RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 TAS2R39P59534 338 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 XIAPP98170 497 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 CHRNB3Q05901 458 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 SELENBP1Q13228 472 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 IL18R1Q13478 541 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 CUL1Q13616 776 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 SERTAD2Q14140 314 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 RCAN2Q14206 197 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 FZD2Q14332 565 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 IHHQ14623 411 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 OXA1LQ15070 435 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 SIX1Q15475 284 aaPredicted RBP1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 FAM189A2Q15884 450 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 MRPL23Q16540 153 aaKnown RBP1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 MICAQ29983 383 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 DEFB133Q30KQ1 61 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 MOGAT2Q3SYC2 334 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 C9orf66Q5T8R8 295 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 MEDAGQ5VYS4 303 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 PDPK2PQ6A1A2 396 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 SPESP1Q6UW49 350 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 LINC00336Q6ZUF6 198 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 BHLHA15Q7RTS1 189 aaPredicted RBP1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 PRSS41Q7RTY9 318 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 PPP1R27Q86WC6 154 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 RAB42Q8N4Z0 105 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 JAGN1Q8N5M9 183 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 Q8N9P0 234 aaPredicted RBP1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 OR2T6Q8NHC8 308 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 ZNF519Q8TB69 540 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 CA5BP1Q8WTZ4 195 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 TFB1MQ8WVM0 346 aaKnown RBP1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 MYDGFQ969H8 173 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 ZNF501Q96CX3 271 aaPredicted RBP1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 DUS3LQ96G46 650 aaKnown RBP1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 SEC22AQ96IW7 307 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 TBX15Q96SF7 602 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 ATF6BQ99941 703 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 KCTD14Q9BQ13 255 aaPredicted RBP1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 CCDC28BQ9BUN5 200 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 MCRIP2Q9BUT9 160 aaKnown RBP1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 KRTAP4-8Q9BYQ9 185 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 SLC7A5P2Q9GIP4 190 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 RAB1BQ9H0U4 201 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 ELL3Q9HB65 397 aaPredicted RBP1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 SPACA1Q9HBV2 294 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 ADGRL4Q9HBW9 690 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 ADAP2Q9NPF8 381 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 B3GAT2Q9NPZ5 323 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 CHRAC1Q9NRG0 131 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 PNO1Q9NRX1 252 aaKnown RBP1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 IMPAD1Q9NX62 359 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 SLC39A1Q9NY26 324 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 ADA2Q9NZK5 511 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 CTSZQ9UBR2 303 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 CTSFQ9UBX1 484 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 PDE10AQ9Y233 779 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 SLC17A4Q9Y2C5 497 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 FBXO7Q9Y3I1 522 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 RPL36Q9Y3U8 105 aaKnown RBP1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 PCDHGB1Q9Y5G3 927 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 UBIAD1Q9Y5Z9 338 aa1.91□□□□□ -2.1
CKS1BP2-201ENST00000497342 MPDZO75970 2070 aa1.9□□□□□ -2.1
CKS1BP2-201ENST00000497342 DNAJC13O75165 2243 aa1.9□□□□□ -2.1
CKS1BP2-201ENST00000497342 CITO14578 2027 aa1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 DNAH3Q8TD57 4116 aa1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 IQANK1A0A1B0GTG1 560 aa1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 DCTN6O00399 190 aa1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 RAB29O14966 203 aa1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 SCAMP2O15127 329 aaKnown RBP1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 ZNF749O43361 778 aa1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 PSTPIP1O43586 416 aa1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 BUB3O43684 328 aa1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 SOX15O60248 233 aa1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 GMDSO60547 372 aa1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 SCN2BO60939 215 aa1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 YEATS4O95619 227 aa1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 NTN1O95631 604 aa1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 PIGRP01833 764 aa1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 ALOX5P09917 674 aa1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 ZSCAN5DPP0CG00 497 aa1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 CT45A6P0DMU7 189 aa1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 CT45A5P0DMU8 189 aa1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 CT45A7P0DMV0 189 aa1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 RNH1P13489 461 aaKnown RBP1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 PTNP21246 168 aa1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 PRKACGP22612 351 aa1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 DCKP27707 260 aa1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 HMOX2P30519 316 aa1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 CFHR2P36980 270 aa1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 MMP12P39900 470 aa1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 AQP2P41181 271 aa1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 CDKN2AP42771 156 aaKnown RBP1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 KIR2DS4P43632 304 aa1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 RIDAP52758 137 aaKnown RBP1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 PLK1P53350 603 aa1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 LINC01547P58512 204 aaPredicted RBP1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 ITGB3BPQ13352 177 aaPredicted RBP1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 XRCC4Q13426 336 aa1.9□□□□□ -2.11
CKS1BP2-201ENST00000497342 PRR4Q16378 134 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms