RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 ARHGAP24Q8N264 748 aa10.75□□□□□ -0.69
PTPRF-214ENST00000496043 SDR9C7Q8NEX9 313 aa10.75□□□□□ -0.69
PTPRF-214ENST00000496043 OR52L1Q8NGH7 329 aa10.75□□□□□ -0.69
PTPRF-214ENST00000496043 ZFAND2BQ8WV99 257 aa10.75□□□□□ -0.69
PTPRF-214ENST00000496043 OR2V2Q96R30 315 aa10.75□□□□□ -0.69
PTPRF-214ENST00000496043 CCT8L2Q96SF2 557 aa10.75□□□□□ -0.69
PTPRF-214ENST00000496043 HCAR1Q9BXC0 346 aa10.75□□□□□ -0.69
PTPRF-214ENST00000496043 C1QTNF5Q9BXJ0 243 aa10.75□□□□□ -0.69
PTPRF-214ENST00000496043 PATZ1Q9HBE1 687 aaKnown RBP10.75□□□□□ -0.69
PTPRF-214ENST00000496043 TMEM100Q9NV29 134 aa10.75□□□□□ -0.69
PTPRF-214ENST00000496043 DCAF16Q9NXF7 216 aa10.75□□□□□ -0.69
PTPRF-214ENST00000496043 CYB5R1Q9UHQ9 305 aa10.75□□□□□ -0.69
PTPRF-214ENST00000496043 KCNG2Q9UJ96 466 aa10.75□□□□□ -0.69
PTPRF-214ENST00000496043 LYVE1Q9Y5Y7 322 aa10.75□□□□□ -0.69
PTPRF-214ENST00000496043 PPIAL4EA0A075B759 164 aa10.74□□□□□ -0.69
PTPRF-214ENST00000496043 PPIAL4CA0A0B4J2A2 164 aa10.74□□□□□ -0.69
PTPRF-214ENST00000496043 IQCF6A8MYZ5 107 aa10.74□□□□□ -0.69
PTPRF-214ENST00000496043 PPIAL4DF5H284 164 aa10.74□□□□□ -0.69
PTPRF-214ENST00000496043 TMEM178BH3BS89 294 aa10.74□□□□□ -0.69
PTPRF-214ENST00000496043 CCNB2O95067 398 aa10.74□□□□□ -0.69
PTPRF-214ENST00000496043 LCATP04180 440 aa10.74□□□□□ -0.69
PTPRF-214ENST00000496043 ACSM4P0C7M7 580 aa10.74□□□□□ -0.69
PTPRF-214ENST00000496043 PPIAL4FP0DN26 164 aa10.74□□□□□ -0.69
PTPRF-214ENST00000496043 EPHA1P21709 976 aa10.74□□□□□ -0.69
PTPRF-214ENST00000496043 ZFP36P26651 326 aaKnown RBP10.74□□□□□ -0.69
PTPRF-214ENST00000496043 TPTEP56180 551 aa10.74□□□□□ -0.69
PTPRF-214ENST00000496043 BTG1P62324 171 aa10.74□□□□□ -0.69
PTPRF-214ENST00000496043 MALLQ13021 153 aa10.74□□□□□ -0.69
PTPRF-214ENST00000496043 KRTAP27-1Q3LI81 207 aa10.74□□□□□ -0.69
PTPRF-214ENST00000496043 RASSF6Q6ZTQ3 369 aa10.74□□□□□ -0.69
PTPRF-214ENST00000496043 USP43Q70EL4 1123 aa10.74□□□□□ -0.69
PTPRF-214ENST00000496043 DHFR2Q86XF0 187 aa10.74□□□□□ -0.69
PTPRF-214ENST00000496043 FITM2Q8N6M3 262 aa10.74□□□□□ -0.69
PTPRF-214ENST00000496043 POP5Q969H6 163 aaKnown RBP10.74□□□□□ -0.69
PTPRF-214ENST00000496043 JMJD8Q96S16 334 aa10.74□□□□□ -0.69
PTPRF-214ENST00000496043 DDOQ99489 341 aa10.74□□□□□ -0.69
PTPRF-214ENST00000496043 ATF6BQ99941 703 aa10.74□□□□□ -0.69
PTPRF-214ENST00000496043 SLC30A2Q9BRI3 323 aa10.74□□□□□ -0.69
PTPRF-214ENST00000496043 MUC13Q9H3R2 512 aa10.74□□□□□ -0.69
PTPRF-214ENST00000496043 FN3KQ9H479 309 aa10.74□□□□□ -0.69
PTPRF-214ENST00000496043 EGLN3Q9H6Z9 239 aa10.74□□□□□ -0.69
PTPRF-214ENST00000496043 GCM1Q9NP62 436 aa10.74□□□□□ -0.69
PTPRF-214ENST00000496043 IL20Q9NYY1 176 aa10.74□□□□□ -0.69
PTPRF-214ENST00000496043 CDH10Q9Y6N8 788 aa10.74□□□□□ -0.69
PTPRF-214ENST00000496043 H0YL77 283 aa10.73□□□□□ -0.69
PTPRF-214ENST00000496043 BHLHE40O14503 412 aa10.73□□□□□ -0.69
PTPRF-214ENST00000496043 DYNC1I1O14576 645 aa10.73□□□□□ -0.69
PTPRF-214ENST00000496043 CPT2P23786 658 aa10.73□□□□□ -0.69
PTPRF-214ENST00000496043 FPR2P25090 351 aa10.73□□□□□ -0.69
PTPRF-214ENST00000496043 GGT2P36268 569 aa10.73□□□□□ -0.69
PTPRF-214ENST00000496043 MDH2P40926 338 aaKnown RBP10.73□□□□□ -0.69
PTPRF-214ENST00000496043 MAGEA2P43356 314 aa10.73□□□□□ -0.69
PTPRF-214ENST00000496043 SLC6A9P48067 706 aa10.73□□□□□ -0.69
PTPRF-214ENST00000496043 DBPQ10586 325 aaPredicted RBP10.73□□□□□ -0.69
PTPRF-214ENST00000496043 TRAP1Q12931 704 aaKnown RBP10.73□□□□□ -0.69
PTPRF-214ENST00000496043 TRIM25Q14258 630 aaKnown RBP10.73□□□□□ -0.69
PTPRF-214ENST00000496043 ZMYND11Q15326 602 aa10.73□□□□□ -0.69
PTPRF-214ENST00000496043 CFAP77Q6ZQR2 320 aa10.73□□□□□ -0.69
PTPRF-214ENST00000496043 NAA40Q86UY6 237 aa10.73□□□□□ -0.69
PTPRF-214ENST00000496043 MUC20Q8N307 709 aaPredicted RBP10.73□□□□□ -0.69
PTPRF-214ENST00000496043 PROKR2Q8NFJ6 384 aa10.73□□□□□ -0.69
PTPRF-214ENST00000496043 OR9Q2Q8NGE9 314 aa10.73□□□□□ -0.69
PTPRF-214ENST00000496043 OR4C15Q8NGM1 316 aa10.73□□□□□ -0.69
PTPRF-214ENST00000496043 OR2T4Q8NH00 348 aa10.73□□□□□ -0.69
PTPRF-214ENST00000496043 SPTSSAQ969W0 71 aa10.73□□□□□ -0.69
PTPRF-214ENST00000496043 SLCO4A1Q96BD0 722 aa10.73□□□□□ -0.69
PTPRF-214ENST00000496043 MEGF10Q96KG7 1140 aa10.73□□□□□ -0.69
PTPRF-214ENST00000496043 MAGIXQ9H6Y5 334 aa10.73□□□□□ -0.69
PTPRF-214ENST00000496043 WDR76Q9H967 626 aa10.73□□□□□ -0.69
PTPRF-214ENST00000496043 MRPL22Q9NWU5 206 aaKnown RBP10.73□□□□□ -0.69
PTPRF-214ENST00000496043 POLR3KQ9Y2Y1 108 aaPredicted RBP10.73□□□□□ -0.69
PTPRF-214ENST00000496043 TCRBV5S2A0A599 114 aa10.72□□□□□ -0.69
PTPRF-214ENST00000496043 LRRC30A6NM36 301 aa10.72□□□□□ -0.69
PTPRF-214ENST00000496043 TRIM77I1YAP6 450 aa10.72□□□□□ -0.69
PTPRF-214ENST00000496043 ADRA2CP18825 462 aa10.72□□□□□ -0.69
PTPRF-214ENST00000496043 ATP6V1B2P21281 511 aa10.72□□□□□ -0.69
PTPRF-214ENST00000496043 PYCR1P32322 319 aa10.72□□□□□ -0.69
PTPRF-214ENST00000496043 RBMXP38159 391 aaKnown RBP10.72□□□□□ -0.69
PTPRF-214ENST00000496043 MS4A2Q01362 244 aa10.72□□□□□ -0.69
PTPRF-214ENST00000496043 PPP1R8Q12972 351 aaKnown RBP10.72□□□□□ -0.69
PTPRF-214ENST00000496043 HNRNPA0Q13151 305 aaKnown RBP10.72□□□□□ -0.69
PTPRF-214ENST00000496043 GK2Q14410 553 aaPredicted RBP10.72□□□□□ -0.69
PTPRF-214ENST00000496043 MICAQ29983 383 aa10.72□□□□□ -0.69
PTPRF-214ENST00000496043 FAM98BQ52LJ0 330 aaKnown RBP10.72□□□□□ -0.69
PTPRF-214ENST00000496043 ZNF362Q5T0B9 420 aaPredicted RBP10.72□□□□□ -0.69
PTPRF-214ENST00000496043 OR2T5Q6IEZ7 315 aa10.72□□□□□ -0.69
PTPRF-214ENST00000496043 ZNF770Q6IQ21 691 aaPredicted RBP10.72□□□□□ -0.69
PTPRF-214ENST00000496043 PGAP1Q75T13 922 aa10.72□□□□□ -0.69
PTPRF-214ENST00000496043 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.72□□□□□ -0.69
PTPRF-214ENST00000496043 CYB561A3Q8NBI2 242 aa10.72□□□□□ -0.69
PTPRF-214ENST00000496043 BHLHE23Q8NDY6 225 aa10.72□□□□□ -0.69
PTPRF-214ENST00000496043 OR10AD1Q8NGE0 317 aa10.72□□□□□ -0.69
PTPRF-214ENST00000496043 OR2T29Q8NH02 315 aa10.72□□□□□ -0.69
PTPRF-214ENST00000496043 SIGLEC11Q96RL6 698 aa10.72□□□□□ -0.69
PTPRF-214ENST00000496043 BTBD10Q9BSF8 475 aa10.72□□□□□ -0.69
PTPRF-214ENST00000496043 SUCNR1Q9BXA5 334 aa10.72□□□□□ -0.69
PTPRF-214ENST00000496043 TSSK6Q9BXA6 273 aa10.72□□□□□ -0.69
PTPRF-214ENST00000496043 TMEM165Q9HC07 324 aa10.72□□□□□ -0.69
PTPRF-214ENST00000496043 PNRC2Q9NPJ4 139 aaKnown RBP10.72□□□□□ -0.69
PTPRF-214ENST00000496043 OPN4Q9UHM6 478 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms