RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 CALM1P0DP23 149 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 CALM2P0DP24 149 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 CALM3P0DP25 149 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 ELK1P19419 428 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 RAB4AP20338 218 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 CNR1P21554 472 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 AK4P27144 223 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 HOXA6P31267 233 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 HOXA9P31269 272 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 MAS1LP35410 378 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 MAGEA2P43356 314 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 SUB1P53999 127 aaKnown RBP eCLIP1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 APOC4P55056 127 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 DSTNP60981 165 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 UBE2KP61086 200 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 MAGOHP61326 146 aaKnown RBP1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 TIMM10P62072 90 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 GNB2P62879 340 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 ZNF92Q03936 586 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 UNC119Q13432 240 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 SLC39A6Q13433 755 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 MED21Q13503 144 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 TFDP2Q14188 446 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 TAL2Q16559 108 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 NDUFAF6Q330K2 333 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 ZBED5Q49AG3 693 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 KLF17Q5JT82 389 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 CDKL4Q5MAI5 379 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 TPTE2P1Q5T6R2 138 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 UBE2UQ5VVX9 321 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 MFSD14CQ5VZR4 134 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 C11orf71Q6IPW1 123 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 CD300LGQ6UXG3 332 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 WDR82Q6UXN9 313 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 ABHD13Q7L211 337 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 LRRC6Q86X45 466 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 SLC7A5P1Q8MH63 180 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 PUSL1Q8N0Z8 303 aaKnown RBP1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 KIF2BQ8N4N8 673 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 CDRT4Q8N9R6 151 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 CCDC71LQ8N9Z2 235 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 ZNF738Q8NE65 137 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 OR2A1Q8NGT9 310 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 ZNF461Q8TAF7 563 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 DOK4Q8TEW6 326 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 C7orf33Q8WU49 177 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 CHCHD10Q8WYQ3 142 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 PIK3IP1Q96FE7 263 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 CHMP6Q96FZ7 201 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 DUS3LQ96G46 650 aaKnown RBP1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 SMIM10Q96HG1 83 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 DNAJC1Q96KC8 554 aaKnown RBP1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 IMMP1LQ96LU5 166 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 GPR21Q99679 349 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 CIB1Q99828 191 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 MICU1Q9BPX6 476 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 COPS4Q9BT78 406 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 DCUN1D5Q9BTE7 237 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 NAA50Q9GZZ1 169 aaKnown RBP1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 NXF3Q9H4D5 531 aaKnown RBP1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 MRM3Q9HC36 420 aaKnown RBP1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 C6orf50Q9HD87 102 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 SH2D2AQ9NP31 389 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 RHBDL2Q9NX52 303 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 USE1Q9NZ43 259 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 TREM2Q9NZC2 230 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 SHPKQ9UHJ6 478 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 CLEC2DQ9UHP7 191 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 NAGKQ9UJ70 344 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 SCML1Q9UN30 329 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 V9GY05 133 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 RAD50Q92878 1312 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 COL22A1Q8NFW1 1626 aaPredicted RBP1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 IGLV3-22A0A075B6J6 115 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 TRAV8-7A0A075B6U6 113 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 ZNF816-ZNF321PA0A0X1KG74 233 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 A6NIZ1 184 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 SMIM23A6NLE4 172 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 F6UB75 175 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 H0YHG0 523 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 CLDN34H7C241 214 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 H7C2Y5 167 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 K7EMT4 169 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 hCG_2039718K7EN88 272 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 DFFAO00273 331 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 ZW10O43264 779 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 B4GALT5O43286 388 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 HCRTR1O43613 425 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 SULT1B1O43704 296 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 TRAPPC6AO75865 159 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 HPRT1P00492 218 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 IGLV1-47P01700 117 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 HPNP05981 417 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 OR8U9P0C7N5 309 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 PET100P0DJ07 73 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 CSNK2A2P19784 350 aaPredicted RBP1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 RAB5AP20339 215 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 COX7A1P24310 79 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 TEAD1P28347 426 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 GLP1RP43220 463 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms