RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 MARCH3Q86UD3 253 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 ZNF764Q96H86 408 aaPredicted RBP11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 SOX7Q9BT81 388 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 CREBZFQ9NS37 354 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 TMEM74BQ9NUR3 256 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 DNAJB11Q9UBS4 358 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 FBXL17Q9UF56 701 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 C11orf98E9PRG8 122 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 HOXA2O43364 376 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 SOD2P04179 222 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 GNALP38405 381 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 GRK6P43250 576 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 TCEAL5Q5H9L2 206 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 PLPP4Q5VZY2 271 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 PRSS54Q6PEW0 395 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 DPY19L2P2Q6ZN68 376 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 ZNF610Q8N9Z0 462 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 MRGPRFQ96AM1 343 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 THOC3Q96J01 351 aaKnown RBP11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 HHIPL1Q96JK4 782 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 ZNF587Q96SQ5 575 aaPredicted RBP11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 G6PC3Q9BUM1 346 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 PDE7BQ9NP56 450 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 ZNF587BE7ETH6 402 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 ADH1CP00326 375 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 SERPINA2P20848 420 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 RPS23P62266 143 aaKnown RBP11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 LSM6P62312 80 aaKnown RBP11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 PLAURQ03405 335 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 FAM53BQ14153 422 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 TEX30Q5JUR7 227 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 ADGRE4PQ86SQ3 457 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 SFTPA1Q8IWL2 248 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 BSCL2Q96G97 398 aaPredicted RBP11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 C4orf45Q96LM5 186 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 TAAR9Q96RI9 348 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 CNTNAP3Q9BZ76 1288 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 PLA2G2EQ9NZK7 142 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 PRUNE2Q8WUY3 3088 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 TRBV5-7A0A0A0MS05 114 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 K7EPK0 472 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 CYB5BO43169 146 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 SOD3P08294 240 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 MDKP21741 143 aaPredicted RBP11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 ARRB1P49407 418 aaPredicted RBP11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 SULT1A2P50226 295 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 PKIAP61925 76 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 SRSF4Q08170 494 aaKnown RBP11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 SOHLH1Q5JUK2 328 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 AWAT2Q6E213 333 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 TMEM225Q6GV28 225 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 OR2T2Q6IF00 324 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 SLC43A2Q8N370 569 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 FAM71E2Q8N5Q1 922 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 HSD17B11Q8NBQ5 300 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 SLC5A7Q9GZV3 580 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 EPHX3Q9H6B9 360 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 MPDZO75970 2070 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 SNRNP200O75643 2136 aaKnown RBP11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 RAMP1O60894 148 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 PAX6P26367 422 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 FCGR2CP31995 323 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 CX3CR1P49238 355 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 DEFB103AP81534 67 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 GPR18Q14330 331 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 HMGN3Q15651 99 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 TOMM34Q15785 309 aaPredicted RBP11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 APCDD1LQ8NCL9 501 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 SMARCD2Q92925 531 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 IRF7Q92985 503 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 TCTN2Q96GX1 697 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 CYYR1Q96J86 154 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 TOX2Q96NM4 488 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 DCBLD2Q96PD2 775 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 TRIM2Q9C040 744 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 GRHPRQ9UBQ7 328 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 MRPS23Q9Y3D9 190 aaKnown RBP11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 SP3Q02447 781 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 ARHGAP19Q14CB8 494 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 SLC35D3Q5M8T2 416 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 GKN2Q86XP6 184 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 SUMF2Q8NBJ7 301 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 OR4K15Q8NH41 348 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 NUDT9Q9BW91 350 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 NELFAQ9H3P2 528 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 SLC2A8Q9NY64 477 aa11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 RCL1Q9Y2P8 373 aaKnown RBP11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 YBX2Q9Y2T7 364 aaKnown RBP11.73□□□□□ -0.53
GAPVD1-220ENST00000497580 FRMPD3Q5JV73 1810 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 A0A0A6YYH2 397 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 A6NJ64 397 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 TRGC2P03986 189 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 CSTBP04080 98 aaKnown RBP11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 CD37P11049 281 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 RNH1P13489 461 aaKnown RBP11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 CSRP1P21291 193 aaKnown RBP11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 TLX1P31314 330 aaPredicted RBP11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 TAGLN2P37802 199 aaKnown RBP11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 RAB28P51157 221 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms