 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 OR6N1Q8NGY5 312 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 OR13G1Q8NGZ3 307 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 TAMM41Q96BW9 452 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 PDLIM2Q96JY6 352 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms