RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 M0QYT0 321 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 DNASE2O00115 360 aaPredicted RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 LIN7AO14910 233 aaPredicted RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 AREL1O15033 823 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 OR2J2O76002 312 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 CD36P16671 472 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 GPR183P32249 361 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 COILP38432 576 aaPredicted RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 EIF3BP55884 814 aaKnown RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 NDUFV3P56181 108 aaKnown RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 MAXP61244 160 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 HBG2P69892 147 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 ROM1Q03395 351 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 ZNF85Q03923 595 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 LMAN2Q12907 356 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 SNTB1Q13884 538 aaKnown RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 PON2Q15165 354 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 HIST3H3Q16695 136 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 MRGPRG-AS1Q2M3A8 158 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 UTF1Q5T230 341 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 CGB2Q6NT52 195 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 FAAP20Q6NZ36 180 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 ANKRD37Q7Z713 158 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 SLC25A44Q96H78 314 aaPredicted RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 ZNF559Q9BR84 538 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 TIPINQ9BVW5 301 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 CADM1Q9BY67 442 aaKnown RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 WNT8AQ9H1J5 351 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 CXorf36Q9H7Y0 433 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 METTL7AQ9H8H3 244 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 DIABLOQ9NR28 239 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 GDE1Q9NZC3 331 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 HCN3Q9P1Z3 774 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 PUS1Q9Y606 427 aaKnown RBP eCLIP1.23□□□□□ -2.21
XRN1-214ENST00000498077 SOX21Q9Y651 276 aaPredicted RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 U3KQE9 123 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 KDRP35968 1356 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 MALRD1Q5VYJ5 2156 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 MYOCOSA0A1B0GUC4 107 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 A0A1W2PQH9 124 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 A0A1W2PR48 441 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 WI2-2373I1.2A0A1W2PRP0 233 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 DHRS12A0PJE2 317 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 A1L4Q6 167 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 C7orf77A4D0Y5 90 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 TRAPPC13A5PLN9 417 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 OR5B21A6NL26 309 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 RBFOX2O43251 390 aaKnown RBP eCLIP1.22□□□□□ -2.21
XRN1-214ENST00000498077 RAD51CO43502 376 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 ETHE1O95571 254 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 IFNB1P01574 187 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 JCHAINP01591 159 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 IGLV6-57P01721 117 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 BGLAPP02818 100 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 CYC1P08574 325 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 ASAH2BP0C7U1 165 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 SPP1P10451 314 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 CLUP10909 449 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 ERGP11308 486 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 AKR1C4P17516 323 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 IGFBP3P17936 291 aaPredicted RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 TBXA2RP21731 343 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 S100A1P23297 94 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 STOMP27105 288 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 APEX1P27695 318 aaKnown RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 PSMB6P28072 239 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 SERPINB1P30740 379 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 GPR3P46089 330 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 PSMD8P48556 350 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 CENPAP49450 140 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 SERPINB9P50453 376 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 PLK1P53350 603 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 MVDP53602 400 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 APOC4P55056 127 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 CASP7P55210 303 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 HNRNPKP61978 463 aaKnown RBP eCLIP1.22□□□□□ -2.21
XRN1-214ENST00000498077 MEF2CQ06413 473 aaPredicted RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 IL11RAQ14626 422 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 RAB39AQ14964 217 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 OPCMLQ14982 345 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 MFSD14CQ5VZR4 134 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 AMMECR1LQ6DCA0 310 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 CLEC6AQ6EIG7 209 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 SPAG11AQ6PDA7 123 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 CYP20A1Q6UW02 462 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 GPRIN3Q6ZVF9 776 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 UBE3DQ7Z6J8 389 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 S100A7AQ86SG5 101 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 SCD5Q86SK9 330 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 MRPL52Q86TS9 123 aaKnown RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 RALGPS2Q86X27 583 aaPredicted RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 ADGRG3Q86Y34 549 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 TBC1D10CQ8IV04 446 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 ARHGEF39Q8N4T4 335 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 PLPP5Q8NEB5 264 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 SDR9C7Q8NEX9 313 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 PROKR2Q8NFJ6 384 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 OR5M1Q8NGP8 315 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 KLF14Q8TD94 323 aaPredicted RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 NRG4Q8WWG1 115 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms