RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 FABP6P51161 128 aa10.26□□□□□ -0.77
CUX1-210ENST00000497815 KRTAP10-9P60411 292 aa10.26□□□□□ -0.77
CUX1-210ENST00000497815 MVKQ03426 396 aa10.26□□□□□ -0.77
CUX1-210ENST00000497815 EGR3Q06889 387 aa10.26□□□□□ -0.77
CUX1-210ENST00000497815 KRTAP27-1Q3LI81 207 aa10.26□□□□□ -0.77
CUX1-210ENST00000497815 TP53I3Q53FA7 332 aa10.26□□□□□ -0.77
CUX1-210ENST00000497815 LHFPL3Q86UP9 236 aa10.26□□□□□ -0.77
CUX1-210ENST00000497815 ZNF679Q8IYX0 411 aa10.26□□□□□ -0.77
CUX1-210ENST00000497815 STX19Q8N4C7 294 aa10.26□□□□□ -0.77
CUX1-210ENST00000497815 YIPF7Q8N8F6 280 aa10.26□□□□□ -0.77
CUX1-210ENST00000497815 ZNF540Q8NDQ6 660 aa10.26□□□□□ -0.77
CUX1-210ENST00000497815 NUP37Q8NFH4 326 aa10.26□□□□□ -0.77
CUX1-210ENST00000497815 TMEM80Q96HE8 168 aa10.26□□□□□ -0.77
CUX1-210ENST00000497815 DCLRE1CQ96SD1 692 aaKnown RBP10.26□□□□□ -0.77
CUX1-210ENST00000497815 POFUT1Q9H488 388 aa10.26□□□□□ -0.77
CUX1-210ENST00000497815 CA10Q9NS85 328 aa10.26□□□□□ -0.77
CUX1-210ENST00000497815 PLCXD1Q9NUJ7 323 aa10.26□□□□□ -0.77
CUX1-210ENST00000497815 MRPS18AQ9NVS2 196 aaKnown RBP10.26□□□□□ -0.77
CUX1-210ENST00000497815 SCN3BQ9NY72 215 aa10.26□□□□□ -0.77
CUX1-210ENST00000497815 UBAP1Q9NZ09 502 aa10.26□□□□□ -0.77
CUX1-210ENST00000497815 PTTG3PQ9NZH4 202 aa10.26□□□□□ -0.77
CUX1-210ENST00000497815 MRM2Q9UI43 246 aaKnown RBP10.26□□□□□ -0.77
CUX1-210ENST00000497815 PSORS1C1Q9UIG5 152 aa10.26□□□□□ -0.77
CUX1-210ENST00000497815 GNG8Q9UK08 70 aa10.26□□□□□ -0.77
CUX1-210ENST00000497815 GTF2A1LQ9UNN4 478 aa10.26□□□□□ -0.77
CUX1-210ENST00000497815 ANKHD1Q8IWZ3 2542 aaKnown RBP10.25□□□□□ -0.77
CUX1-210ENST00000497815 C5orf63A6NC05 138 aa10.25□□□□□ -0.77
CUX1-210ENST00000497815 EFCAB10A6NFE3 127 aa10.25□□□□□ -0.77
CUX1-210ENST00000497815 TBX1O43435 398 aa10.25□□□□□ -0.77
CUX1-210ENST00000497815 IGHA1P01876 353 aa10.25□□□□□ -0.77
CUX1-210ENST00000497815 OR4A8P0C604 315 aa10.25□□□□□ -0.77
CUX1-210ENST00000497815 ANOS1P23352 680 aa10.25□□□□□ -0.77
CUX1-210ENST00000497815 PCSK6P29122 969 aa10.25□□□□□ -0.77
CUX1-210ENST00000497815 RIDAP52758 137 aaKnown RBP10.25□□□□□ -0.77
CUX1-210ENST00000497815 ZNF121P58317 390 aaPredicted RBP10.25□□□□□ -0.77
CUX1-210ENST00000497815 PPP1CBP62140 327 aa10.25□□□□□ -0.77
CUX1-210ENST00000497815 NKX6-1P78426 367 aaPredicted RBP10.25□□□□□ -0.77
CUX1-210ENST00000497815 ROM1Q03395 351 aa10.25□□□□□ -0.77
CUX1-210ENST00000497815 ST3GAL4Q11206 333 aa10.25□□□□□ -0.77
CUX1-210ENST00000497815 MED21Q13503 144 aa10.25□□□□□ -0.77
CUX1-210ENST00000497815 DRAM2Q6UX65 266 aa10.25□□□□□ -0.77
CUX1-210ENST00000497815 UNQ6126/PRO20091Q6UXV3 157 aa10.25□□□□□ -0.77
CUX1-210ENST00000497815 FAM57BQ71RH2 274 aa10.25□□□□□ -0.77
CUX1-210ENST00000497815 RHOUQ7L0Q8 258 aa10.25□□□□□ -0.77
CUX1-210ENST00000497815 FAM220AQ7Z4H9 259 aa10.25□□□□□ -0.77
CUX1-210ENST00000497815 SLC25A40Q8TBP6 338 aa10.25□□□□□ -0.77
CUX1-210ENST00000497815 SGCDQ92629 289 aa10.25□□□□□ -0.77
CUX1-210ENST00000497815 NRGNQ92686 78 aa10.25□□□□□ -0.77
CUX1-210ENST00000497815 FBXW5Q969U6 566 aa10.25□□□□□ -0.77
CUX1-210ENST00000497815 APOBEC3DQ96AK3 386 aaPredicted RBP10.25□□□□□ -0.77
CUX1-210ENST00000497815 DOK1Q99704 481 aa10.25□□□□□ -0.77
CUX1-210ENST00000497815 DHRS9Q9BPW9 319 aa10.25□□□□□ -0.77
CUX1-210ENST00000497815 ALG8Q9BVK2 526 aa10.25□□□□□ -0.77
CUX1-210ENST00000497815 BCL2L14Q9BZR8 327 aa10.25□□□□□ -0.77
CUX1-210ENST00000497815 PLEKHF2Q9H8W4 249 aa10.25□□□□□ -0.77
CUX1-210ENST00000497815 FGF20Q9NP95 211 aaPredicted RBP10.25□□□□□ -0.77
CUX1-210ENST00000497815 TBCCD1Q9NVR7 557 aa10.25□□□□□ -0.77
CUX1-210ENST00000497815 ERVK13-1Q9NX77 482 aa10.25□□□□□ -0.77
CUX1-210ENST00000497815 STARD10Q9Y365 291 aa10.25□□□□□ -0.77
CUX1-210ENST00000497815 SPTAN1Q13813 2472 aaKnown RBP10.25□□□□□ -0.77
CUX1-210ENST00000497815 PRR14LQ5THK1 2151 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 METTL15A6NJ78 407 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 J3QLW9 94 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 ZNF254O75437 659 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 APOC1P02654 83 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 PIPP12273 146 aaPredicted RBP10.24□□□□□ -0.77
CUX1-210ENST00000497815 ZNF19P17023 458 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 MYL12AP19105 171 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 DCKP27707 260 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 OTX1P32242 354 aaPredicted RBP10.24□□□□□ -0.77
CUX1-210ENST00000497815 GLRXP35754 106 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 PSMB10P40306 273 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 RGS6P49758 472 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 ETV1P50549 477 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 PRSS12P56730 875 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 OR12D2P58182 307 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 PSMA6P60900 246 aaKnown RBP10.24□□□□□ -0.77
CUX1-210ENST00000497815 RPS23P62266 143 aaKnown RBP10.24□□□□□ -0.77
CUX1-210ENST00000497815 CSNK2BP67870 215 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 MFGE8Q08431 387 aaPredicted RBP10.24□□□□□ -0.77
CUX1-210ENST00000497815 ADIPOQQ15848 244 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 MSMPQ1L6U9 139 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 GFOD2Q3B7J2 385 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 SNAI3Q3KNW1 292 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 ZNF684Q5T5D7 378 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 RGS7BPQ6MZT1 257 aaPredicted RBP10.24□□□□□ -0.77
CUX1-210ENST00000497815 DEGS2Q6QHC5 323 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 FBXL14Q8N1E6 418 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 TMEM171Q8WVE6 324 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 PGAM5Q96HS1 289 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 SYT3Q9BQG1 590 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 C1QTNF5Q9BXJ0 243 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 OR2J1Q9GZK6 312 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 LIME1Q9H400 295 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 NIPAL2Q9H841 368 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 ISG20L2Q9H9L3 353 aaKnown RBP10.24□□□□□ -0.77
CUX1-210ENST00000497815 INPP5EQ9NRR6 644 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 ACOXLQ9NUZ1 547 aa10.24□□□□□ -0.77
CUX1-210ENST00000497815 PAK1IP1Q9NWT1 392 aaPredicted RBP10.24□□□□□ -0.77
CUX1-210ENST00000497815 CNOT2Q9NZN8 540 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms