RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 OR2L8Q8NGY9 312 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 COQ8AQ8NI60 647 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 NRBF2Q96F24 287 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 COL21A1Q96P44 957 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 ZNF382Q96SR6 550 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 TIMM17AQ99595 171 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 FOXC2Q99958 501 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 BLZF1Q9H2G9 400 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 ACP6Q9NPH0 428 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 MED4Q9NPJ6 270 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 SLC39A1Q9NY26 324 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 AHSPQ9NZD4 102 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 ZNF222Q9UK12 451 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 NUP214P35658 2090 aaPredicted RBP2.49□□□□□ -2.01
SMC4-225ENST00000497203 DOCK9Q9BZ29 2069 aa2.49□□□□□ -2.01
SMC4-225ENST00000497203 H7C417 338 aa2.49□□□□□ -2.01
SMC4-225ENST00000497203 BET1O15155 118 aa2.49□□□□□ -2.01
SMC4-225ENST00000497203 AKR7A2O43488 359 aa2.49□□□□□ -2.01
SMC4-225ENST00000497203 HSBP1O75506 76 aa2.49□□□□□ -2.01
SMC4-225ENST00000497203 SEMA3DO95025 777 aa2.49□□□□□ -2.01
SMC4-225ENST00000497203 CTDNEP1O95476 244 aa2.49□□□□□ -2.01
SMC4-225ENST00000497203 IGKV3-11P04433 115 aa2.49□□□□□ -2.01
SMC4-225ENST00000497203 CTSLP07711 333 aa2.49□□□□□ -2.01
SMC4-225ENST00000497203 CISD3P0C7P0 127 aa2.49□□□□□ -2.01
SMC4-225ENST00000497203 RPS23P62266 143 aaKnown RBP2.49□□□□□ -2.01
SMC4-225ENST00000497203 IRF8Q02556 426 aa2.49□□□□□ -2.01
SMC4-225ENST00000497203 ZNF33AQ06730 810 aa2.49□□□□□ -2.01
SMC4-225ENST00000497203 RCAN2Q14206 197 aa2.49□□□□□ -2.01
SMC4-225ENST00000497203 PTGES3Q15185 160 aaKnown RBP2.49□□□□□ -2.01
SMC4-225ENST00000497203 TCEAL5Q5H9L2 206 aa2.49□□□□□ -2.01
SMC4-225ENST00000497203 C12orf54Q6X4T0 127 aa2.49□□□□□ -2.01
SMC4-225ENST00000497203 HORMAD1Q86X24 394 aa2.49□□□□□ -2.01
SMC4-225ENST00000497203 CBLN2Q8IUK8 224 aa2.49□□□□□ -2.01
SMC4-225ENST00000497203 VKORC1L1Q8N0U8 176 aa2.49□□□□□ -2.01
SMC4-225ENST00000497203 OR11H7Q8NGC8 314 aa2.49□□□□□ -2.01
SMC4-225ENST00000497203 OR10AD1Q8NGE0 317 aa2.49□□□□□ -2.01
SMC4-225ENST00000497203 PIFOQ8TCI5 191 aa2.49□□□□□ -2.01
SMC4-225ENST00000497203 C15orf40Q8WUR7 153 aa2.49□□□□□ -2.01
SMC4-225ENST00000497203 TCEAL3Q969E4 200 aa2.49□□□□□ -2.01
SMC4-225ENST00000497203 BTN2A3PQ96KV6 586 aa2.49□□□□□ -2.01
SMC4-225ENST00000497203 GPR21Q99679 349 aa2.49□□□□□ -2.01
SMC4-225ENST00000497203 EDA2RQ9HAV5 297 aa2.49□□□□□ -2.01
SMC4-225ENST00000497203 PATZ1Q9HBE1 687 aaKnown RBP2.49□□□□□ -2.01
SMC4-225ENST00000497203 RPRD1BQ9NQG5 326 aaKnown RBP2.49□□□□□ -2.01
SMC4-225ENST00000497203 MTFP1Q9UDX5 166 aa2.49□□□□□ -2.01
SMC4-225ENST00000497203 FHOD3Q2V2M9 1422 aa2.49□□□□□ -2.01
SMC4-225ENST00000497203 PHLPP2Q6ZVD8 1323 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 MYO10Q9HD67 2058 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 IGLV4-60A0A075B6I1 120 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 TMEM223A0PJW6 202 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 PDZK1P1A8MUH7 402 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 H0YC42 278 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 TRDMT1O14717 391 aaKnown RBP2.48□□□□□ -2.01
SMC4-225ENST00000497203 YIF1AO95070 293 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 VAMP5O95183 116 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 PRB2P02812 416 aaPredicted RBP2.48□□□□□ -2.01
SMC4-225ENST00000497203 KRT16P08779 473 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 MSR1P21757 451 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 CD82P27701 267 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 RBM34P42696 430 aaKnown RBP2.48□□□□□ -2.01
SMC4-225ENST00000497203 GPR1P46091 355 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 CDKN2DP55273 166 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 UBE2MP61081 183 aaKnown RBP2.48□□□□□ -2.01
SMC4-225ENST00000497203 LOXL1Q08397 574 aaPredicted RBP2.48□□□□□ -2.01
SMC4-225ENST00000497203 SLAQ13239 276 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 DOC2AQ14183 400 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 EBI3Q14213 229 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 FAM83EQ2M2I3 478 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 ZNF691Q5VV52 312 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 ADNP2Q6IQ32 1131 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 RWDD4Q6NW29 188 aaKnown RBP2.48□□□□□ -2.01
SMC4-225ENST00000497203 PRMT9Q6P2P2 845 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 WDR82Q6UXN9 313 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 SNX20Q7Z614 316 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 ZNF547Q8IVP9 402 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 MYOCDQ8IZQ8 938 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 UBALD1Q8TB05 177 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 RGP1Q92546 391 aaPredicted RBP2.48□□□□□ -2.01
SMC4-225ENST00000497203 RPEQ96AT9 228 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 CSPG4P5Q96PW8 444 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 HSD17B10Q99714 261 aaKnown RBP2.48□□□□□ -2.01
SMC4-225ENST00000497203 IL22Q9GZX6 179 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 RGCCQ9H4X1 137 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 C12orf10Q9HB07 376 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 MYOZ1Q9NP98 299 aaPredicted RBP2.48□□□□□ -2.01
SMC4-225ENST00000497203 ZNF355PQ9NSJ1 428 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 MCUBQ9NWR8 336 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 YARS2Q9Y2Z4 477 aaKnown RBP2.48□□□□□ -2.01
SMC4-225ENST00000497203 ADAMTS13Q76LX8 1427 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 PALLDQ8WX93 1383 aa2.48□□□□□ -2.01
SMC4-225ENST00000497203 TRAV19A0A0A6YYK7 116 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 IGHV3OR16-9A0A0B4J2B5 98 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 NME4O00746 187 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 PLPP1O14494 284 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 RAD51BO15315 384 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 ZNF324O75467 553 aaPredicted RBP2.47□□□□□ -2.01
SMC4-225ENST00000497203 FARS2O95363 451 aaKnown RBP2.47□□□□□ -2.01
SMC4-225ENST00000497203 GFAPP14136 432 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 ZNF32P17041 273 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 RAB5AP20339 215 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms