RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 LAX1Q8IWV1 398 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 SLC22A24Q8N4F4 322 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 ZNF676Q8N7Q3 588 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 GDPD1Q8N9F7 314 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 OR2AJ1Q8NGZ0 328 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 TMEM106AQ96A25 262 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 SLC25A28Q96A46 364 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 SARAFQ96BY9 339 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 ZNF75AQ96N20 296 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 FOXB1Q99853 325 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 KCNS3Q9BQ31 491 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 RBM24Q9BX46 236 aaKnown RBP5.95□□□□□ -1.46
MSH5-217ENST00000494458 C6orf62Q9GZU0 229 aaPredicted RBP5.95□□□□□ -1.46
MSH5-217ENST00000494458 PBOV1Q9GZY1 135 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 HDHD2Q9H0R4 259 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 ABCG5Q9H222 651 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 EXO5Q9H790 373 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 NPDC1Q9NQX5 325 aaPredicted RBP5.95□□□□□ -1.46
MSH5-217ENST00000494458 B3GNT2Q9NY97 397 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 RABL2AQ9UBK7 228 aaPredicted RBP5.95□□□□□ -1.46
MSH5-217ENST00000494458 HHLA2Q9UM44 414 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 RABL2BQ9UNT1 228 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 EMC9Q9Y3B6 208 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 TIMM10BQ9Y5J6 103 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 V9GY05 133 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 CFAP47Q6ZTR5 3102 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 CELSR3Q9NYQ7 3312 aa5.95□□□□□ -1.46
MSH5-217ENST00000494458 MBD3L4A6NDZ8 208 aaPredicted RBP5.94□□□□□ -1.46
MSH5-217ENST00000494458 MBD3L3A6NE82 208 aaPredicted RBP5.94□□□□□ -1.46
MSH5-217ENST00000494458 MBD3L5A6NJ08 208 aaPredicted RBP5.94□□□□□ -1.46
MSH5-217ENST00000494458 SLC22A20A6NK97 555 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 E9PLN8 166 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 TFECO14948 347 aaPredicted RBP5.94□□□□□ -1.46
MSH5-217ENST00000494458 LDLRAD4O15165 306 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 ICMTO60725 284 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 NCR1O76036 304 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 IL18BPO95998 194 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 CGAP01215 116 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 ALDOBP05062 364 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 CRHP06850 196 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 ELK1P19419 428 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 ANOS1P23352 680 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 AGTR1P30556 359 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 UCNP55089 124 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 PCBD1P61457 104 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 PSG4Q00888 419 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 SRYQ05066 204 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 SCRN3Q0VDG4 424 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 KRTCAP3Q53RY4 240 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 SPANXN2Q5MJ10 180 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 C1orf100Q5SVJ3 147 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 NSUN5P2Q63ZY6 315 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 DRAM2Q6UX65 266 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 ZNF813Q6ZN06 617 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 FAM214BQ7L5A3 538 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 NUFIP2Q7Z417 695 aaKnown RBP5.94□□□□□ -1.46
MSH5-217ENST00000494458 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.94□□□□□ -1.46
MSH5-217ENST00000494458 LYSMD2Q8IV50 215 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 SKA3Q8IX90 412 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 OR8B12Q8NGG6 310 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 OR14K1Q8NGZ2 314 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 MBD3L2Q8NHZ7 208 aaPredicted RBP5.94□□□□□ -1.46
MSH5-217ENST00000494458 FGFBP3Q8TAT2 258 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 SPSB4Q96A44 273 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 C10orf35Q96D05 121 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 GPR137Q96N19 417 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 OR2H1Q9GZK4 316 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 WNT5BQ9H1J7 359 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 LDAHQ9H6V9 325 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 PLSCR4Q9NRQ2 329 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 CENPMQ9NSP4 180 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 FBLN5Q9UBX5 448 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 TUBD1Q9UJT1 453 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 V9GYS6 101 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 APC2O95996 2303 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 PHF3Q92576 2039 aaKnown RBP5.94□□□□□ -1.46
MSH5-217ENST00000494458 DNAJC13O75165 2243 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 CACNA1CQ13936 2221 aa5.94□□□□□ -1.46
MSH5-217ENST00000494458 CACNA1GO43497 2377 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 LOC107986453A0A1B0GWG9 222 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 A0A1W2PPK0 400 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 FAM181BA6NEQ2 426 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 MKRN2OSH3BPM6 223 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 SLC17A2O00624 439 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 CTDSPLO15194 276 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 SGCEO43556 437 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 CRYABP02511 175 aaKnown RBP5.93□□□□□ -1.46
MSH5-217ENST00000494458 ADRB1P08588 477 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 ITGA5P08648 1049 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 HOXD4P09016 255 aaPredicted RBP5.93□□□□□ -1.46
MSH5-217ENST00000494458 SLC2A2P11168 524 aaPredicted RBP5.93□□□□□ -1.46
MSH5-217ENST00000494458 ZNF32P17041 273 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 HSD11B1P28845 292 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 MPGP29372 298 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 PTGER4P35408 488 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 ALDH3B1P43353 468 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 NR4A2P43354 598 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 KIR2DL2P43627 348 aaPredicted RBP5.93□□□□□ -1.46
MSH5-217ENST00000494458 ZNF121P58317 390 aaPredicted RBP5.93□□□□□ -1.46
MSH5-217ENST00000494458 ARF1P84077 181 aaKnown RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms