RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 FKBP6O75344 327 aa4.89□□□□□ -1.63
BRCA1-224ENST00000497488 DEXIO95424 95 aa4.89□□□□□ -1.63
BRCA1-224ENST00000497488 KLK3P07288 261 aaPredicted RBP4.89□□□□□ -1.63
BRCA1-224ENST00000497488 MAGEA3P43357 314 aa4.89□□□□□ -1.63
BRCA1-224ENST00000497488 RPL29P47914 159 aaKnown RBP4.89□□□□□ -1.63
BRCA1-224ENST00000497488 HCAR3P49019 387 aa4.89□□□□□ -1.63
BRCA1-224ENST00000497488 OR2B8PP59922 312 aa4.89□□□□□ -1.63
BRCA1-224ENST00000497488 DSTNP60981 165 aa4.89□□□□□ -1.63
BRCA1-224ENST00000497488 RPL31P62899 125 aaKnown RBP4.89□□□□□ -1.63
BRCA1-224ENST00000497488 SLC25A11Q02978 314 aaKnown RBP4.89□□□□□ -1.63
BRCA1-224ENST00000497488 ILF3Q12906 894 aaKnown RBP eCLIP4.89□□□□□ -1.63
BRCA1-224ENST00000497488 ABRAXAS2Q15018 415 aa4.89□□□□□ -1.63
BRCA1-224ENST00000497488 ARL6IP1Q15041 203 aa4.89□□□□□ -1.63
BRCA1-224ENST00000497488 IDNKQ5T6J7 187 aa4.89□□□□□ -1.63
BRCA1-224ENST00000497488 TFAP2EQ6VUC0 442 aa4.89□□□□□ -1.63
BRCA1-224ENST00000497488 LRRC52Q8N7C0 313 aa4.89□□□□□ -1.63
BRCA1-224ENST00000497488 WDR31Q8NA23 367 aa4.89□□□□□ -1.63
BRCA1-224ENST00000497488 BEST4Q8NFU0 473 aa4.89□□□□□ -1.63
BRCA1-224ENST00000497488 RPL36ALQ969Q0 106 aaKnown RBP4.89□□□□□ -1.63
BRCA1-224ENST00000497488 EEF1AKMT3Q96AZ1 226 aa4.89□□□□□ -1.63
BRCA1-224ENST00000497488 AGMATQ9BSE5 352 aa4.89□□□□□ -1.63
BRCA1-224ENST00000497488 METTL8Q9H825 291 aaKnown RBP4.89□□□□□ -1.63
BRCA1-224ENST00000497488 NLE1Q9NVX2 485 aaPredicted RBP4.89□□□□□ -1.63
BRCA1-224ENST00000497488 SDHAF2Q9NX18 166 aa4.89□□□□□ -1.63
BRCA1-224ENST00000497488 CCDC88AQ3V6T2 1871 aa4.89□□□□□ -1.63
BRCA1-224ENST00000497488 NCANO14594 1321 aa4.89□□□□□ -1.63
BRCA1-224ENST00000497488 MEIOCA2RUB1 952 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 CENPBD1B2RD01 187 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 B8ZZF3 427 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 K7EMT4 169 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 EIF3GO75821 320 aaKnown RBP eCLIP4.88□□□□□ -1.63
BRCA1-224ENST00000497488 RPP14O95059 124 aaKnown RBP4.88□□□□□ -1.63
BRCA1-224ENST00000497488 CLDN1O95832 211 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 CD48P09326 243 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 SLC35E2P0CK97 266 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 CT45A10P0DMU9 189 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 IGFBP3P17936 291 aaPredicted RBP4.88□□□□□ -1.63
BRCA1-224ENST00000497488 RAB4AP20338 218 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 PRKACGP22612 351 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 ADORA2BP29275 332 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 SPRP35270 261 aaPredicted RBP4.88□□□□□ -1.63
BRCA1-224ENST00000497488 CSNK1DP48730 415 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 PLK1P53350 603 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 ACTBP60709 375 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 ACTG1P63261 375 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 PAFAH1B2P68402 229 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 CYCSP99999 105 aaKnown RBP4.88□□□□□ -1.63
BRCA1-224ENST00000497488 FKBP3Q00688 224 aaKnown RBP4.88□□□□□ -1.63
BRCA1-224ENST00000497488 DYNC1I2Q13409 638 aaKnown RBP4.88□□□□□ -1.63
BRCA1-224ENST00000497488 PSG5Q15238 335 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 RBM48Q5RL73 367 aaKnown RBP4.88□□□□□ -1.63
BRCA1-224ENST00000497488 TIMM23BQ5SRD1 257 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 MARCH8Q5T0T0 291 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 CPTPQ5TA50 214 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 C9orf57Q5W0N0 161 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 SLC35E4Q6ICL7 350 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 UFSP1Q6NVU6 142 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 WDR82Q6UXN9 313 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 Q6ZSR9 355 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 LRRTM1Q86UE6 522 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 NRMQ8IXM6 262 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 TMEM156Q8N614 296 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 RNASEH2CQ8TDP1 164 aaKnown RBP4.88□□□□□ -1.63
BRCA1-224ENST00000497488 SSC4DQ8WTU2 575 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 ESR2Q92731 530 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 NEUROG1Q92886 237 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 ATXN7L3BQ96GX2 97 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 COL21A1Q96P44 957 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 MCCC1Q96RQ3 725 aaPredicted RBP4.88□□□□□ -1.63
BRCA1-224ENST00000497488 RBBP8Q99708 897 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 CALN1Q9BXU9 219 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 HES7Q9BYE0 225 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 PORCNQ9H237 461 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 OR51J1Q9H342 316 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 RNF167Q9H6Y7 350 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 TMBIM4Q9HC24 238 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 SPHK2Q9NRA0 654 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 Q9UF83 564 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 WDR90Q96KV7 1748 aa4.88□□□□□ -1.63
BRCA1-224ENST00000497488 DICER1Q9UPY3 1922 aaKnown RBP4.87□□□□□ -1.63
BRCA1-224ENST00000497488 IGHV1OR21-1A0A087WYE8 117 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 ZNF816-ZNF321PA0A0X1KG74 233 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 SMIM28A0A1B0GU29 152 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 FOXI3A8MTJ6 420 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-224ENST00000497488 A8MX80 341 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 SLC17A2O00624 439 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 BMP15O95972 392 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 HOXC4P09017 264 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-224ENST00000497488 MAS1LP35410 378 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 COILP38432 576 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-224ENST00000497488 UGT2B15P54855 530 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 DLX5P56178 289 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 DSCR9P59020 149 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 ZNHIT3Q15649 155 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-224ENST00000497488 ZNF726P1Q15940 193 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 C17orf58Q2M2W7 97 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 ZBED5Q49AG3 693 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 PIGGQ5H8A4 983 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 KLF17Q5JT82 389 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-224ENST00000497488 CLVS2Q5SYC1 327 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms