RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 KCNJ15Q99712 375 aa17.31■□□□□ 0.36
CTSD-206ENST00000497544 MROQ9BYG7 248 aa17.31■□□□□ 0.36
CTSD-206ENST00000497544 ELOVL3Q9HB03 270 aa17.31■□□□□ 0.36
CTSD-206ENST00000497544 PLCXD1Q9NUJ7 323 aa17.31■□□□□ 0.36
CTSD-206ENST00000497544 SCN3BQ9NY72 215 aa17.31■□□□□ 0.36
CTSD-206ENST00000497544 IKZF2Q9UKS7 526 aa17.31■□□□□ 0.36
CTSD-206ENST00000497544 NBEAL1Q6ZS30 2694 aa17.31■□□□□ 0.36
CTSD-206ENST00000497544 JMJD1CQ15652 2540 aa17.3■□□□□ 0.36
CTSD-206ENST00000497544 ROS1P08922 2347 aa17.3■□□□□ 0.36
CTSD-206ENST00000497544 FLNAP21333 2647 aaKnown RBP17.3■□□□□ 0.36
CTSD-206ENST00000497544 A0A1W2PQL4 384 aaPredicted RBP17.3■□□□□ 0.36
CTSD-206ENST00000497544 DAPL1A0PJW8 107 aa17.3■□□□□ 0.36
CTSD-206ENST00000497544 EFCAB10A6NFE3 127 aa17.3■□□□□ 0.36
CTSD-206ENST00000497544 KIAA1324LA8MWY0 1029 aaPredicted RBP17.3■□□□□ 0.36
CTSD-206ENST00000497544 VSTM5A8MXK1 200 aa17.3■□□□□ 0.36
CTSD-206ENST00000497544 SHISA9B4DS77 424 aa17.3■□□□□ 0.36
CTSD-206ENST00000497544 XPNPEP2O43895 674 aa17.3■□□□□ 0.36
CTSD-206ENST00000497544 NR4A1P22736 598 aa17.3■□□□□ 0.36
CTSD-206ENST00000497544 PCSK6P29122 969 aa17.3■□□□□ 0.36
CTSD-206ENST00000497544 PRKXP51817 358 aa17.3■□□□□ 0.36
CTSD-206ENST00000497544 HGFACQ04756 655 aa17.3■□□□□ 0.36
CTSD-206ENST00000497544 LAIR2Q6ISS4 152 aa17.3■□□□□ 0.36
CTSD-206ENST00000497544 DEGS2Q6QHC5 323 aa17.3■□□□□ 0.36
CTSD-206ENST00000497544 PAQR4Q8N4S7 273 aaPredicted RBP17.3■□□□□ 0.36
CTSD-206ENST00000497544 ZNF283Q8N7M2 679 aa17.3■□□□□ 0.36
CTSD-206ENST00000497544 OR52I1Q8NGK6 324 aa17.3■□□□□ 0.36
CTSD-206ENST00000497544 GGHQ92820 318 aa17.3■□□□□ 0.36
CTSD-206ENST00000497544 MYCBPQ99417 103 aaPredicted RBP17.3■□□□□ 0.36
CTSD-206ENST00000497544 TTTY10Q9BZA0 68 aa17.3■□□□□ 0.36
CTSD-206ENST00000497544 CLEC4MQ9H2X3 399 aaPredicted RBP17.3■□□□□ 0.36
CTSD-206ENST00000497544 OR51B6Q9H340 312 aa17.3■□□□□ 0.36
CTSD-206ENST00000497544 PSMD9O00233 223 aa17.29■□□□□ 0.36
CTSD-206ENST00000497544 ABHD16AO95870 558 aa17.29■□□□□ 0.36
CTSD-206ENST00000497544 APOC1P02654 83 aa17.29■□□□□ 0.36
CTSD-206ENST00000497544 FAM157BP0CG42 384 aa17.29■□□□□ 0.36
CTSD-206ENST00000497544 DCKP27707 260 aa17.29■□□□□ 0.36
CTSD-206ENST00000497544 OPRL1P41146 370 aa17.29■□□□□ 0.36
CTSD-206ENST00000497544 SLC6A9P48067 706 aa17.29■□□□□ 0.36
CTSD-206ENST00000497544 UCP2P55851 309 aa17.29■□□□□ 0.36
CTSD-206ENST00000497544 EGR3Q06889 387 aa17.29■□□□□ 0.36
CTSD-206ENST00000497544 MED21Q13503 144 aa17.29■□□□□ 0.36
CTSD-206ENST00000497544 RSPO1Q2MKA7 263 aaPredicted RBP17.29■□□□□ 0.36
CTSD-206ENST00000497544 LRRN1Q6UXK5 716 aa17.29■□□□□ 0.36
CTSD-206ENST00000497544 ZNF679Q8IYX0 411 aa17.29■□□□□ 0.36
CTSD-206ENST00000497544 ZNF540Q8NDQ6 660 aa17.29■□□□□ 0.36
CTSD-206ENST00000497544 AKAP1Q92667 903 aaKnown RBP eCLIP17.29■□□□□ 0.361e-12■■■□□ 15.3
CTSD-206ENST00000497544 MRPL48Q96GC5 212 aaKnown RBP17.29■□□□□ 0.36
CTSD-206ENST00000497544 OR8B4Q96RC9 309 aa17.29■□□□□ 0.36
CTSD-206ENST00000497544 BCL2L14Q9BZR8 327 aa17.29■□□□□ 0.36
CTSD-206ENST00000497544 NIPAL2Q9H841 368 aa17.29■□□□□ 0.36
CTSD-206ENST00000497544 FGF20Q9NP95 211 aaPredicted RBP17.29■□□□□ 0.36
CTSD-206ENST00000497544 SLCO1C1Q9NYB5 712 aa17.29■□□□□ 0.36
CTSD-206ENST00000497544 CISD1Q9NZ45 108 aaKnown RBP17.29■□□□□ 0.36
CTSD-206ENST00000497544 CNOT2Q9NZN8 540 aaKnown RBP17.29■□□□□ 0.36
CTSD-206ENST00000497544 MYRFQ9Y2G1 1151 aa17.29■□□□□ 0.36
CTSD-206ENST00000497544 VPS13CQ709C8 3753 aa17.28■□□□□ 0.36
CTSD-206ENST00000497544 J3QRE1 110 aa17.28■□□□□ 0.36
CTSD-206ENST00000497544 M0R135 149 aa17.28■□□□□ 0.36
CTSD-206ENST00000497544 ZNF254O75437 659 aa17.28■□□□□ 0.36
CTSD-206ENST00000497544 ACSM4P0C7M7 580 aa17.28■□□□□ 0.36
CTSD-206ENST00000497544 RGS6P49758 472 aa17.28■□□□□ 0.36
CTSD-206ENST00000497544 RIDAP52758 137 aaKnown RBP17.28■□□□□ 0.36
CTSD-206ENST00000497544 ROM1Q03395 351 aa17.28■□□□□ 0.36
CTSD-206ENST00000497544 ZNF85Q03923 595 aa17.28■□□□□ 0.36
CTSD-206ENST00000497544 SNTB2Q13425 540 aaKnown RBP17.28■□□□□ 0.36
CTSD-206ENST00000497544 KRTAP27-1Q3LI81 207 aa17.28■□□□□ 0.36
CTSD-206ENST00000497544 ZNF672Q499Z4 452 aaPredicted RBP17.28■□□□□ 0.36
CTSD-206ENST00000497544 VHLLQ6RSH7 139 aa17.28■□□□□ 0.36
CTSD-206ENST00000497544 PRIMA1Q86XR5 153 aa17.28■□□□□ 0.36
CTSD-206ENST00000497544 SNX33Q8WV41 574 aa17.28■□□□□ 0.36
CTSD-206ENST00000497544 NEUROG1Q92886 237 aa17.28■□□□□ 0.36
CTSD-206ENST00000497544 ZNF799Q96GE5 643 aa17.28■□□□□ 0.36
CTSD-206ENST00000497544 TMEM80Q96HE8 168 aa17.28■□□□□ 0.36
CTSD-206ENST00000497544 DLL4Q9NR61 685 aa17.28■□□□□ 0.36
CTSD-206ENST00000497544 INPP5EQ9NRR6 644 aa17.28■□□□□ 0.36
CTSD-206ENST00000497544 TBCCD1Q9NVR7 557 aa17.28■□□□□ 0.36
CTSD-206ENST00000497544 CHCHD3Q9NX63 227 aaKnown RBP17.28■□□□□ 0.36
CTSD-206ENST00000497544 PSORS1C1Q9UIG5 152 aa17.28■□□□□ 0.36
CTSD-206ENST00000497544 TPRKBQ9Y3C4 175 aa17.28■□□□□ 0.36
CTSD-206ENST00000497544 COL6A5A8TX70 2615 aa17.27■□□□□ 0.36
CTSD-206ENST00000497544 STAB1Q9NY15 2570 aa17.27■□□□□ 0.36
CTSD-206ENST00000497544 PTGES3LE9PB15 166 aa17.27■□□□□ 0.36
CTSD-206ENST00000497544 SLC1A7O00341 560 aa17.27■□□□□ 0.36
CTSD-206ENST00000497544 LCATP04180 440 aa17.27■□□□□ 0.36
CTSD-206ENST00000497544 KRT8P05787 483 aa17.27■□□□□ 0.36
CTSD-206ENST00000497544 LCKP06239 509 aa17.27■□□□□ 0.36
CTSD-206ENST00000497544 CCDC159P0C7I6 412 aa17.27■□□□□ 0.36
CTSD-206ENST00000497544 PIPP12273 146 aaPredicted RBP17.27■□□□□ 0.36
CTSD-206ENST00000497544 GLRXP35754 106 aa17.27■□□□□ 0.36
CTSD-206ENST00000497544 WNT5AP41221 380 aa17.27■□□□□ 0.36
CTSD-206ENST00000497544 ST3GAL4Q11206 333 aa17.27■□□□□ 0.36
CTSD-206ENST00000497544 DRAM2Q6UX65 266 aa17.27■□□□□ 0.36
CTSD-206ENST00000497544 PLEKHG7Q6ZR37 379 aa17.27■□□□□ 0.36
CTSD-206ENST00000497544 SSX6Q7RTT6 188 aa17.27■□□□□ 0.36
CTSD-206ENST00000497544 LHFPL3Q86UP9 236 aa17.27■□□□□ 0.36
CTSD-206ENST00000497544 C1orf174Q8IYL3 243 aa17.27■□□□□ 0.36
CTSD-206ENST00000497544 ZNF786Q8N393 782 aa17.27■□□□□ 0.36
CTSD-206ENST00000497544 STX19Q8N4C7 294 aa17.27■□□□□ 0.36
CTSD-206ENST00000497544 RFLNBQ8N5W9 214 aa17.27■□□□□ 0.36
CTSD-206ENST00000497544 NUP37Q8NFH4 326 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms