RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 MRM2Q9UI43 246 aaKnown RBP18.82■□□□□ 0.6
C9orf3-222ENST00000496567 HEATR1Q9H583 2144 aaKnown RBP18.82■□□□□ 0.6
C9orf3-222ENST00000496567 RGS10O43665 173 aa18.81■□□□□ 0.6
C9orf3-222ENST00000496567 ICMTO60725 284 aa18.81■□□□□ 0.6
C9orf3-222ENST00000496567 ACSM4P0C7M7 580 aa18.81■□□□□ 0.6
C9orf3-222ENST00000496567 LIMS3P0CW19 117 aa18.81■□□□□ 0.6
C9orf3-222ENST00000496567 LIMS4P0CW20 117 aa18.81■□□□□ 0.6
C9orf3-222ENST00000496567 COL8A1P27658 744 aa18.81■□□□□ 0.6
C9orf3-222ENST00000496567 LOXP28300 417 aaPredicted RBP18.81■□□□□ 0.6
C9orf3-222ENST00000496567 C21orf33P30042 268 aaPredicted RBP18.81■□□□□ 0.6
C9orf3-222ENST00000496567 SLC6A9P48067 706 aa18.81■□□□□ 0.6
C9orf3-222ENST00000496567 PRKXP51817 358 aa18.81■□□□□ 0.6
C9orf3-222ENST00000496567 GABARAPL2P60520 117 aa18.81■□□□□ 0.6
C9orf3-222ENST00000496567 SPOCK1Q08629 439 aa18.81■□□□□ 0.6
C9orf3-222ENST00000496567 YIPF7Q8N8F6 280 aa18.81■□□□□ 0.6
C9orf3-222ENST00000496567 ZNF649Q9BS31 505 aa18.81■□□□□ 0.6
C9orf3-222ENST00000496567 SP140LQ9H930 580 aa18.81■□□□□ 0.6
C9orf3-222ENST00000496567 ATP6V1G2-DDX39BF2Z307 99 aa18.81■□□□□ 0.6
C9orf3-222ENST00000496567 MAGEB4O15481 346 aaPredicted RBP18.81■□□□□ 0.6
C9orf3-222ENST00000496567 RAD52P43351 418 aa18.81■□□□□ 0.6
C9orf3-222ENST00000496567 CX3CR1P49238 355 aa18.81■□□□□ 0.6
C9orf3-222ENST00000496567 ETV1P50549 477 aa18.81■□□□□ 0.6
C9orf3-222ENST00000496567 CHN2P52757 468 aa18.81■□□□□ 0.6
C9orf3-222ENST00000496567 MVKQ03426 396 aa18.81■□□□□ 0.6
C9orf3-222ENST00000496567 ZNF829Q3KNS6 432 aaPredicted RBP18.81■□□□□ 0.6
C9orf3-222ENST00000496567 RNLSQ5VYX0 342 aa18.81■□□□□ 0.6
C9orf3-222ENST00000496567 ADAM5Q6NVV9 412 aa18.81■□□□□ 0.6
C9orf3-222ENST00000496567 TMPRSS11AQ6ZMR5 421 aa18.81■□□□□ 0.6
C9orf3-222ENST00000496567 C1orf174Q8IYL3 243 aa18.81■□□□□ 0.6
C9orf3-222ENST00000496567 SYS1Q8N2H4 156 aa18.81■□□□□ 0.6
C9orf3-222ENST00000496567 DOK1Q99704 481 aa18.81■□□□□ 0.6
C9orf3-222ENST00000496567 TMEM204Q9BSN7 226 aa18.81■□□□□ 0.6
C9orf3-222ENST00000496567 BCL2L14Q9BZR8 327 aa18.81■□□□□ 0.6
C9orf3-222ENST00000496567 TBCCD1Q9NVR7 557 aa18.81■□□□□ 0.6
C9orf3-222ENST00000496567 GNG8Q9UK08 70 aa18.81■□□□□ 0.6
C9orf3-222ENST00000496567 POU2F3Q9UKI9 436 aa18.81■□□□□ 0.6
C9orf3-222ENST00000496567 CAB39Q9Y376 341 aaPredicted RBP18.81■□□□□ 0.6
C9orf3-222ENST00000496567 UTP20O75691 2785 aaKnown RBP18.8■□□□□ 0.6
C9orf3-222ENST00000496567 J3QW42 95 aa18.8■□□□□ 0.6
C9orf3-222ENST00000496567 ADRA2AP08913 450 aa18.8■□□□□ 0.6
C9orf3-222ENST00000496567 NR4A1P22736 598 aa18.8■□□□□ 0.6
C9orf3-222ENST00000496567 WNT5AP41221 380 aa18.8■□□□□ 0.6
C9orf3-222ENST00000496567 UCP2P55851 309 aa18.8■□□□□ 0.6
C9orf3-222ENST00000496567 TP53I3Q53FA7 332 aa18.8■□□□□ 0.6
C9orf3-222ENST00000496567 PRSS48Q7RTY5 328 aa18.8■□□□□ 0.6
C9orf3-222ENST00000496567 KLHL36Q8N4N3 616 aa18.8■□□□□ 0.6
C9orf3-222ENST00000496567 APOBEC3DQ96AK3 386 aaPredicted RBP18.8■□□□□ 0.6
C9orf3-222ENST00000496567 HS3ST6Q96QI5 342 aa18.8■□□□□ 0.6
C9orf3-222ENST00000496567 C1QTNF5Q9BXJ0 243 aa18.8■□□□□ 0.6
C9orf3-222ENST00000496567 CDCA4Q9BXL8 241 aa18.8■□□□□ 0.6
C9orf3-222ENST00000496567 ERVK-18Q9QC07 812 aa18.8■□□□□ 0.6
C9orf3-222ENST00000496567 ERGIC3Q9Y282 383 aa18.8■□□□□ 0.6
C9orf3-222ENST00000496567 FAM221AA4D161 298 aa18.79■□□□□ 0.6
C9orf3-222ENST00000496567 J3QLW9 94 aa18.79■□□□□ 0.6
C9orf3-222ENST00000496567 MRPS14O60783 128 aaKnown RBP18.79■□□□□ 0.6
C9orf3-222ENST00000496567 ZNF19P17023 458 aa18.79■□□□□ 0.6
C9orf3-222ENST00000496567 OR12D2P58182 307 aa18.79■□□□□ 0.6
C9orf3-222ENST00000496567 PSMA6P60900 246 aaKnown RBP18.79■□□□□ 0.6
C9orf3-222ENST00000496567 HGFACQ04756 655 aa18.79■□□□□ 0.6
C9orf3-222ENST00000496567 LIPNQ5VXI9 398 aa18.79■□□□□ 0.6
C9orf3-222ENST00000496567 NUP37Q8NFH4 326 aa18.79■□□□□ 0.6
C9orf3-222ENST00000496567 SGCDQ92629 289 aa18.79■□□□□ 0.6
C9orf3-222ENST00000496567 C4orf36Q96KX1 117 aa18.79■□□□□ 0.6
C9orf3-222ENST00000496567 COG8Q96MW5 612 aa18.79■□□□□ 0.6
C9orf3-222ENST00000496567 CCDC90BQ9GZT6 254 aa18.79■□□□□ 0.6
C9orf3-222ENST00000496567 ATP23Q9Y6H3 246 aa18.79■□□□□ 0.6
C9orf3-222ENST00000496567 TMEM269A0A1B0GVZ9 245 aa18.78■□□□□ 0.6
C9orf3-222ENST00000496567 ACOD1A6NK06 481 aa18.78■□□□□ 0.6
C9orf3-222ENST00000496567 SHISA9B4DS77 424 aa18.78■□□□□ 0.6
C9orf3-222ENST00000496567 MYL12BO14950 172 aa18.78■□□□□ 0.6
C9orf3-222ENST00000496567 LCATP04180 440 aa18.78■□□□□ 0.6
C9orf3-222ENST00000496567 ANXA2P07355 339 aaKnown RBP18.78■□□□□ 0.6
C9orf3-222ENST00000496567 ZNF704Q6ZNC4 412 aaPredicted RBP18.78■□□□□ 0.6
C9orf3-222ENST00000496567 COLCA1Q6ZS62 124 aa18.78■□□□□ 0.6
C9orf3-222ENST00000496567 ZNF101Q8IZC7 436 aa18.78■□□□□ 0.6
C9orf3-222ENST00000496567 KBTBD8Q8NFY9 601 aa18.78■□□□□ 0.6
C9orf3-222ENST00000496567 OR5L1Q8NGL2 311 aa18.78■□□□□ 0.6
C9orf3-222ENST00000496567 OR52N1Q8NH53 320 aa18.78■□□□□ 0.6
C9orf3-222ENST00000496567 HAVCR2Q8TDQ0 301 aa18.78■□□□□ 0.6
C9orf3-222ENST00000496567 SIGLEC11Q96RL6 698 aa18.78■□□□□ 0.6
C9orf3-222ENST00000496567 CLEC2DQ9UHP7 191 aa18.78■□□□□ 0.6
C9orf3-222ENST00000496567 RTTNQ86VV8 2226 aa18.78■□□□□ 0.6
C9orf3-222ENST00000496567 PKDREJQ9NTG1 2253 aa18.77■□□□□ 0.6
C9orf3-222ENST00000496567 TMEM129A0AVI4 362 aa18.77■□□□□ 0.6
C9orf3-222ENST00000496567 SMPD2O60906 423 aa18.77■□□□□ 0.6
C9orf3-222ENST00000496567 RPP14O95059 124 aaKnown RBP18.77■□□□□ 0.6
C9orf3-222ENST00000496567 TNFAIP8O95379 198 aa18.77■□□□□ 0.6
C9orf3-222ENST00000496567 MT-ND5P03915 603 aa18.77■□□□□ 0.6
C9orf3-222ENST00000496567 FAM157BP0CG42 384 aa18.77■□□□□ 0.6
C9orf3-222ENST00000496567 TUBG1P23258 451 aa18.77■□□□□ 0.6
C9orf3-222ENST00000496567 MMP16P51512 607 aa18.77■□□□□ 0.6
C9orf3-222ENST00000496567 ZNF121P58317 390 aaPredicted RBP18.77■□□□□ 0.6
C9orf3-222ENST00000496567 RPS23P62266 143 aaKnown RBP18.77■□□□□ 0.6
C9orf3-222ENST00000496567 MRPL28Q13084 256 aaKnown RBP18.77■□□□□ 0.6
C9orf3-222ENST00000496567 SNTB2Q13425 540 aaKnown RBP18.77■□□□□ 0.6
C9orf3-222ENST00000496567 KCTD21Q4G0X4 260 aa18.77■□□□□ 0.6
C9orf3-222ENST00000496567 NAA40Q86UY6 237 aa18.77■□□□□ 0.6
C9orf3-222ENST00000496567 ABHD4Q8TB40 342 aa18.77■□□□□ 0.6
C9orf3-222ENST00000496567 OR51B6Q9H340 312 aa18.77■□□□□ 0.6
C9orf3-222ENST00000496567 TUBG2Q9NRH3 451 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms