RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 LIPNQ5VXI9 398 aa17.1■□□□□ 0.33
SCAMP3-209ENST00000497470 ZNF773Q6PK81 442 aa17.1■□□□□ 0.33
SCAMP3-209ENST00000497470 SSX6Q7RTT6 188 aa17.1■□□□□ 0.33
SCAMP3-209ENST00000497470 PRSS45Q7RTY3 260 aa17.1■□□□□ 0.33
SCAMP3-209ENST00000497470 LHFPL3Q86UP9 236 aa17.1■□□□□ 0.33
SCAMP3-209ENST00000497470 WFDC8Q8IUA0 241 aa17.1■□□□□ 0.33
SCAMP3-209ENST00000497470 NUP37Q8NFH4 326 aa17.1■□□□□ 0.33
SCAMP3-209ENST00000497470 FCGR1BQ92637 280 aa17.1■□□□□ 0.33
SCAMP3-209ENST00000497470 APOBEC3DQ96AK3 386 aaPredicted RBP17.1■□□□□ 0.33
SCAMP3-209ENST00000497470 ZNF799Q96GE5 643 aa17.1■□□□□ 0.33
SCAMP3-209ENST00000497470 RGCCQ9H4X1 137 aa17.1■□□□□ 0.33
SCAMP3-209ENST00000497470 CDH20Q9HBT6 801 aa17.1■□□□□ 0.33
SCAMP3-209ENST00000497470 CRIM1Q9NZV1 1036 aa17.1■□□□□ 0.33
SCAMP3-209ENST00000497470 IKZF2Q9UKS7 526 aa17.1■□□□□ 0.33
SCAMP3-209ENST00000497470 FLNCQ14315 2725 aa17.1■□□□□ 0.33
SCAMP3-209ENST00000497470 A0A087WXM4 84 aa17.09■□□□□ 0.33
SCAMP3-209ENST00000497470 DPRXA6NFQ7 191 aa17.09■□□□□ 0.33
SCAMP3-209ENST00000497470 SRSF10O75494 262 aaKnown RBP17.09■□□□□ 0.33
SCAMP3-209ENST00000497470 HTR1AP08908 422 aa17.09■□□□□ 0.33
SCAMP3-209ENST00000497470 ZNF83P51522 516 aa17.09■□□□□ 0.33
SCAMP3-209ENST00000497470 GPR50Q13585 617 aa17.09■□□□□ 0.33
SCAMP3-209ENST00000497470 OTPQ5XKR4 325 aa17.09■□□□□ 0.33
SCAMP3-209ENST00000497470 ADAM5Q6NVV9 412 aa17.09■□□□□ 0.33
SCAMP3-209ENST00000497470 LRRN1Q6UXK5 716 aa17.09■□□□□ 0.33
SCAMP3-209ENST00000497470 MEX3BQ6ZN04 569 aaKnown RBP17.09■□□□□ 0.33
SCAMP3-209ENST00000497470 CCDC54Q8NEL0 328 aa17.09■□□□□ 0.33
SCAMP3-209ENST00000497470 OR5L1Q8NGL2 311 aa17.09■□□□□ 0.33
SCAMP3-209ENST00000497470 RPS4Y2Q8TD47 263 aa17.09■□□□□ 0.33
SCAMP3-209ENST00000497470 C4orf45Q96LM5 186 aa17.09■□□□□ 0.33
SCAMP3-209ENST00000497470 TBX5Q99593 518 aa17.09■□□□□ 0.33
SCAMP3-209ENST00000497470 DOK1Q99704 481 aa17.09■□□□□ 0.33
SCAMP3-209ENST00000497470 KCNS3Q9BQ31 491 aa17.09■□□□□ 0.33
SCAMP3-209ENST00000497470 OPA3Q9H6K4 179 aa17.09■□□□□ 0.33
SCAMP3-209ENST00000497470 BABAM2Q9NXR7 383 aa17.09■□□□□ 0.33
SCAMP3-209ENST00000497470 ERVK-18Q9QC07 812 aa17.09■□□□□ 0.33
SCAMP3-209ENST00000497470 SNX5Q9Y5X3 404 aa17.09■□□□□ 0.33
SCAMP3-209ENST00000497470 R4GMQ9 66 aa17.09■□□□□ 0.33
SCAMP3-209ENST00000497470 C5orf49A4QMS7 147 aa17.08■□□□□ 0.32
SCAMP3-209ENST00000497470 DEFB108AA8MXU0 73 aa17.08■□□□□ 0.32
SCAMP3-209ENST00000497470 PRR32B1ATL7 298 aa17.08■□□□□ 0.32
SCAMP3-209ENST00000497470 M0R1B8 84 aa17.08■□□□□ 0.32
SCAMP3-209ENST00000497470 MYL12BO14950 172 aa17.08■□□□□ 0.32
SCAMP3-209ENST00000497470 CLDN1O95832 211 aa17.08■□□□□ 0.32
SCAMP3-209ENST00000497470 ADRA2AP08913 450 aa17.08■□□□□ 0.32
SCAMP3-209ENST00000497470 GBX2P52951 348 aaPredicted RBP17.08■□□□□ 0.32
SCAMP3-209ENST00000497470 RPS23P62266 143 aaKnown RBP17.08■□□□□ 0.32
SCAMP3-209ENST00000497470 TMEM154Q6P9G4 183 aa17.08■□□□□ 0.32
SCAMP3-209ENST00000497470 YIPF7Q8N8F6 280 aa17.08■□□□□ 0.32
SCAMP3-209ENST00000497470 SMAP2Q8WU79 429 aaPredicted RBP17.08■□□□□ 0.32
SCAMP3-209ENST00000497470 PELI1Q96FA3 418 aa17.08■□□□□ 0.32
SCAMP3-209ENST00000497470 MS4A3Q96HJ5 214 aa17.08■□□□□ 0.32
SCAMP3-209ENST00000497470 NUFIP1Q9UHK0 495 aaKnown RBP17.08■□□□□ 0.32
SCAMP3-209ENST00000497470 HELZ2Q9BYK8 2649 aaKnown RBP17.07■□□□□ 0.32
SCAMP3-209ENST00000497470 A0A0U1RQV5 110 aa17.07■□□□□ 0.32
SCAMP3-209ENST00000497470 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.07■□□□□ 0.32
SCAMP3-209ENST00000497470 MT-ND2P03891 347 aa17.07■□□□□ 0.32
SCAMP3-209ENST00000497470 CELA3BP08861 270 aa17.07■□□□□ 0.32
SCAMP3-209ENST00000497470 NR4A1P22736 598 aa17.07■□□□□ 0.32
SCAMP3-209ENST00000497470 CFL1P23528 166 aaKnown RBP17.07■□□□□ 0.32
SCAMP3-209ENST00000497470 LOXP28300 417 aaPredicted RBP17.07■□□□□ 0.32
SCAMP3-209ENST00000497470 GLRXP35754 106 aa17.07■□□□□ 0.32
SCAMP3-209ENST00000497470 UCP2P55851 309 aa17.07■□□□□ 0.32
SCAMP3-209ENST00000497470 OR12D2P58182 307 aa17.07■□□□□ 0.32
SCAMP3-209ENST00000497470 NKX6-1P78426 367 aaPredicted RBP17.07■□□□□ 0.32
SCAMP3-209ENST00000497470 SPHARQ15513 63 aa17.07■□□□□ 0.32
SCAMP3-209ENST00000497470 SPARTQ8N0X7 666 aa17.07■□□□□ 0.32
SCAMP3-209ENST00000497470 RFLNBQ8N5W9 214 aa17.07■□□□□ 0.32
SCAMP3-209ENST00000497470 C4orf36Q96KX1 117 aa17.07■□□□□ 0.32
SCAMP3-209ENST00000497470 ZNF442Q9H7R0 627 aa17.07■□□□□ 0.32
SCAMP3-209ENST00000497470 TRIM36Q9NQ86 728 aa17.07■□□□□ 0.32
SCAMP3-209ENST00000497470 FAM206AQ9NX38 181 aa17.07■□□□□ 0.32
SCAMP3-209ENST00000497470 LSM2Q9Y333 95 aaKnown RBP17.07■□□□□ 0.32
SCAMP3-209ENST00000497470 LRRK2Q5S007 2527 aa17.07■□□□□ 0.32
SCAMP3-209ENST00000497470 TMEM269A0A1B0GVZ9 245 aa17.06■□□□□ 0.32
SCAMP3-209ENST00000497470 MAGEA13PA6NCF6 341 aa17.06■□□□□ 0.32
SCAMP3-209ENST00000497470 VSTM5A8MXK1 200 aa17.06■□□□□ 0.32
SCAMP3-209ENST00000497470 F5H5K5 113 aa17.06■□□□□ 0.32
SCAMP3-209ENST00000497470 OGG1O15527 345 aa17.06■□□□□ 0.32
SCAMP3-209ENST00000497470 XRCC2O43543 280 aa17.06■□□□□ 0.32
SCAMP3-209ENST00000497470 CD3EP07766 207 aa17.06■□□□□ 0.32
SCAMP3-209ENST00000497470 CD53P19397 219 aa17.06■□□□□ 0.32
SCAMP3-209ENST00000497470 CX3CR1P49238 355 aa17.06■□□□□ 0.32
SCAMP3-209ENST00000497470 GALK2Q01415 458 aa17.06■□□□□ 0.32
SCAMP3-209ENST00000497470 BSPH1Q075Z2 132 aa17.06■□□□□ 0.32
SCAMP3-209ENST00000497470 UBE2UQ5VVX9 321 aa17.06■□□□□ 0.32
SCAMP3-209ENST00000497470 SP5Q6BEB4 398 aaPredicted RBP17.06■□□□□ 0.32
SCAMP3-209ENST00000497470 RPL22L1Q6P5R6 122 aaKnown RBP17.06■□□□□ 0.32
SCAMP3-209ENST00000497470 Q6ZSR3 168 aa17.06■□□□□ 0.32
SCAMP3-209ENST00000497470 MYPOPQ86VE0 399 aaPredicted RBP17.06■□□□□ 0.32
SCAMP3-209ENST00000497470 ZNF283Q8N7M2 679 aa17.06■□□□□ 0.32
SCAMP3-209ENST00000497470 TSPAN14Q8NG11 270 aa17.06■□□□□ 0.32
SCAMP3-209ENST00000497470 RORBQ92753 470 aa17.06■□□□□ 0.32
SCAMP3-209ENST00000497470 SPSB4Q96A44 273 aa17.06■□□□□ 0.32
SCAMP3-209ENST00000497470 PLPPR2Q96GM1 343 aa17.06■□□□□ 0.32
SCAMP3-209ENST00000497470 ZC3HAV1LQ96H79 300 aaKnown RBP17.06■□□□□ 0.32
SCAMP3-209ENST00000497470 ACOT13Q9NPJ3 140 aa17.06■□□□□ 0.32
SCAMP3-209ENST00000497470 CLEC2DQ9UHP7 191 aa17.06■□□□□ 0.32
SCAMP3-209ENST00000497470 GNG8Q9UK08 70 aa17.06■□□□□ 0.32
SCAMP3-209ENST00000497470 LOC110117498-PIK3R3F6TDL0 507 aa17.05■□□□□ 0.32
SCAMP3-209ENST00000497470 J3QLW9 94 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms