RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 ENTPD1P49961 510 aa13.71□□□□□ -0.21
DNMT3A-215ENST00000496570 CRISP1P54107 249 aa13.71□□□□□ -0.21
DNMT3A-215ENST00000496570 ACTR3P61158 418 aa13.71□□□□□ -0.21
DNMT3A-215ENST00000496570 MOGQ16653 247 aa13.71□□□□□ -0.21
DNMT3A-215ENST00000496570 PCGF3Q3KNV8 242 aa13.71□□□□□ -0.21
DNMT3A-215ENST00000496570 DCXRQ7Z4W1 244 aa13.71□□□□□ -0.21
DNMT3A-215ENST00000496570 BBS1Q8NFJ9 593 aa13.71□□□□□ -0.21
DNMT3A-215ENST00000496570 DNAJC9Q8WXX5 260 aa13.71□□□□□ -0.21
DNMT3A-215ENST00000496570 APOBEC3DQ96AK3 386 aaPredicted RBP13.71□□□□□ -0.21
DNMT3A-215ENST00000496570 CHODLQ9H9P2 273 aa13.71□□□□□ -0.21
DNMT3A-215ENST00000496570 MSL2Q9HCI7 577 aa13.71□□□□□ -0.21
DNMT3A-215ENST00000496570 ZNF275Q9NSD4 429 aaPredicted RBP13.71□□□□□ -0.21
DNMT3A-215ENST00000496570 SONP18583 2426 aaKnown RBP13.71□□□□□ -0.22
DNMT3A-215ENST00000496570 LRP5LA4QPB2 252 aa13.7□□□□□ -0.22
DNMT3A-215ENST00000496570 F5H5K5 113 aa13.7□□□□□ -0.22
DNMT3A-215ENST00000496570 H3BNX3 289 aa13.7□□□□□ -0.22
DNMT3A-215ENST00000496570 WNT9BO14905 357 aa13.7□□□□□ -0.22
DNMT3A-215ENST00000496570 SPRY3O43610 288 aa13.7□□□□□ -0.22
DNMT3A-215ENST00000496570 GLCEO94923 617 aa13.7□□□□□ -0.22
DNMT3A-215ENST00000496570 ZNF23P17027 643 aa13.7□□□□□ -0.22
DNMT3A-215ENST00000496570 SLC2A5P22732 501 aa13.7□□□□□ -0.22
DNMT3A-215ENST00000496570 ECH1Q13011 328 aa13.7□□□□□ -0.22
DNMT3A-215ENST00000496570 HNRNPA0Q13151 305 aaKnown RBP13.7□□□□□ -0.22
DNMT3A-215ENST00000496570 CDK5R2Q13319 367 aa13.7□□□□□ -0.22
DNMT3A-215ENST00000496570 KPNB1Q14974 876 aaKnown RBP13.7□□□□□ -0.22
DNMT3A-215ENST00000496570 TSTQ16762 297 aaKnown RBP13.7□□□□□ -0.22
DNMT3A-215ENST00000496570 KDM4DQ6B0I6 523 aa13.7□□□□□ -0.22
DNMT3A-215ENST00000496570 PLBD1Q6P4A8 553 aa13.7□□□□□ -0.22
DNMT3A-215ENST00000496570 HIPK1Q86Z02 1210 aa13.7□□□□□ -0.22
DNMT3A-215ENST00000496570 TIGD4Q8IY51 512 aa13.7□□□□□ -0.22
DNMT3A-215ENST00000496570 ZNF540Q8NDQ6 660 aa13.7□□□□□ -0.22
DNMT3A-215ENST00000496570 OR6K6Q8NGW6 343 aa13.7□□□□□ -0.22
DNMT3A-215ENST00000496570 COG8Q96MW5 612 aa13.7□□□□□ -0.22
DNMT3A-215ENST00000496570 PTTG3PQ9NZH4 202 aa13.7□□□□□ -0.22
DNMT3A-215ENST00000496570 TMEFF2Q9UIK5 374 aaPredicted RBP13.7□□□□□ -0.22
DNMT3A-215ENST00000496570 CACNG2Q9Y698 323 aa13.7□□□□□ -0.22
DNMT3A-215ENST00000496570 SVEP1Q4LDE5 3571 aa13.69□□□□□ -0.22
DNMT3A-215ENST00000496570 G3V2T6 193 aa13.69□□□□□ -0.22
DNMT3A-215ENST00000496570 CIB2O75838 187 aa13.69□□□□□ -0.22
DNMT3A-215ENST00000496570 HMGN1P05114 100 aa13.69□□□□□ -0.22
DNMT3A-215ENST00000496570 CD55P08174 381 aa13.69□□□□□ -0.22
DNMT3A-215ENST00000496570 SPARCP09486 303 aa13.69□□□□□ -0.22
DNMT3A-215ENST00000496570 RAC2P15153 192 aa13.69□□□□□ -0.22
DNMT3A-215ENST00000496570 RBMXP38159 391 aaKnown RBP13.69□□□□□ -0.22
DNMT3A-215ENST00000496570 CRYBB2P43320 205 aa13.69□□□□□ -0.22
DNMT3A-215ENST00000496570 PTGES3Q15185 160 aaKnown RBP13.69□□□□□ -0.22
DNMT3A-215ENST00000496570 FAM209AQ5JX71 171 aa13.69□□□□□ -0.22
DNMT3A-215ENST00000496570 C6orf52Q5T4I8 152 aa13.69□□□□□ -0.22
DNMT3A-215ENST00000496570 CPOQ8IVL8 374 aa13.69□□□□□ -0.22
DNMT3A-215ENST00000496570 PYDC1Q8WXC3 89 aa13.69□□□□□ -0.22
DNMT3A-215ENST00000496570 AMELYQ99218 206 aa13.69□□□□□ -0.22
DNMT3A-215ENST00000496570 OR51V1Q9H2C8 321 aa13.69□□□□□ -0.22
DNMT3A-215ENST00000496570 SEMA6AQ9H2E6 1030 aa13.69□□□□□ -0.22
DNMT3A-215ENST00000496570 CYSLTR2Q9NS75 346 aa13.69□□□□□ -0.22
DNMT3A-215ENST00000496570 KIF17Q9P2E2 1029 aa13.69□□□□□ -0.22
DNMT3A-215ENST00000496570 CGGBP1Q9UFW8 167 aaPredicted RBP13.69□□□□□ -0.22
DNMT3A-215ENST00000496570 TANC2Q9HCD6 1990 aa13.69□□□□□ -0.22
DNMT3A-215ENST00000496570 IGHV1-69-2A0A0G2JMI3 117 aa13.68□□□□□ -0.22
DNMT3A-215ENST00000496570 PLSCR5A0PG75 271 aa13.68□□□□□ -0.22
DNMT3A-215ENST00000496570 PRR23D1E9PI22 279 aaPredicted RBP13.68□□□□□ -0.22
DNMT3A-215ENST00000496570 TLX2O43763 284 aaPredicted RBP13.68□□□□□ -0.22
DNMT3A-215ENST00000496570 TIMM8AO60220 97 aaPredicted RBP13.68□□□□□ -0.22
DNMT3A-215ENST00000496570 CDC14BO60729 498 aa13.68□□□□□ -0.22
DNMT3A-215ENST00000496570 PRR23D2P0DMB1 279 aaPredicted RBP13.68□□□□□ -0.22
DNMT3A-215ENST00000496570 FCGR1AP12314 374 aa13.68□□□□□ -0.22
DNMT3A-215ENST00000496570 GSTT1P30711 240 aa13.68□□□□□ -0.22
DNMT3A-215ENST00000496570 LIPAP38571 399 aa13.68□□□□□ -0.22
DNMT3A-215ENST00000496570 BLVRAP53004 296 aa13.68□□□□□ -0.22
DNMT3A-215ENST00000496570 PRSS12P56730 875 aa13.68□□□□□ -0.22
DNMT3A-215ENST00000496570 ESRRGP62508 458 aa13.68□□□□□ -0.22
DNMT3A-215ENST00000496570 EFNB1P98172 346 aa13.68□□□□□ -0.22
DNMT3A-215ENST00000496570 OR2T2Q6IF00 324 aa13.68□□□□□ -0.22
DNMT3A-215ENST00000496570 USP51Q70EK9 711 aa13.68□□□□□ -0.22
DNMT3A-215ENST00000496570 DPY19L4Q7Z388 723 aa13.68□□□□□ -0.22
DNMT3A-215ENST00000496570 MSI2Q96DH6 328 aaKnown RBP13.68□□□□□ -0.22
DNMT3A-215ENST00000496570 SLAMF6Q96DU3 332 aa13.68□□□□□ -0.22
DNMT3A-215ENST00000496570 ZMYND19Q96E35 227 aaPredicted RBP13.68□□□□□ -0.22
DNMT3A-215ENST00000496570 CENPNQ96H22 339 aaPredicted RBP13.68□□□□□ -0.22
DNMT3A-215ENST00000496570 A0A1B0GWJ7 208 aa13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 CCDC182A6NF36 153 aa13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 M0R129 80 aa13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 M0R135 149 aa13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 EBAG9O00559 213 aa13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 PRODHO43272 600 aa13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 PRKYO43930 277 aa13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 SELENOFO60613 162 aa13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 MT-ND5P03915 603 aa13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 ZNF16P17020 682 aaPredicted RBP13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 PAICSP22234 425 aaKnown RBP13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 TMEM33P57088 247 aa13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 PPP2R2BQ00005 443 aa13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 GK2Q14410 553 aaPredicted RBP13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 SNAI3Q3KNW1 292 aa13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 ZDHHC13Q8IUH4 622 aa13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 ERI1Q8IV48 349 aaKnown RBP13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 OR5AS1Q8N127 324 aa13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 OR5L1Q8NGL2 311 aa13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 OR6N2Q8NGY6 317 aa13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 RNF133Q8WVZ7 376 aa13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 OTULINQ96BN8 352 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms