RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 AURKCQ9UQB9 309 aa8.05□□□□□ -1.12
UBR4-216ENST00000494503 A0A087WUU8 490 aa8.04□□□□□ -1.12
UBR4-216ENST00000494503 HMGB1P1B2RPK0 211 aaPredicted RBP8.04□□□□□ -1.12
UBR4-216ENST00000494503 SRRM5B3KS81 715 aa8.04□□□□□ -1.12
UBR4-216ENST00000494503 C3orf80F5H4A9 247 aa8.04□□□□□ -1.12
UBR4-216ENST00000494503 M0QZ24 198 aa8.04□□□□□ -1.12
UBR4-216ENST00000494503 IMPA2O14732 288 aa8.04□□□□□ -1.12
UBR4-216ENST00000494503 NDUFB2O95178 105 aa8.04□□□□□ -1.12
UBR4-216ENST00000494503 PLATP00750 562 aa8.04□□□□□ -1.12
UBR4-216ENST00000494503 SERPINA1P01009 418 aa8.04□□□□□ -1.12
UBR4-216ENST00000494503 SDHAP31040 664 aa8.04□□□□□ -1.12
UBR4-216ENST00000494503 MALLQ13021 153 aa8.04□□□□□ -1.12
UBR4-216ENST00000494503 KLF10Q13118 480 aa8.04□□□□□ -1.12
UBR4-216ENST00000494503 ZNF404Q494X3 552 aa8.04□□□□□ -1.12
UBR4-216ENST00000494503 CCDC92Q53HC0 331 aaPredicted RBP8.04□□□□□ -1.12
UBR4-216ENST00000494503 PRAMEF6Q5VXH4 476 aa8.04□□□□□ -1.12
UBR4-216ENST00000494503 SFRP4Q6FHJ7 346 aaPredicted RBP8.04□□□□□ -1.12
UBR4-216ENST00000494503 DNM1P34Q6PK57 102 aa8.04□□□□□ -1.12
UBR4-216ENST00000494503 LYPD2Q6UXB3 125 aa8.04□□□□□ -1.12
UBR4-216ENST00000494503 C9orf139Q6ZV77 190 aa8.04□□□□□ -1.12
UBR4-216ENST00000494503 MRPL21Q7Z2W9 205 aaKnown RBP8.04□□□□□ -1.12
UBR4-216ENST00000494503 LINC00346Q8IVM7 164 aa8.04□□□□□ -1.12
UBR4-216ENST00000494503 PDZD9Q8IXQ8 264 aa8.04□□□□□ -1.12
UBR4-216ENST00000494503 GJC3Q8NFK1 279 aa8.04□□□□□ -1.12
UBR4-216ENST00000494503 WFDC12Q8WWY7 111 aa8.04□□□□□ -1.12
UBR4-216ENST00000494503 STON2Q8WXE9 905 aa8.04□□□□□ -1.12
UBR4-216ENST00000494503 RCN3Q96D15 328 aa8.04□□□□□ -1.12
UBR4-216ENST00000494503 HSH2DQ96JZ2 352 aa8.04□□□□□ -1.12
UBR4-216ENST00000494503 PITX2Q99697 317 aa8.04□□□□□ -1.12
UBR4-216ENST00000494503 CHIAQ9BZP6 476 aa8.04□□□□□ -1.12
UBR4-216ENST00000494503 NUAK2Q9H093 628 aa8.04□□□□□ -1.12
UBR4-216ENST00000494503 KRCC1Q9NPI7 259 aaPredicted RBP8.04□□□□□ -1.12
UBR4-216ENST00000494503 TMCC3Q9ULS5 477 aa8.04□□□□□ -1.12
UBR4-216ENST00000494503 TMEM5Q9Y2B1 443 aa8.04□□□□□ -1.12
UBR4-216ENST00000494503 FAM32AQ9Y421 112 aaKnown RBP8.04□□□□□ -1.12
UBR4-216ENST00000494503 IER3IP1Q9Y5U9 82 aa8.04□□□□□ -1.12
UBR4-216ENST00000494503 KIR2DS1A0A191URI9 304 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 A0A1B0GUS0 222 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 hCG_1807616A0A1W2PRN6 198 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 A6NLC8 198 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 CXCR6O00574 342 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 PHYHO14832 338 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 FFAR1O14842 300 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 TIMM23O14925 209 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 MLNRO43193 412 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 AHCYL1O43865 530 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 TOX4O94842 621 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 PPP1R3DO95685 299 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 NPPAP01160 153 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 LCATP04180 440 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 SFTPBP07988 381 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 PPIAL4GP0DN37 164 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 RPS6KA3P51812 740 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 LSM6P62312 80 aaKnown RBP8.03□□□□□ -1.12
UBR4-216ENST00000494503 HOXA4Q00056 320 aaPredicted RBP8.03□□□□□ -1.12
UBR4-216ENST00000494503 OR8G1Q15617 311 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 KCNJ8Q15842 424 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 COQ5Q5HYK3 327 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 ZNF362Q5T0B9 420 aaPredicted RBP8.03□□□□□ -1.12
UBR4-216ENST00000494503 METTL11BQ5VVY1 283 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 WDR25Q64LD2 544 aaPredicted RBP8.03□□□□□ -1.12
UBR4-216ENST00000494503 OLFML2AQ68BL7 652 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 GPR139Q6DWJ6 353 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 FBXW12Q6X9E4 464 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 DCDC5Q6ZRR9 648 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 PGAP1Q75T13 922 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 ADCK1Q86TW2 530 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 RNF113BQ8IZP6 322 aaKnown RBP8.03□□□□□ -1.12
UBR4-216ENST00000494503 FITM2Q8N6M3 262 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 OR2AJ1Q8NGZ0 328 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 GATAD2BQ8WXI9 593 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 RSRC1Q96IZ7 334 aaKnown RBP8.03□□□□□ -1.12
UBR4-216ENST00000494503 TSSK2Q96PF2 358 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 PKP2Q99959 881 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 HDHD2Q9H0R4 259 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 NMNAT1Q9HAN9 279 aaPredicted RBP8.03□□□□□ -1.12
UBR4-216ENST00000494503 SRA1Q9HD15 236 aaKnown RBP8.03□□□□□ -1.12
UBR4-216ENST00000494503 MRGBPQ9NV56 204 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 PDP1Q9P0J1 537 aaPredicted RBP8.03□□□□□ -1.12
UBR4-216ENST00000494503 GMPR2Q9P2T1 348 aaKnown RBP8.03□□□□□ -1.12
UBR4-216ENST00000494503 ERVK-18Q9QC07 812 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 N6AMT1Q9Y5N5 214 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 CAPN7Q9Y6W3 813 aa8.03□□□□□ -1.12
UBR4-216ENST00000494503 VWFP04275 2813 aa8.02□□□□□ -1.13
UBR4-216ENST00000494503 UNC119BA6NIH7 251 aa8.02□□□□□ -1.13
UBR4-216ENST00000494503 IQCF6A8MYZ5 107 aa8.02□□□□□ -1.13
UBR4-216ENST00000494503 C22orf46C9J442 243 aa8.02□□□□□ -1.13
UBR4-216ENST00000494503 J3QW42 95 aa8.02□□□□□ -1.13
UBR4-216ENST00000494503 ADAM20O43506 726 aa8.02□□□□□ -1.13
UBR4-216ENST00000494503 FAM20BO75063 409 aa8.02□□□□□ -1.13
UBR4-216ENST00000494503 RENP00797 406 aa8.02□□□□□ -1.13
UBR4-216ENST00000494503 H1F0P07305 194 aaKnown RBP8.02□□□□□ -1.13
UBR4-216ENST00000494503 ZNF26P17031 533 aaPredicted RBP8.02□□□□□ -1.13
UBR4-216ENST00000494503 CA6P23280 308 aa8.02□□□□□ -1.13
UBR4-216ENST00000494503 NOS3P29474 1203 aa8.02□□□□□ -1.13
UBR4-216ENST00000494503 CRABP1P29762 137 aa8.02□□□□□ -1.13
UBR4-216ENST00000494503 GGT2P36268 569 aa8.02□□□□□ -1.13
UBR4-216ENST00000494503 PAX2Q02962 417 aa8.02□□□□□ -1.13
UBR4-216ENST00000494503 LIPEQ05469 1076 aa8.02□□□□□ -1.13
UBR4-216ENST00000494503 FHL1Q13642 323 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms