RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 OR1P1Q8NH06 330 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 ZNF480Q8WV37 535 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 TAAR8Q969N4 342 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 FAM3DQ96BQ1 224 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 BOD1Q96IK1 185 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 ZNF2Q9BSG1 426 aaPredicted RBP4.3□□□□□ -1.72
PRKD3-210ENST00000494667 SUCNR1Q9BXA5 334 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 CNTNAP3Q9BZ76 1288 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 ZNF350Q9GZX5 532 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 LPAR2Q9HBW0 351 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 KIAA1456Q9P272 454 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 SLC7A7Q9UM01 511 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 GPR132Q9UNW8 380 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 TIMM13Q9Y5L4 95 aaPredicted RBP4.3□□□□□ -1.72
PRKD3-210ENST00000494667 TRAV18A0A075B6X5 111 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 TRAV1-1A0A0B4J248 108 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 PEX12O00623 359 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 CCSO14618 274 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 LDB3O75112 727 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 ALOX12BO75342 701 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 SRP19P09132 144 aaKnown RBP4.3□□□□□ -1.72
PRKD3-210ENST00000494667 SMIM10L2AP0DMW4 78 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 SMIM10L2BP0DMW5 78 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 LIPCP11150 499 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 AKR1C3P42330 323 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 TSFMP43897 325 aaKnown RBP4.3□□□□□ -1.72
PRKD3-210ENST00000494667 GABRA4P48169 554 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 SPINT3P49223 89 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 ZNF674Q2M3X9 581 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 DUSP28Q4G0W2 176 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 GPR157Q5UAW9 335 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 SDHAF4Q5VUM1 108 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.3□□□□□ -1.72
PRKD3-210ENST00000494667 ADIPOR2Q86V24 386 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 LHFPL1Q86WI0 220 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 CDC20BQ86Y33 519 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 C1orf87Q8N0U7 546 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 ARL14Q8N4G2 192 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 OR2D3Q8NGH3 330 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 LIPHQ8WWY8 451 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 RAB39BQ96DA2 213 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 SEC22AQ96IW7 307 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 OR7D2Q96RA2 312 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 INTS14Q96SY0 518 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 MEMO1Q9Y316 297 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 LOC100509620A0A075B734 347 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 A0A0G2JLL6 359 aaPredicted RBP4.3□□□□□ -1.72
PRKD3-210ENST00000494667 TCRBV21S2A2A0A5A6 115 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 NKX6-3A6NJ46 265 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 CYTIPO60759 359 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 DEDDO75618 318 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 RPP14O95059 124 aaKnown RBP4.3□□□□□ -1.72
PRKD3-210ENST00000494667 TXNDC12O95881 172 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 FPR2P25090 351 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 THPOP40225 353 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 CCL23P55773 120 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 KLF3P57682 345 aaPredicted RBP4.3□□□□□ -1.72
PRKD3-210ENST00000494667 RHOAP61586 193 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 RANP62826 216 aaKnown RBP4.3□□□□□ -1.72
PRKD3-210ENST00000494667 SPEM2Q0P670 501 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 LASP1Q14847 261 aaKnown RBP4.3□□□□□ -1.72
PRKD3-210ENST00000494667 HERPUD1Q15011 391 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 C2orf76Q3KRA6 126 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 FNDC3BQ53EP0 1204 aaKnown RBP4.3□□□□□ -1.72
PRKD3-210ENST00000494667 ZNF529Q6P280 563 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 LEG1Q6P5S2 330 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 ZNF836Q6ZNA1 936 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 NUP54Q7Z3B4 507 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 PRRT2Q7Z6L0 340 aaPredicted RBP4.3□□□□□ -1.72
PRKD3-210ENST00000494667 ADGRE4PQ86SQ3 457 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 TMPRSS12Q86WS5 348 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 ZNF280BQ86YH2 543 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 FAM71E2Q8N5Q1 922 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 OR4S1Q8NGB4 309 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 OR14C36Q8NHC7 312 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 HOXB13Q92826 284 aaPredicted RBP4.3□□□□□ -1.72
PRKD3-210ENST00000494667 TMEM106AQ96A25 262 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 TMEM230Q96A57 120 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 TVP23CQ96ET8 276 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 ADAD1Q96M93 576 aaKnown RBP4.3□□□□□ -1.72
PRKD3-210ENST00000494667 SCGB3A2Q96PL1 93 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 INSM2Q96T92 566 aaPredicted RBP4.3□□□□□ -1.72
PRKD3-210ENST00000494667 METTL8Q9H825 291 aaKnown RBP4.3□□□□□ -1.72
PRKD3-210ENST00000494667 SEPSECSQ9HD40 501 aaKnown RBP4.3□□□□□ -1.72
PRKD3-210ENST00000494667 FRRS1LQ9P0K9 344 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 CES1P1Q9UKY3 287 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 SH2B3Q9UQQ2 575 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 LTBP3Q9NS15 1303 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 TRAV8-7A0A075B6U6 113 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 TRAV39A0A0B4J263 110 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 NPIPB15A6NHN6 443 aaPredicted RBP4.3□□□□□ -1.72
PRKD3-210ENST00000494667 FTCDNL1E5RQL4 147 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 H3BQ15 152 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 K7EPK0 472 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 YPEL1O60688 119 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 OPN1MWP04001 364 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 TYMSP04818 313 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 RPLP2P05387 115 aaKnown RBP4.3□□□□□ -1.72
PRKD3-210ENST00000494667 OPN1MW2P0DN77 364 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 OPN1MW3P0DN78 364 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms