RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 FOXJ3Q9UPW0 622 aa9.63□□□□□ -0.87
CDK9-205ENST00000498339 MED31Q9Y3C7 131 aa9.63□□□□□ -0.87
CDK9-205ENST00000498339 USH1CQ9Y6N9 552 aa9.63□□□□□ -0.87
CDK9-205ENST00000498339 A0A1W2PRD5 423 aa9.62□□□□□ -0.87
CDK9-205ENST00000498339 A0A1W2PRF3 423 aa9.62□□□□□ -0.87
CDK9-205ENST00000498339 A0A1W2PRM7 423 aa9.62□□□□□ -0.87
CDK9-205ENST00000498339 IQCF6A8MYZ5 107 aa9.62□□□□□ -0.87
CDK9-205ENST00000498339 POLR3GO15318 223 aaPredicted RBP9.62□□□□□ -0.87
CDK9-205ENST00000498339 GPR37O15354 613 aa9.62□□□□□ -0.87
CDK9-205ENST00000498339 XPNPEP2O43895 674 aa9.62□□□□□ -0.87
CDK9-205ENST00000498339 OR10H3O60404 316 aa9.62□□□□□ -0.87
CDK9-205ENST00000498339 SHOX2O60902 331 aaPredicted RBP9.62□□□□□ -0.87
CDK9-205ENST00000498339 MPIG6BO95866 241 aa9.62□□□□□ -0.87
CDK9-205ENST00000498339 RAD23AP54725 363 aa9.62□□□□□ -0.87
CDK9-205ENST00000498339 MTPNP58546 118 aa9.62□□□□□ -0.87
CDK9-205ENST00000498339 NSUN5P1Q3KNT7 163 aa9.62□□□□□ -0.87
CDK9-205ENST00000498339 SLC35E4Q6ICL7 350 aa9.62□□□□□ -0.87
CDK9-205ENST00000498339 C11orf87Q6NUJ2 197 aa9.62□□□□□ -0.87
CDK9-205ENST00000498339 BLOC1S3Q6QNY0 202 aa9.62□□□□□ -0.87
CDK9-205ENST00000498339 PATL1Q86TB9 770 aaKnown RBP9.62□□□□□ -0.87
CDK9-205ENST00000498339 LYG1Q8N1E2 194 aa9.62□□□□□ -0.87
CDK9-205ENST00000498339 PIP4P2Q8N4L2 257 aa9.62□□□□□ -0.87
CDK9-205ENST00000498339 PCYOX1LQ8NBM8 494 aa9.62□□□□□ -0.87
CDK9-205ENST00000498339 OR4S1Q8NGB4 309 aa9.62□□□□□ -0.87
CDK9-205ENST00000498339 OR1F12Q8NHA8 337 aa9.62□□□□□ -0.87
CDK9-205ENST00000498339 AENQ8WTP8 325 aaKnown RBP9.62□□□□□ -0.87
CDK9-205ENST00000498339 RASSF5Q8WWW0 418 aa9.62□□□□□ -0.87
CDK9-205ENST00000498339 ST8SIA4Q92187 359 aa9.62□□□□□ -0.87
CDK9-205ENST00000498339 APOBEC3DQ96AK3 386 aaPredicted RBP9.62□□□□□ -0.87
CDK9-205ENST00000498339 TAMM41Q96BW9 452 aa9.62□□□□□ -0.87
CDK9-205ENST00000498339 ECSITQ9BQ95 431 aa9.62□□□□□ -0.87
CDK9-205ENST00000498339 TMEM109Q9BVC6 243 aa9.62□□□□□ -0.87
CDK9-205ENST00000498339 DNAJB11Q9UBS4 358 aa9.62□□□□□ -0.87
CDK9-205ENST00000498339 HIF3AQ9Y2N7 669 aa9.62□□□□□ -0.87
CDK9-205ENST00000498339 SIGLEC9Q9Y336 463 aa9.62□□□□□ -0.87
CDK9-205ENST00000498339 SH3GLB1Q9Y371 365 aa9.62□□□□□ -0.87
CDK9-205ENST00000498339 TRAV27A0A087WT01 109 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 TRBV5-3A0A0A0MS03 114 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 A0A1B0GVI7 797 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 OR6C6A6NF89 314 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 J3QW42 95 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 XKRYO14609 159 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 GYPAP02724 150 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 VSIG10L2P0DP72 767 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 IFI30P13284 250 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 TNFRSF1BP20333 461 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 EEF1B2P24534 225 aaKnown RBP9.61□□□□□ -0.87
CDK9-205ENST00000498339 GATA4P43694 442 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 COX10Q12887 443 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 OR8G1Q15617 311 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 MPPED2Q15777 294 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 AGKQ53H12 422 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 CLEC12AQ5QGZ9 265 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 BEND6Q5SZJ8 279 aaPredicted RBP9.61□□□□□ -0.87
CDK9-205ENST00000498339 C1orf122Q6ZSJ8 110 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 BTN2A1Q7KYR7 527 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.61□□□□□ -0.87
CDK9-205ENST00000498339 DHDDSQ86SQ9 333 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 FUNDC1Q8IVP5 155 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 KLHDC1Q8N7A1 406 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 SPERTQ8NA61 448 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 OR4C13Q8NGP0 309 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 OR51A7Q8NH64 312 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 OR5R1Q8NH85 324 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 Q8TCH9 128 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 ERGIC1Q969X5 290 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 PHF21AQ96BD5 680 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 ZNF583Q96ND8 569 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 FN3KRPQ9HA64 309 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 TRIM36Q9NQ86 728 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 SIRT7Q9NRC8 400 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 RNF7Q9UBF6 113 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 RIMS3Q9UJD0 308 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 GMEB1Q9Y692 573 aa9.61□□□□□ -0.87
CDK9-205ENST00000498339 TRAV38-1A0A0B4J264 116 aa9.6□□□□□ -0.87
CDK9-205ENST00000498339 hCG_1807616A0A1W2PRN6 198 aa9.6□□□□□ -0.87
CDK9-205ENST00000498339 OOEPA6NGQ2 149 aa9.6□□□□□ -0.87
CDK9-205ENST00000498339 LGALS8O00214 317 aa9.6□□□□□ -0.87
CDK9-205ENST00000498339 OR5F1O95221 314 aa9.6□□□□□ -0.87
CDK9-205ENST00000498339 IGF2P01344 180 aa9.6□□□□□ -0.87
CDK9-205ENST00000498339 TSPAN19P0C672 248 aa9.6□□□□□ -0.87
CDK9-205ENST00000498339 RPL4P36578 427 aaKnown RBP9.6□□□□□ -0.87
CDK9-205ENST00000498339 GUCA2AQ02747 115 aa9.6□□□□□ -0.87
CDK9-205ENST00000498339 PRB3Q04118 309 aaPredicted RBP9.6□□□□□ -0.87
CDK9-205ENST00000498339 MAB21L1Q13394 359 aa9.6□□□□□ -0.87
CDK9-205ENST00000498339 PIN1Q13526 163 aaPredicted RBP9.6□□□□□ -0.87
CDK9-205ENST00000498339 CDONQ4KMG0 1287 aa9.6□□□□□ -0.87
CDK9-205ENST00000498339 OR2T6Q8NHC8 308 aa9.6□□□□□ -0.87
CDK9-205ENST00000498339 LIPHQ8WWY8 451 aa9.6□□□□□ -0.87
CDK9-205ENST00000498339 BPIFA2Q96DR5 249 aa9.6□□□□□ -0.87
CDK9-205ENST00000498339 CLPTM1LQ96KA5 538 aa9.6□□□□□ -0.87
CDK9-205ENST00000498339 GRHPRQ9UBQ7 328 aa9.6□□□□□ -0.87
CDK9-205ENST00000498339 FBLN5Q9UBX5 448 aa9.6□□□□□ -0.87
CDK9-205ENST00000498339 COL7A1Q02388 2944 aa9.59□□□□□ -0.87
CDK9-205ENST00000498339 TEX13CA0A0J9YWL9 993 aa9.59□□□□□ -0.87
CDK9-205ENST00000498339 TMEM120BA0PK00 339 aa9.59□□□□□ -0.87
CDK9-205ENST00000498339 A6NLC8 198 aa9.59□□□□□ -0.87
CDK9-205ENST00000498339 DVL1O14640 695 aa9.59□□□□□ -0.87
CDK9-205ENST00000498339 NPFFO15130 113 aa9.59□□□□□ -0.87
CDK9-205ENST00000498339 RER1O15258 196 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms