RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 RNF166Q96A37 237 aaPredicted RBP17.69■□□□□ 0.42
CDC42SE2-206ENST00000503291 CLEC18AA5D8T8 446 aa17.69■□□□□ 0.42
CDC42SE2-206ENST00000503291 M0R135 149 aa17.69■□□□□ 0.42
CDC42SE2-206ENST00000503291 PNPP00491 289 aa17.69■□□□□ 0.42
CDC42SE2-206ENST00000503291 LALBAP00709 142 aa17.69■□□□□ 0.42
CDC42SE2-206ENST00000503291 CX3CR1P49238 355 aa17.69■□□□□ 0.42
CDC42SE2-206ENST00000503291 GTF2A1P52655 376 aaPredicted RBP17.69■□□□□ 0.42
CDC42SE2-206ENST00000503291 GBX2P52951 348 aaPredicted RBP17.69■□□□□ 0.42
CDC42SE2-206ENST00000503291 TPTEP56180 551 aa17.69■□□□□ 0.42
CDC42SE2-206ENST00000503291 TBC1D28Q2M2D7 210 aa17.69■□□□□ 0.42
CDC42SE2-206ENST00000503291 C3orf36Q3SXR2 165 aa17.69■□□□□ 0.42
CDC42SE2-206ENST00000503291 CLEC18BQ6UXF7 455 aa17.69■□□□□ 0.42
CDC42SE2-206ENST00000503291 ZNF283Q8N7M2 679 aa17.69■□□□□ 0.42
CDC42SE2-206ENST00000503291 CLEC18CQ8NCF0 446 aa17.69■□□□□ 0.42
CDC42SE2-206ENST00000503291 ZNF799Q96GE5 643 aa17.69■□□□□ 0.42
CDC42SE2-206ENST00000503291 BRD7Q9NPI1 651 aa17.69■□□□□ 0.42
CDC42SE2-206ENST00000503291 GRIP1Q9Y3R0 1128 aa17.69■□□□□ 0.42
CDC42SE2-206ENST00000503291 TMEM269A0A1B0GVZ9 245 aa17.68■□□□□ 0.42
CDC42SE2-206ENST00000503291 ACSM4P0C7M7 580 aa17.68■□□□□ 0.42
CDC42SE2-206ENST00000503291 SLC6A9P48067 706 aa17.68■□□□□ 0.42
CDC42SE2-206ENST00000503291 HGFACQ04756 655 aa17.68■□□□□ 0.42
CDC42SE2-206ENST00000503291 NEDD8Q15843 81 aa17.68■□□□□ 0.42
CDC42SE2-206ENST00000503291 PAQR4Q8N4S7 273 aaPredicted RBP17.68■□□□□ 0.42
CDC42SE2-206ENST00000503291 SRSF10O75494 262 aaKnown RBP17.67■□□□□ 0.42
CDC42SE2-206ENST00000503291 SLC2A1P11166 492 aa17.67■□□□□ 0.42
CDC42SE2-206ENST00000503291 MMP16P51512 607 aa17.67■□□□□ 0.42
CDC42SE2-206ENST00000503291 ZNF121P58317 390 aaPredicted RBP17.67■□□□□ 0.42
CDC42SE2-206ENST00000503291 DRAM2Q6UX65 266 aa17.67■□□□□ 0.42
CDC42SE2-206ENST00000503291 OR1J2Q8NGS2 313 aa17.67■□□□□ 0.42
CDC42SE2-206ENST00000503291 DACH2Q96NX9 599 aa17.67■□□□□ 0.42
CDC42SE2-206ENST00000503291 DOK1Q99704 481 aa17.67■□□□□ 0.42
CDC42SE2-206ENST00000503291 MRPS26Q9BYN8 205 aaKnown RBP17.67■□□□□ 0.42
CDC42SE2-206ENST00000503291 NGBQ9NPG2 151 aa17.67■□□□□ 0.42
CDC42SE2-206ENST00000503291 R4GMQ9 66 aa17.67■□□□□ 0.42
CDC42SE2-206ENST00000503291 APOC1P02654 83 aa17.67■□□□□ 0.42
CDC42SE2-206ENST00000503291 HSMCR30P0CW71 290 aa17.67■□□□□ 0.42
CDC42SE2-206ENST00000503291 PSMA6P60900 246 aaKnown RBP17.67■□□□□ 0.42
CDC42SE2-206ENST00000503291 MFGE8Q08431 387 aaPredicted RBP17.67■□□□□ 0.42
CDC42SE2-206ENST00000503291 ZNF829Q3KNS6 432 aaPredicted RBP17.67■□□□□ 0.42
CDC42SE2-206ENST00000503291 UBE2UQ5VVX9 321 aa17.67■□□□□ 0.42
CDC42SE2-206ENST00000503291 IL17RDQ8NFM7 739 aa17.67■□□□□ 0.42
CDC42SE2-206ENST00000503291 MGLLQ99685 303 aa17.67■□□□□ 0.42
CDC42SE2-206ENST00000503291 CDH20Q9HBT6 801 aa17.67■□□□□ 0.42
CDC42SE2-206ENST00000503291 TRIM36Q9NQ86 728 aa17.67■□□□□ 0.42
CDC42SE2-206ENST00000503291 FAM206AQ9NX38 181 aa17.67■□□□□ 0.42
CDC42SE2-206ENST00000503291 N6AMT1Q9Y5N5 214 aa17.67■□□□□ 0.42
CDC42SE2-206ENST00000503291 KLF2Q9Y5W3 355 aaPredicted RBP17.67■□□□□ 0.42
CDC42SE2-206ENST00000503291 COL12A1Q99715 3063 aa17.67■□□□□ 0.42
CDC42SE2-206ENST00000503291 INMTO95050 263 aa17.66■□□□□ 0.42
CDC42SE2-206ENST00000503291 CLPTM1O96005 669 aa17.66■□□□□ 0.42
CDC42SE2-206ENST00000503291 ZNF35P13682 527 aa17.66■□□□□ 0.42
CDC42SE2-206ENST00000503291 PEX19P40855 299 aa17.66■□□□□ 0.42
CDC42SE2-206ENST00000503291 NAAAQ02083 359 aa17.66■□□□□ 0.42
CDC42SE2-206ENST00000503291 MRPL28Q13084 256 aaKnown RBP17.66■□□□□ 0.42
CDC42SE2-206ENST00000503291 ZNF367Q7RTV3 350 aa17.66■□□□□ 0.42
CDC42SE2-206ENST00000503291 PRSS45Q7RTY3 260 aa17.66■□□□□ 0.42
CDC42SE2-206ENST00000503291 ANKHD1Q8IWZ3 2542 aaKnown RBP17.66■□□□□ 0.42
CDC42SE2-206ENST00000503291 FCGR1BQ92637 280 aa17.66■□□□□ 0.42
CDC42SE2-206ENST00000503291 C4orf45Q96LM5 186 aa17.66■□□□□ 0.42
CDC42SE2-206ENST00000503291 DCLRE1CQ96SD1 692 aaKnown RBP17.66■□□□□ 0.42
CDC42SE2-206ENST00000503291 VCX3AQ9NNX9 186 aa17.66■□□□□ 0.42
CDC42SE2-206ENST00000503291 HEATR1Q9H583 2144 aaKnown RBP17.66■□□□□ 0.42
CDC42SE2-206ENST00000503291 LOC110117498-PIK3R3F6TDL0 507 aa17.65■□□□□ 0.42
CDC42SE2-206ENST00000503291 ANXA2P07355 339 aaKnown RBP17.65■□□□□ 0.42
CDC42SE2-206ENST00000503291 IGFBP2P18065 325 aa17.65■□□□□ 0.42
CDC42SE2-206ENST00000503291 CD40P25942 277 aa17.65■□□□□ 0.42
CDC42SE2-206ENST00000503291 KIR2DL3P43628 341 aa17.65■□□□□ 0.42
CDC42SE2-206ENST00000503291 NANOS3P60323 173 aaKnown RBP17.65■□□□□ 0.42
CDC42SE2-206ENST00000503291 ACSM1Q08AH1 577 aa17.65■□□□□ 0.42
CDC42SE2-206ENST00000503291 TMEM108Q6UXF1 575 aa17.65■□□□□ 0.42
CDC42SE2-206ENST00000503291 ZFP41Q8N8Y5 198 aa17.65■□□□□ 0.42
CDC42SE2-206ENST00000503291 OR2G2Q8NGZ5 317 aa17.65■□□□□ 0.42
CDC42SE2-206ENST00000503291 HAVCR2Q8TDQ0 301 aa17.65■□□□□ 0.42
CDC42SE2-206ENST00000503291 PPP1R14AQ96A00 147 aa17.65■□□□□ 0.42
CDC42SE2-206ENST00000503291 COG8Q96MW5 612 aa17.65■□□□□ 0.42
CDC42SE2-206ENST00000503291 CRIM1Q9NZV1 1036 aa17.65■□□□□ 0.42
CDC42SE2-206ENST00000503291 FRRS1LQ9P0K9 344 aa17.65■□□□□ 0.42
CDC42SE2-206ENST00000503291 GTF2A1LQ9UNN4 478 aa17.65■□□□□ 0.42
CDC42SE2-206ENST00000503291 SIRT4Q9Y6E7 314 aaPredicted RBP17.65■□□□□ 0.42
CDC42SE2-206ENST00000503291 TENM4Q6N022 2769 aa17.65■□□□□ 0.42
CDC42SE2-206ENST00000503291 DPRXA6NFQ7 191 aa17.65■□□□□ 0.42
CDC42SE2-206ENST00000503291 LCATP04180 440 aa17.65■□□□□ 0.42
CDC42SE2-206ENST00000503291 TGM4P49221 684 aa17.65■□□□□ 0.42
CDC42SE2-206ENST00000503291 CCDC58Q4VC31 144 aa17.65■□□□□ 0.42
CDC42SE2-206ENST00000503291 FDX2Q6P4F2 183 aa17.65■□□□□ 0.42
CDC42SE2-206ENST00000503291 FAM57BQ71RH2 274 aa17.65■□□□□ 0.42
CDC42SE2-206ENST00000503291 PRSS35Q8N3Z0 413 aa17.65■□□□□ 0.42
CDC42SE2-206ENST00000503291 OR52A1Q9UKL2 312 aa17.65■□□□□ 0.42
CDC42SE2-206ENST00000503291 LRRK2Q5S007 2527 aa17.65■□□□□ 0.42
CDC42SE2-206ENST00000503291 IGHV2OR16-5A0A0B4J2B6 119 aa17.64■□□□□ 0.41
CDC42SE2-206ENST00000503291 CASKO14936 926 aa17.64■□□□□ 0.41
CDC42SE2-206ENST00000503291 CRYAAP02489 173 aa17.64■□□□□ 0.41
CDC42SE2-206ENST00000503291 EPXP11678 715 aa17.64■□□□□ 0.41
CDC42SE2-206ENST00000503291 ANOS1P23352 680 aa17.64■□□□□ 0.41
CDC42SE2-206ENST00000503291 PTAFRP25105 342 aa17.64■□□□□ 0.41
CDC42SE2-206ENST00000503291 CALCRP30988 508 aa17.64■□□□□ 0.41
CDC42SE2-206ENST00000503291 WNT5AP41221 380 aa17.64■□□□□ 0.41
CDC42SE2-206ENST00000503291 TIGD6Q17RP2 521 aa17.64■□□□□ 0.41
CDC42SE2-206ENST00000503291 RPL22L1Q6P5R6 122 aaKnown RBP17.64■□□□□ 0.41
CDC42SE2-206ENST00000503291 COLCA1Q6ZS62 124 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms