RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 MICAQ29983 383 aa13.3□□□□□ -0.28
HDAC4-213ENST00000496347 SLC35F1Q5T1Q4 408 aa13.3□□□□□ -0.28
HDAC4-213ENST00000496347 SHQ1Q6PI26 577 aaKnown RBP13.3□□□□□ -0.28
HDAC4-213ENST00000496347 Q6ZR03 302 aa13.3□□□□□ -0.28
HDAC4-213ENST00000496347 LINC00346Q8IVM7 164 aa13.3□□□□□ -0.28
HDAC4-213ENST00000496347 PHC2Q8IXK0 858 aa13.3□□□□□ -0.28
HDAC4-213ENST00000496347 ZNF283Q8N7M2 679 aa13.3□□□□□ -0.28
HDAC4-213ENST00000496347 OR2T33Q8NG76 320 aa13.3□□□□□ -0.28
HDAC4-213ENST00000496347 OR4M2Q8NGB6 313 aa13.3□□□□□ -0.28
HDAC4-213ENST00000496347 CDADC1Q9BWV3 514 aa13.3□□□□□ -0.28
HDAC4-213ENST00000496347 C1QTNF5Q9BXJ0 243 aa13.3□□□□□ -0.28
HDAC4-213ENST00000496347 PNRC2Q9NPJ4 139 aaKnown RBP13.3□□□□□ -0.28
HDAC4-213ENST00000496347 DDX28Q9NUL7 540 aaKnown RBP13.3□□□□□ -0.28
HDAC4-213ENST00000496347 TMEM106BQ9NUM4 274 aa13.3□□□□□ -0.28
HDAC4-213ENST00000496347 MRPL22Q9NWU5 206 aaKnown RBP13.3□□□□□ -0.28
HDAC4-213ENST00000496347 VNN3Q9NY84 501 aa13.3□□□□□ -0.28
HDAC4-213ENST00000496347 PTTG3PQ9NZH4 202 aa13.3□□□□□ -0.28
HDAC4-213ENST00000496347 IQCF6A8MYZ5 107 aa13.29□□□□□ -0.28
HDAC4-213ENST00000496347 IFNL4K9M1U5 179 aa13.29□□□□□ -0.28
HDAC4-213ENST00000496347 GASTP01350 101 aa13.29□□□□□ -0.28
HDAC4-213ENST00000496347 IGHV2-70P01814 119 aa13.29□□□□□ -0.28
HDAC4-213ENST00000496347 ACSM4P0C7M7 580 aa13.29□□□□□ -0.28
HDAC4-213ENST00000496347 ZNF823P16415 610 aa13.29□□□□□ -0.28
HDAC4-213ENST00000496347 SELEP16581 610 aa13.29□□□□□ -0.28
HDAC4-213ENST00000496347 GATA3P23771 443 aa13.29□□□□□ -0.28
HDAC4-213ENST00000496347 HLXQ14774 488 aaPredicted RBP13.29□□□□□ -0.28
HDAC4-213ENST00000496347 SLC27A4Q6P1M0 643 aa13.29□□□□□ -0.28
HDAC4-213ENST00000496347 SPICQ8N5J4 248 aa13.29□□□□□ -0.28
HDAC4-213ENST00000496347 CYB561A3Q8NBI2 242 aa13.29□□□□□ -0.28
HDAC4-213ENST00000496347 SLC37A3Q8NCC5 494 aa13.29□□□□□ -0.28
HDAC4-213ENST00000496347 OR13G1Q8NGZ3 307 aa13.29□□□□□ -0.28
HDAC4-213ENST00000496347 ZNF582Q96NG8 517 aaPredicted RBP13.29□□□□□ -0.28
HDAC4-213ENST00000496347 OR2V2Q96R30 315 aa13.29□□□□□ -0.28
HDAC4-213ENST00000496347 DDOQ99489 341 aa13.29□□□□□ -0.28
HDAC4-213ENST00000496347 RBM4Q9BWF3 364 aaKnown RBP13.29□□□□□ -0.28
HDAC4-213ENST00000496347 HCAR1Q9BXC0 346 aa13.29□□□□□ -0.28
HDAC4-213ENST00000496347 G6PC2Q9NQR9 355 aa13.29□□□□□ -0.28
HDAC4-213ENST00000496347 TAS2R1Q9NYW7 299 aa13.29□□□□□ -0.28
HDAC4-213ENST00000496347 NPTNQ9Y639 398 aa13.29□□□□□ -0.28
HDAC4-213ENST00000496347 COMMD3-BMI1R4GMX3 469 aa13.29□□□□□ -0.28
HDAC4-213ENST00000496347 U3KQV3 271 aa13.29□□□□□ -0.28
HDAC4-213ENST00000496347 A0A1B0GWJ7 208 aa13.28□□□□□ -0.28
HDAC4-213ENST00000496347 AQP12BA6NM10 295 aa13.28□□□□□ -0.28
HDAC4-213ENST00000496347 J3QLI3 93 aa13.28□□□□□ -0.28
HDAC4-213ENST00000496347 ACOT8O14734 319 aa13.28□□□□□ -0.28
HDAC4-213ENST00000496347 SOX14O95416 240 aa13.28□□□□□ -0.28
HDAC4-213ENST00000496347 IFNGP01579 166 aa13.28□□□□□ -0.28
HDAC4-213ENST00000496347 ZNF3P17036 446 aa13.28□□□□□ -0.28
HDAC4-213ENST00000496347 MMP16P51512 607 aa13.28□□□□□ -0.28
HDAC4-213ENST00000496347 SLC25A1P53007 311 aa13.28□□□□□ -0.28
HDAC4-213ENST00000496347 BTG1P62324 171 aa13.28□□□□□ -0.28
HDAC4-213ENST00000496347 KRTAP24-1Q3LI83 254 aa13.28□□□□□ -0.28
HDAC4-213ENST00000496347 DNAL1Q4LDG9 190 aa13.28□□□□□ -0.28
HDAC4-213ENST00000496347 TMEM155Q4W5P6 130 aa13.28□□□□□ -0.28
HDAC4-213ENST00000496347 SPRNQ5BIV9 151 aa13.28□□□□□ -0.28
HDAC4-213ENST00000496347 CD300LDQ6UXZ3 194 aa13.28□□□□□ -0.28
HDAC4-213ENST00000496347 TRPM8Q7Z2W7 1104 aa13.28□□□□□ -0.28
HDAC4-213ENST00000496347 AQP12AQ8IXF9 295 aa13.28□□□□□ -0.28
HDAC4-213ENST00000496347 ADGRG5Q8IZF4 528 aa13.28□□□□□ -0.28
HDAC4-213ENST00000496347 OR8G5Q8NG78 346 aa13.28□□□□□ -0.28
HDAC4-213ENST00000496347 OR10G2Q8NGC3 310 aa13.28□□□□□ -0.28
HDAC4-213ENST00000496347 ITLN1Q8WWA0 313 aa13.28□□□□□ -0.28
HDAC4-213ENST00000496347 SPTSSAQ969W0 71 aa13.28□□□□□ -0.28
HDAC4-213ENST00000496347 MAP6Q96JE9 813 aa13.28□□□□□ -0.28
HDAC4-213ENST00000496347 TSSK6Q9BXA6 273 aa13.28□□□□□ -0.28
HDAC4-213ENST00000496347 PPP1R3CQ9UQK1 317 aa13.28□□□□□ -0.28
HDAC4-213ENST00000496347 DHRS12A0PJE2 317 aa13.27□□□□□ -0.29
HDAC4-213ENST00000496347 RIIAD1A6NNX1 92 aa13.27□□□□□ -0.29
HDAC4-213ENST00000496347 F5H5K5 113 aa13.27□□□□□ -0.29
HDAC4-213ENST00000496347 M0R135 149 aa13.27□□□□□ -0.29
HDAC4-213ENST00000496347 TCF21O43680 179 aa13.27□□□□□ -0.29
HDAC4-213ENST00000496347 PLPP2O43688 288 aa13.27□□□□□ -0.29
HDAC4-213ENST00000496347 OTX1P32242 354 aaPredicted RBP13.27□□□□□ -0.29
HDAC4-213ENST00000496347 PYCR1P32322 319 aa13.27□□□□□ -0.29
HDAC4-213ENST00000496347 SRP9P49458 86 aaKnown RBP13.27□□□□□ -0.29
HDAC4-213ENST00000496347 BLVRAP53004 296 aa13.27□□□□□ -0.29
HDAC4-213ENST00000496347 TPTEP56180 551 aa13.27□□□□□ -0.29
HDAC4-213ENST00000496347 DBPQ10586 325 aaPredicted RBP13.27□□□□□ -0.29
HDAC4-213ENST00000496347 MALLQ13021 153 aa13.27□□□□□ -0.29
HDAC4-213ENST00000496347 CRMP1Q14194 572 aa13.27□□□□□ -0.29
HDAC4-213ENST00000496347 PCK2Q16822 640 aa13.27□□□□□ -0.29
HDAC4-213ENST00000496347 RSPO1Q2MKA7 263 aaPredicted RBP13.27□□□□□ -0.29
HDAC4-213ENST00000496347 ZNF362Q5T0B9 420 aaPredicted RBP13.27□□□□□ -0.29
HDAC4-213ENST00000496347 LIPNQ5VXI9 398 aa13.27□□□□□ -0.29
HDAC4-213ENST00000496347 OR2T2Q6IF00 324 aa13.27□□□□□ -0.29
HDAC4-213ENST00000496347 OR5AS1Q8N127 324 aa13.27□□□□□ -0.29
HDAC4-213ENST00000496347 MUC20Q8N307 709 aaPredicted RBP13.27□□□□□ -0.29
HDAC4-213ENST00000496347 KLHL36Q8N4N3 616 aa13.27□□□□□ -0.29
HDAC4-213ENST00000496347 OR10AD1Q8NGE0 317 aa13.27□□□□□ -0.29
HDAC4-213ENST00000496347 OR4Q3Q8NH05 313 aa13.27□□□□□ -0.29
HDAC4-213ENST00000496347 TEX47Q8TBZ9 253 aa13.27□□□□□ -0.29
HDAC4-213ENST00000496347 ZNF799Q96GE5 643 aa13.27□□□□□ -0.29
HDAC4-213ENST00000496347 CLPTM1LQ96KA5 538 aa13.27□□□□□ -0.29
HDAC4-213ENST00000496347 SIGLEC11Q96RL6 698 aa13.27□□□□□ -0.29
HDAC4-213ENST00000496347 SLC30A2Q9BRI3 323 aa13.27□□□□□ -0.29
HDAC4-213ENST00000496347 NMNAT2Q9BZQ4 307 aa13.27□□□□□ -0.29
HDAC4-213ENST00000496347 ARMC1Q9NVT9 282 aa13.27□□□□□ -0.29
HDAC4-213ENST00000496347 PPIAL4EA0A075B759 164 aa13.26□□□□□ -0.29
HDAC4-213ENST00000496347 PPIAL4CA0A0B4J2A2 164 aa13.26□□□□□ -0.29
HDAC4-213ENST00000496347 PPIAL4DF5H284 164 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms